RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 IGKV3OR2-268A0A0C4DH90 116 aa12.09□□□□□ -0.47
SMAD6-201ENST00000288840 PLNP26678 52 aa12.09□□□□□ -0.47
SMAD6-201ENST00000288840 F8VRH5 84 aa12.09□□□□□ -0.47
SMAD6-201ENST00000288840 TRAV2A0A0B4J234 112 aa12.08□□□□□ -0.48
SMAD6-201ENST00000288840 HOXA3O43365 443 aaPredicted RBP12.08□□□□□ -0.48
SMAD6-201ENST00000288840 DEFB131AP59861 70 aa12.08□□□□□ -0.48
SMAD6-201ENST00000288840 PGPEP1Q9NXJ5 209 aa12.08□□□□□ -0.48
SMAD6-201ENST00000288840 A0A087WX48 190 aa12.08□□□□□ -0.48
SMAD6-201ENST00000288840 IGHV3-16A0A0C4DH30 117 aa12.08□□□□□ -0.48
SMAD6-201ENST00000288840 RBAKDNA6NC62 111 aa12.08□□□□□ -0.48
SMAD6-201ENST00000288840 C9orf47Q6ZRZ4 202 aa12.08□□□□□ -0.48
SMAD6-201ENST00000288840 MAPKAPK5-AS1Q8N8E1 139 aa12.07□□□□□ -0.48
SMAD6-201ENST00000288840 PHLDA1Q8WV24 401 aaPredicted RBP12.07□□□□□ -0.48
SMAD6-201ENST00000288840 MRAP2Q96G30 205 aa12.07□□□□□ -0.48
SMAD6-201ENST00000288840 LINC01587Q99440 93 aa12.07□□□□□ -0.48
SMAD6-201ENST00000288840 A6NJY4 79 aa12.07□□□□□ -0.48
SMAD6-201ENST00000288840 HLA-DRB4P13762 266 aa12.07□□□□□ -0.48
SMAD6-201ENST00000288840 ADAMTSL5Q6ZMM2 481 aa12.07□□□□□ -0.48
SMAD6-201ENST00000288840 GATD1Q8NB37 220 aa12.07□□□□□ -0.48
SMAD6-201ENST00000288840 HLA-DRB4X5D2U9 266 aa12.07□□□□□ -0.48
SMAD6-201ENST00000288840 ADARB2-AS1A8MUL3 147 aa12.07□□□□□ -0.48
SMAD6-201ENST00000288840 OPRPNQ99935 248 aaPredicted RBP12.07□□□□□ -0.48
SMAD6-201ENST00000288840 K7EP34 96 aa12.06□□□□□ -0.48
SMAD6-201ENST00000288840 VCX2Q9H322 139 aa12.06□□□□□ -0.48
SMAD6-201ENST00000288840 TNFRSF18Q9Y5U5 241 aa12.06□□□□□ -0.48
SMAD6-201ENST00000288840 UBE2E2Q96LR5 201 aa12.06□□□□□ -0.48
SMAD6-201ENST00000288840 C10orf105Q8TEF2 133 aa12.06□□□□□ -0.48
SMAD6-201ENST00000288840 RAX2Q96IS3 184 aa12.06□□□□□ -0.48
SMAD6-201ENST00000288840 PRM2P04554 102 aa12.05□□□□□ -0.48
SMAD6-201ENST00000288840 FGF6P10767 208 aa12.05□□□□□ -0.48
SMAD6-201ENST00000288840 SH2D6Q7Z4S9 175 aa12.05□□□□□ -0.48
SMAD6-201ENST00000288840 CEND1Q8N111 149 aa12.05□□□□□ -0.48
SMAD6-201ENST00000288840 TMEM190Q8WZ59 177 aa12.05□□□□□ -0.48
SMAD6-201ENST00000288840 MDFICQ9P1T7 246 aa12.05□□□□□ -0.48
SMAD6-201ENST00000288840 IGHV3-38A0A0C4DH36 116 aa12.05□□□□□ -0.48
SMAD6-201ENST00000288840 LINC01549A6NIU2 74 aa12.05□□□□□ -0.48
SMAD6-201ENST00000288840 SPXQ9BT56 116 aa12.05□□□□□ -0.48
SMAD6-201ENST00000288840 VCYO14598 125 aa12.05□□□□□ -0.48
SMAD6-201ENST00000288840 PPP1R17O96001 155 aa12.04□□□□□ -0.48
SMAD6-201ENST00000288840 IGHV3-53P01767 116 aa12.04□□□□□ -0.48
SMAD6-201ENST00000288840 U3KQK5 164 aa12.04□□□□□ -0.48
SMAD6-201ENST00000288840 AVPP01185 164 aa12.04□□□□□ -0.48
SMAD6-201ENST00000288840 OR5A1Q8NGJ0 315 aa12.04□□□□□ -0.48
SMAD6-201ENST00000288840 ZFAND2AQ8N6M9 145 aa12.04□□□□□ -0.48
SMAD6-201ENST00000288840 TCTEX1D4Q5JR98 221 aa12.03□□□□□ -0.48
SMAD6-201ENST00000288840 RASL10AQ92737 203 aa12.03□□□□□ -0.48
SMAD6-201ENST00000288840 MYMXA0A1B0GTQ4 84 aa12.03□□□□□ -0.48
SMAD6-201ENST00000288840 GAGE13Q4V321 117 aa12.03□□□□□ -0.48
SMAD6-201ENST00000288840 C12orf74Q32Q52 190 aa12.03□□□□□ -0.48
SMAD6-201ENST00000288840 IGHG2P01859 326 aa12.02□□□□□ -0.49
SMAD6-201ENST00000288840 CD28P10747 220 aa12.02□□□□□ -0.49
SMAD6-201ENST00000288840 TEX48A0A1B0GUV7 120 aa12.02□□□□□ -0.49
SMAD6-201ENST00000288840 SUMO4Q6EEV6 95 aa12.02□□□□□ -0.49
SMAD6-201ENST00000288840 WFDC2Q14508 124 aa12.01□□□□□ -0.49
SMAD6-201ENST00000288840 Q8N1Y9 231 aa12.01□□□□□ -0.49
SMAD6-201ENST00000288840 XCL2Q9UBD3 114 aa12.01□□□□□ -0.49
SMAD6-201ENST00000288840 SLURP1P55000 103 aa12□□□□□ -0.49
SMAD6-201ENST00000288840 NRACQ8N912 160 aa12□□□□□ -0.49
SMAD6-201ENST00000288840 GEMIN7Q9H840 131 aaKnown RBP12□□□□□ -0.49
SMAD6-201ENST00000288840 HOXD3P31249 432 aaPredicted RBP11.99□□□□□ -0.49
SMAD6-201ENST00000288840 HERV-K104P63124 156 aa11.99□□□□□ -0.49
SMAD6-201ENST00000288840 BAALCQ8WXS3 180 aa11.99□□□□□ -0.49
SMAD6-201ENST00000288840 MRPL53Q96EL3 112 aaKnown RBP11.99□□□□□ -0.49
SMAD6-201ENST00000288840 ZNF625Q96I27 306 aaPredicted RBP11.99□□□□□ -0.49
SMAD6-201ENST00000288840 LINC01356Q8N9X3 169 aa11.99□□□□□ -0.49
SMAD6-201ENST00000288840 IGHV1OR15-1A0A075B7D0 117 aa11.99□□□□□ -0.49
SMAD6-201ENST00000288840 SIVA1O15304 175 aa11.99□□□□□ -0.49
SMAD6-201ENST00000288840 APRG1Q8IVJ8 170 aa11.99□□□□□ -0.49
SMAD6-201ENST00000288840 CRYBG3Q68DQ2 2970 aa11.98□□□□□ -0.49
SMAD6-201ENST00000288840 FASNP49327 2511 aaKnown RBP11.98□□□□□ -0.49
SMAD6-201ENST00000288840 IGHV4OR15-8A0A075B7B6 117 aa11.98□□□□□ -0.49
SMAD6-201ENST00000288840 A0A087WW49 117 aa11.98□□□□□ -0.49
SMAD6-201ENST00000288840 P0DMU3 169 aa11.98□□□□□ -0.49
SMAD6-201ENST00000288840 FAM231AP0DMU4 169 aa11.98□□□□□ -0.49
SMAD6-201ENST00000288840 FAM231CP0DMU5 169 aa11.98□□□□□ -0.49
SMAD6-201ENST00000288840 CKS1BP61024 79 aa11.98□□□□□ -0.49
SMAD6-201ENST00000288840 SS18L2Q9UHA2 77 aa11.98□□□□□ -0.49
SMAD6-201ENST00000288840 HHLA3Q9XRX5 114 aa11.98□□□□□ -0.49
SMAD6-201ENST00000288840 C11orf86A6NJI1 115 aa11.98□□□□□ -0.49
SMAD6-201ENST00000288840 PMVKQ15126 192 aa11.98□□□□□ -0.49
SMAD6-201ENST00000288840 C20orf78Q9BR46 151 aa11.97□□□□□ -0.49
SMAD6-201ENST00000288840 TRAV26-1A0A087WT03 109 aa11.97□□□□□ -0.49
SMAD6-201ENST00000288840 A6NDX4 124 aa11.97□□□□□ -0.49
SMAD6-201ENST00000288840 IGLL5B9A064 214 aa11.97□□□□□ -0.49
SMAD6-201ENST00000288840 CEMP1Q6PRD7 247 aaPredicted RBP11.97□□□□□ -0.49
SMAD6-201ENST00000288840 ZFP2Q6ZN57 461 aa11.97□□□□□ -0.49
SMAD6-201ENST00000288840 PIFOQ8TCI5 191 aa11.97□□□□□ -0.49
SMAD6-201ENST00000288840 HRNRQ86YZ3 2850 aaPredicted RBP11.97□□□□□ -0.49
SMAD6-201ENST00000288840 LENEPQ9Y5L5 61 aa11.96□□□□□ -0.49
SMAD6-201ENST00000288840 ITPR1Q14643 2758 aa11.96□□□□□ -0.49
SMAD6-201ENST00000288840 SHISA2Q6UWI4 295 aa11.96□□□□□ -0.49
SMAD6-201ENST00000288840 TSSC4Q9Y5U2 329 aaPredicted RBP11.96□□□□□ -0.49
SMAD6-201ENST00000288840 SIGMAR1Q99720 223 aa11.96□□□□□ -0.5
SMAD6-201ENST00000288840 CELSR1Q9NYQ6 3014 aa11.95□□□□□ -0.5
SMAD6-201ENST00000288840 RNASE3P12724 160 aaKnown RBP11.95□□□□□ -0.5
SMAD6-201ENST00000288840 PLEKHB2Q96CS7 222 aa11.95□□□□□ -0.5
SMAD6-201ENST00000288840 LYRM7Q5U5X0 104 aa11.95□□□□□ -0.5
SMAD6-201ENST00000288840 A0A0J9YXV3 536 aa11.94□□□□□ -0.5
SMAD6-201ENST00000288840 CRYBA4P53673 196 aa11.94□□□□□ -0.5
SMAD6-201ENST00000288840 CFHR3Q02985 330 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms