RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 PNRC2Q9NPJ4 139 aaKnown RBP10.36□□□□□ -0.75
SMARCA5-201ENST00000283131 FHL1Q13642 323 aa10.35□□□□□ -0.75
SMARCA5-201ENST00000283131 Q8NFD4 153 aa10.35□□□□□ -0.75
SMARCA5-201ENST00000283131 RPL39LQ96EH5 51 aaKnown RBP10.35□□□□□ -0.75
SMARCA5-201ENST00000283131 TRPM3Q9HCF6 1732 aaPredicted RBP10.35□□□□□ -0.75
SMARCA5-201ENST00000283131 SLURP1P55000 103 aa10.35□□□□□ -0.75
SMARCA5-201ENST00000283131 DOPEY1Q5JWR5 2465 aa10.35□□□□□ -0.75
SMARCA5-201ENST00000283131 BRCA1P38398 1863 aaKnown RBP10.35□□□□□ -0.75
SMARCA5-201ENST00000283131 FXYD5Q96DB9 178 aa10.35□□□□□ -0.75
SMARCA5-201ENST00000283131 SMAD5-AS1Q9Y6J3 95 aa10.35□□□□□ -0.75
SMARCA5-201ENST00000283131 K7ENP7 123 aa10.34□□□□□ -0.75
SMARCA5-201ENST00000283131 SONP18583 2426 aaKnown RBP10.34□□□□□ -0.75
SMARCA5-201ENST00000283131 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.34□□□□□ -0.75
SMARCA5-201ENST00000283131 Q8TCH9 128 aa10.34□□□□□ -0.75
SMARCA5-201ENST00000283131 NAV3Q8IVL0 2385 aa10.34□□□□□ -0.75
SMARCA5-201ENST00000283131 DEFB112Q30KQ8 113 aa10.34□□□□□ -0.75
SMARCA5-201ENST00000283131 LINC00311Q8N616 119 aa10.34□□□□□ -0.75
SMARCA5-201ENST00000283131 A0A0J9YWU9 116 aa10.33□□□□□ -0.76
SMARCA5-201ENST00000283131 IGLC1P0CG04 106 aa10.33□□□□□ -0.76
SMARCA5-201ENST00000283131 FAM236DA0A1B0GTK5 79 aa10.33□□□□□ -0.76
SMARCA5-201ENST00000283131 FAM236CP0DP71 79 aa10.33□□□□□ -0.76
SMARCA5-201ENST00000283131 HIST2H2BDQ6DRA6 164 aa10.33□□□□□ -0.76
SMARCA5-201ENST00000283131 ZNF747Q9BV97 191 aa10.33□□□□□ -0.76
SMARCA5-201ENST00000283131 CSPG4Q6UVK1 2322 aa10.33□□□□□ -0.76
SMARCA5-201ENST00000283131 MIR7-3HGQ8N6C7 128 aa10.33□□□□□ -0.76
SMARCA5-201ENST00000283131 Q8N9W7 124 aa10.33□□□□□ -0.76
SMARCA5-201ENST00000283131 OTOGLQ3ZCN5 2332 aa10.33□□□□□ -0.76
SMARCA5-201ENST00000283131 PRYO14603 147 aa10.33□□□□□ -0.76
SMARCA5-201ENST00000283131 SERP2Q8N6R1 65 aa10.33□□□□□ -0.76
SMARCA5-201ENST00000283131 MST1P26927 711 aa10.32□□□□□ -0.76
SMARCA5-201ENST00000283131 FAM120AOSQ5T036 256 aa10.32□□□□□ -0.76
SMARCA5-201ENST00000283131 LYPD6Q86Y78 171 aa10.32□□□□□ -0.76
SMARCA5-201ENST00000283131 PRR4Q16378 134 aa10.32□□□□□ -0.76
SMARCA5-201ENST00000283131 H3BT86 120 aa10.32□□□□□ -0.76
SMARCA5-201ENST00000283131 C9orf85Q96MD7 179 aa10.32□□□□□ -0.76
SMARCA5-201ENST00000283131 SBF2Q86WG5 1849 aa10.32□□□□□ -0.76
SMARCA5-201ENST00000283131 IGHV1-58A0A0C4DH39 117 aa10.32□□□□□ -0.76
SMARCA5-201ENST00000283131 UBE2D3P61077 147 aa10.32□□□□□ -0.76
SMARCA5-201ENST00000283131 Q8N9L7 120 aa10.32□□□□□ -0.76
SMARCA5-201ENST00000283131 CLEC2BQ92478 149 aa10.32□□□□□ -0.76
SMARCA5-201ENST00000283131 IGHV4-30-2A0A087WSY4 118 aa10.32□□□□□ -0.76
SMARCA5-201ENST00000283131 A0A0J9YXV3 536 aa10.32□□□□□ -0.76
SMARCA5-201ENST00000283131 DEFB135Q30KP9 77 aa10.32□□□□□ -0.76
SMARCA5-201ENST00000283131 Q8N1Y9 231 aa10.31□□□□□ -0.76
SMARCA5-201ENST00000283131 LCTP09848 1927 aa10.31□□□□□ -0.76
SMARCA5-201ENST00000283131 ZNF491Q8N8L2 437 aa10.31□□□□□ -0.76
SMARCA5-201ENST00000283131 FAM19A1Q7Z5A9 133 aa10.31□□□□□ -0.76
SMARCA5-201ENST00000283131 IGKV1D-37A0A075B6S9 117 aa10.31□□□□□ -0.76
SMARCA5-201ENST00000283131 WT1-ASQ06250 92 aa10.31□□□□□ -0.76
SMARCA5-201ENST00000283131 C20orf197Q8N268 126 aa10.31□□□□□ -0.76
SMARCA5-201ENST00000283131 C17orf58Q2M2W7 97 aa10.31□□□□□ -0.76
SMARCA5-201ENST00000283131 LINC00643Q86TS7 51 aa10.31□□□□□ -0.76
SMARCA5-201ENST00000283131 TPSG1Q9NRR2 321 aa10.31□□□□□ -0.76
SMARCA5-201ENST00000283131 PRR30Q53SZ7 412 aaPredicted RBP10.3□□□□□ -0.76
SMARCA5-201ENST00000283131 AGPAT4-IT1Q9H0P7 198 aa10.3□□□□□ -0.76
SMARCA5-201ENST00000283131 GATA1P15976 413 aaPredicted RBP10.3□□□□□ -0.76
SMARCA5-201ENST00000283131 ATP5EP56381 51 aaPredicted RBP10.29□□□□□ -0.76
SMARCA5-201ENST00000283131 G3V4G9 280 aa10.29□□□□□ -0.76
SMARCA5-201ENST00000283131 KIAA1549Q9HCM3 1950 aa10.29□□□□□ -0.76
SMARCA5-201ENST00000283131 UBR3Q6ZT12 1888 aa10.29□□□□□ -0.76
SMARCA5-201ENST00000283131 C16orf54Q6UWD8 224 aa10.29□□□□□ -0.76
SMARCA5-201ENST00000283131 UFSP1Q6NVU6 142 aa10.29□□□□□ -0.76
SMARCA5-201ENST00000283131 ASPHD1Q5U4P2 390 aa10.29□□□□□ -0.76
SMARCA5-201ENST00000283131 OBSL1O75147 1896 aa10.28□□□□□ -0.76
SMARCA5-201ENST00000283131 C11orf45Q8TAV5 145 aa10.28□□□□□ -0.76
SMARCA5-201ENST00000283131 QRFPP83859 136 aa10.28□□□□□ -0.76
SMARCA5-201ENST00000283131 DEFB113Q30KQ7 82 aa10.28□□□□□ -0.76
SMARCA5-201ENST00000283131 SPINK6Q6UWN8 80 aa10.28□□□□□ -0.76
SMARCA5-201ENST00000283131 ZNF581Q9P0T4 197 aa10.28□□□□□ -0.76
SMARCA5-201ENST00000283131 DEFB4AO15263 64 aa10.27□□□□□ -0.76
SMARCA5-201ENST00000283131 NDUFC1O43677 76 aa10.27□□□□□ -0.77
SMARCA5-201ENST00000283131 WFDC2Q14508 124 aa10.27□□□□□ -0.77
SMARCA5-201ENST00000283131 IGHV2-5P01817 119 aa10.27□□□□□ -0.77
SMARCA5-201ENST00000283131 MED14OSP0DP75 135 aa10.27□□□□□ -0.77
SMARCA5-201ENST00000283131 ADCYAP1P18509 176 aa10.27□□□□□ -0.77
SMARCA5-201ENST00000283131 IGKV1-17P01599 117 aa10.26□□□□□ -0.77
SMARCA5-201ENST00000283131 PRSS33Q8NF86 280 aa10.26□□□□□ -0.77
SMARCA5-201ENST00000283131 SPRY2O43597 315 aa10.26□□□□□ -0.77
SMARCA5-201ENST00000283131 IGHV2-70P01814 119 aa10.26□□□□□ -0.77
SMARCA5-201ENST00000283131 TECTAO75443 2155 aa10.26□□□□□ -0.77
SMARCA5-201ENST00000283131 Q6ZVQ6 151 aa10.26□□□□□ -0.77
SMARCA5-201ENST00000283131 TICRRQ7Z2Z1 1910 aa10.26□□□□□ -0.77
SMARCA5-201ENST00000283131 PRO0255Q9UI72 69 aa10.25□□□□□ -0.77
SMARCA5-201ENST00000283131 FLVCR1-AS1Q8TAF5 88 aa10.25□□□□□ -0.77
SMARCA5-201ENST00000283131 FAM208BQ5VWN6 2430 aa10.25□□□□□ -0.77
SMARCA5-201ENST00000283131 UQCRQO14949 82 aa10.25□□□□□ -0.77
SMARCA5-201ENST00000283131 IGHV4-30-4P0DP06 118 aa10.25□□□□□ -0.77
SMARCA5-201ENST00000283131 IGHV4-31P0DP07 118 aa10.25□□□□□ -0.77
SMARCA5-201ENST00000283131 C10orf105Q8TEF2 133 aa10.25□□□□□ -0.77
SMARCA5-201ENST00000283131 RETNQ9HD89 108 aa10.25□□□□□ -0.77
SMARCA5-201ENST00000283131 RPL39P62891 51 aaKnown RBP10.25□□□□□ -0.77
SMARCA5-201ENST00000283131 TRAV26-1A0A087WT03 109 aa10.24□□□□□ -0.77
SMARCA5-201ENST00000283131 CRYGDP07320 174 aa10.24□□□□□ -0.77
SMARCA5-201ENST00000283131 B3GALT5-AS1P59052 145 aa10.24□□□□□ -0.77
SMARCA5-201ENST00000283131 ZNF706Q9Y5V0 76 aaPredicted RBP10.24□□□□□ -0.77
SMARCA5-201ENST00000283131 CENPVL3A0A0U1RRI6 287 aa10.24□□□□□ -0.77
SMARCA5-201ENST00000283131 AGRNO00468 2067 aa10.24□□□□□ -0.77
SMARCA5-201ENST00000283131 TMEM263Q8WUH6 116 aaKnown RBP10.23□□□□□ -0.77
SMARCA5-201ENST00000283131 VWCEQ96DN2 955 aa10.23□□□□□ -0.77
SMARCA5-201ENST00000283131 ATP5EP2Q5VTU8 51 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms