RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 SBSPONQ8IVN8 264 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 RNF182Q8N6D2 247 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 POM121L12Q8N7R1 296 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 NEXN-AS1Q8NBZ9 246 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 PRADC1Q9BSG0 188 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 SMIM2Q9BVW6 85 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 UFC1Q9Y3C8 167 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 ZNF815PA8K554 130 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 TMEM262E9PQX1 116 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 ZNF688P0C7X2 276 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 SRSF9Q13242 221 aaKnown RBP eCLIP7.89□□□□□ -1.15
SKA1-201ENST00000285116 SCGB1D4Q6XE38 83 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 ZFP2Q6ZN57 461 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 APRG1Q8IVJ8 170 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 MAPK1IP1LQ8NDC0 245 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 TOMM6Q96B49 74 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 AGRNO00468 2067 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 GAGE5Q13069 117 aa7.88□□□□□ -1.15
SKA1-201ENST00000285116 GAGE6Q13070 117 aa7.88□□□□□ -1.15
SKA1-201ENST00000285116 ZFAND6Q6FIF0 208 aa7.88□□□□□ -1.15
SKA1-201ENST00000285116 PTH2Q96A98 100 aa7.88□□□□□ -1.15
SKA1-201ENST00000285116 WNK1Q9H4A3 2382 aa7.88□□□□□ -1.15
SKA1-201ENST00000285116 A8MWV9 139 aa7.88□□□□□ -1.15
SKA1-201ENST00000285116 C5orf56Q8N8D9 126 aa7.88□□□□□ -1.15
SKA1-201ENST00000285116 FAM19A4Q96LR4 140 aa7.88□□□□□ -1.15
SKA1-201ENST00000285116 LINC00477Q96M19 166 aa7.88□□□□□ -1.15
SKA1-201ENST00000285116 OTOGQ6ZRI0 2925 aa7.88□□□□□ -1.15
SKA1-201ENST00000285116 PRSS29PA6NIE9 313 aa7.87□□□□□ -1.15
SKA1-201ENST00000285116 CD7P09564 240 aa7.87□□□□□ -1.15
SKA1-201ENST00000285116 RPL32P62910 135 aaKnown RBP7.87□□□□□ -1.15
SKA1-201ENST00000285116 SPANXN1Q5VSR9 72 aa7.87□□□□□ -1.15
SKA1-201ENST00000285116 KMT2BQ9UMN6 2715 aaPredicted RBP7.87□□□□□ -1.15
SKA1-201ENST00000285116 GATA3P23771 443 aa7.87□□□□□ -1.15
SKA1-201ENST00000285116 UCNP55089 124 aa7.87□□□□□ -1.15
SKA1-201ENST00000285116 ECSCRQ19T08 205 aa7.87□□□□□ -1.15
SKA1-201ENST00000285116 CLEC19AQ6UXS0 136 aa7.87□□□□□ -1.15
SKA1-201ENST00000285116 TEX29Q8N6K0 151 aa7.87□□□□□ -1.15
SKA1-201ENST00000285116 FN1P02751 2386 aaKnown RBP7.87□□□□□ -1.15
SKA1-201ENST00000285116 OVOL1O14753 267 aa7.86□□□□□ -1.15
SKA1-201ENST00000285116 NXPH4O95158 308 aa7.86□□□□□ -1.15
SKA1-201ENST00000285116 TCL1BO95988 128 aa7.86□□□□□ -1.15
SKA1-201ENST00000285116 COX6B1P14854 86 aa7.86□□□□□ -1.15
SKA1-201ENST00000285116 SFTA2Q6UW10 78 aa7.86□□□□□ -1.15
SKA1-201ENST00000285116 NDUFA11Q86Y39 141 aa7.86□□□□□ -1.15
SKA1-201ENST00000285116 SOCS3O14543 225 aa7.86□□□□□ -1.15
SKA1-201ENST00000285116 PPP1R17O96001 155 aa7.86□□□□□ -1.15
SKA1-201ENST00000285116 SAA4P35542 130 aa7.86□□□□□ -1.15
SKA1-201ENST00000285116 PLEKHB2Q96CS7 222 aa7.86□□□□□ -1.15
SKA1-201ENST00000285116 H3BUA1 57 aa7.85□□□□□ -1.15
SKA1-201ENST00000285116 BAALCQ8WXS3 180 aa7.85□□□□□ -1.15
SKA1-201ENST00000285116 KLK15Q9H2R5 256 aa7.85□□□□□ -1.15
SKA1-201ENST00000285116 BAHCC1Q9P281 2608 aa7.85□□□□□ -1.15
SKA1-201ENST00000285116 SS18L2Q9UHA2 77 aa7.85□□□□□ -1.15
SKA1-201ENST00000285116 NPFFO15130 113 aa7.85□□□□□ -1.15
SKA1-201ENST00000285116 SUMO2P61956 95 aaKnown RBP7.85□□□□□ -1.15
SKA1-201ENST00000285116 ZFAND2AQ8N6M9 145 aa7.85□□□□□ -1.15
SKA1-201ENST00000285116 TRAV21A0A0B4J279 112 aa7.85□□□□□ -1.15
SKA1-201ENST00000285116 NDUFA4O00483 81 aa7.85□□□□□ -1.15
SKA1-201ENST00000285116 LMO4P61968 165 aa7.85□□□□□ -1.15
SKA1-201ENST00000285116 RASL10AQ92737 203 aa7.85□□□□□ -1.15
SKA1-201ENST00000285116 CITED1Q99966 193 aa7.85□□□□□ -1.15
SKA1-201ENST00000285116 MOB4Q9Y3A3 225 aa7.85□□□□□ -1.15
SKA1-201ENST00000285116 MAST4O15021 2626 aa7.84□□□□□ -1.15
SKA1-201ENST00000285116 C2orf66Q6UXQ4 117 aa7.84□□□□□ -1.15
SKA1-201ENST00000285116 ANKRD29Q8N6D5 301 aa7.84□□□□□ -1.15
SKA1-201ENST00000285116 DPH3P1Q9H4G8 78 aa7.84□□□□□ -1.15
SKA1-201ENST00000285116 IGHV3OR16-8A0A075B7F1 116 aa7.84□□□□□ -1.15
SKA1-201ENST00000285116 LINC01548A6NM66 108 aa7.84□□□□□ -1.15
SKA1-201ENST00000285116 RNF223E7ERA6 249 aa7.84□□□□□ -1.15
SKA1-201ENST00000285116 M0QXV9 152 aa7.84□□□□□ -1.15
SKA1-201ENST00000285116 SRD5A1P18405 259 aa7.84□□□□□ -1.15
SKA1-201ENST00000285116 PRR9Q5T870 116 aa7.84□□□□□ -1.15
SKA1-201ENST00000285116 UBTD1Q9HAC8 227 aa7.84□□□□□ -1.15
SKA1-201ENST00000285116 IGHV3-35A0A0C4DH35 117 aa7.83□□□□□ -1.16
SKA1-201ENST00000285116 A0A0J9YY99 117 aa7.83□□□□□ -1.16
SKA1-201ENST00000285116 G3V318 75 aa7.83□□□□□ -1.16
SKA1-201ENST00000285116 H3BVH4 76 aa7.83□□□□□ -1.16
SKA1-201ENST00000285116 IGF1P05019 195 aa7.83□□□□□ -1.16
SKA1-201ENST00000285116 ASIPP42127 132 aa7.83□□□□□ -1.16
SKA1-201ENST00000285116 HERVK_113P61574 105 aa7.83□□□□□ -1.16
SKA1-201ENST00000285116 GPHB5Q86YW7 130 aa7.83□□□□□ -1.16
SKA1-201ENST00000285116 C10orf126Q8N4M7 172 aa7.83□□□□□ -1.16
SKA1-201ENST00000285116 C16orf92Q96LL3 132 aa7.83□□□□□ -1.16
SKA1-201ENST00000285116 C20orf173Q96LM9 149 aa7.83□□□□□ -1.16
SKA1-201ENST00000285116 TRAV41A0A0B4J266 112 aa7.83□□□□□ -1.16
SKA1-201ENST00000285116 PAPPA-AS1Q5QFB9 102 aa7.83□□□□□ -1.16
SKA1-201ENST00000285116 IGHV1-69DA0A0B4J2H0 117 aa7.82□□□□□ -1.16
SKA1-201ENST00000285116 ZNF843Q8N446 348 aa7.82□□□□□ -1.16
SKA1-201ENST00000285116 KIR2DL4Q99706 377 aa7.82□□□□□ -1.16
SKA1-201ENST00000285116 RHODO00212 210 aa7.82□□□□□ -1.16
SKA1-201ENST00000285116 CFC1BP0CG36 223 aa7.82□□□□□ -1.16
SKA1-201ENST00000285116 CFC1P0CG37 223 aa7.82□□□□□ -1.16
SKA1-201ENST00000285116 SCGB1C2P0DMR2 95 aa7.82□□□□□ -1.16
SKA1-201ENST00000285116 KLHL30-AS1Q8NEE0 82 aa7.82□□□□□ -1.16
SKA1-201ENST00000285116 OR10J6PQ8NGY7 276 aa7.82□□□□□ -1.16
SKA1-201ENST00000285116 USMG5Q96IX5 58 aa7.82□□□□□ -1.16
SKA1-201ENST00000285116 IGHV4OR15-8A0A075B7B6 117 aa7.82□□□□□ -1.16
SKA1-201ENST00000285116 A0A087WW49 117 aa7.82□□□□□ -1.16
SKA1-201ENST00000285116 IGHV3-66A0A0C4DH42 116 aa7.82□□□□□ -1.16
SKA1-201ENST00000285116 B5MCH6 92 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms