RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 NBL1P41271 181 aa8.94□□□□□ -0.98
VPS33A-201ENST00000267199 MAPK1IP1LQ8NDC0 245 aa8.94□□□□□ -0.98
VPS33A-201ENST00000267199 NDUFA4O00483 81 aa8.93□□□□□ -0.98
VPS33A-201ENST00000267199 C2orf91Q6ZV80 131 aa8.93□□□□□ -0.98
VPS33A-201ENST00000267199 TMEM86BQ8N661 226 aa8.93□□□□□ -0.98
VPS33A-201ENST00000267199 A0A0J9YXV3 536 aa8.93□□□□□ -0.98
VPS33A-201ENST00000267199 HTN3P15516 51 aa8.93□□□□□ -0.98
VPS33A-201ENST00000267199 ZNF415Q09FC8 603 aa8.93□□□□□ -0.98
VPS33A-201ENST00000267199 Q8NA96 180 aa8.93□□□□□ -0.98
VPS33A-201ENST00000267199 MUSTN1Q8IVN3 82 aa8.93□□□□□ -0.98
VPS33A-201ENST00000267199 SPTBN4Q9H254 2564 aa8.93□□□□□ -0.98
VPS33A-201ENST00000267199 CENPVL3A0A0U1RRI6 287 aa8.92□□□□□ -0.98
VPS33A-201ENST00000267199 MT-ATP8P03928 68 aa8.92□□□□□ -0.98
VPS33A-201ENST00000267199 CHD8Q9HCK8 2581 aa8.92□□□□□ -0.98
VPS33A-201ENST00000267199 IGHV1OR15-1A0A075B7D0 117 aa8.92□□□□□ -0.98
VPS33A-201ENST00000267199 RBAKDNA6NC62 111 aa8.92□□□□□ -0.98
VPS33A-201ENST00000267199 BUB3O43684 328 aa8.92□□□□□ -0.98
VPS33A-201ENST00000267199 C11orf86A6NJI1 115 aa8.92□□□□□ -0.98
VPS33A-201ENST00000267199 PRSS47A8MTI9 375 aa8.92□□□□□ -0.98
VPS33A-201ENST00000267199 PFN2P35080 140 aa8.92□□□□□ -0.98
VPS33A-201ENST00000267199 Q8N9W7 124 aa8.92□□□□□ -0.98
VPS33A-201ENST00000267199 RNF183Q96D59 192 aa8.92□□□□□ -0.98
VPS33A-201ENST00000267199 HIVEP3Q5T1R4 2406 aa8.92□□□□□ -0.98
VPS33A-201ENST00000267199 FANCD2OSQ96PS1 177 aa8.92□□□□□ -0.98
VPS33A-201ENST00000267199 COL5A1P20908 1838 aaPredicted RBP8.91□□□□□ -0.98
VPS33A-201ENST00000267199 LAMA2P24043 3122 aaKnown RBP8.91□□□□□ -0.98
VPS33A-201ENST00000267199 DSCR9P59020 149 aa8.91□□□□□ -0.98
VPS33A-201ENST00000267199 C6orf226Q5I0X4 101 aa8.91□□□□□ -0.98
VPS33A-201ENST00000267199 SPANXB1Q9NS25 103 aaPredicted RBP8.91□□□□□ -0.98
VPS33A-201ENST00000267199 WI2-2373I1.2A0A1W2PRP0 233 aa8.91□□□□□ -0.98
VPS33A-201ENST00000267199 MALP21145 153 aa8.91□□□□□ -0.98
VPS33A-201ENST00000267199 ZFP2Q6ZN57 461 aa8.91□□□□□ -0.98
VPS33A-201ENST00000267199 BAALCQ8WXS3 180 aa8.91□□□□□ -0.98
VPS33A-201ENST00000267199 XCL2Q9UBD3 114 aa8.9□□□□□ -0.98
VPS33A-201ENST00000267199 LINC01620Q4KN68 170 aa8.9□□□□□ -0.98
VPS33A-201ENST00000267199 S100A7L2Q5SY68 101 aa8.9□□□□□ -0.98
VPS33A-201ENST00000267199 MAPKAPK5-AS1Q8N8E1 139 aa8.9□□□□□ -0.98
VPS33A-201ENST00000267199 LAMTOR3Q9UHA4 124 aa8.9□□□□□ -0.98
VPS33A-201ENST00000267199 BRCA2P51587 3418 aa8.9□□□□□ -0.98
VPS33A-201ENST00000267199 E9PLD3 99 aa8.9□□□□□ -0.98
VPS33A-201ENST00000267199 DAND5Q8N907 189 aa8.9□□□□□ -0.98
VPS33A-201ENST00000267199 PF4P02776 101 aa8.9□□□□□ -0.99
VPS33A-201ENST00000267199 CRIP1P50238 77 aa8.9□□□□□ -0.99
VPS33A-201ENST00000267199 INAFM2P0DMQ5 153 aa8.89□□□□□ -0.99
VPS33A-201ENST00000267199 JPT2Q9H910 190 aa8.89□□□□□ -0.99
VPS33A-201ENST00000267199 ZFP36P26651 326 aaKnown RBP8.89□□□□□ -0.99
VPS33A-201ENST00000267199 SUMO4Q6EEV6 95 aa8.89□□□□□ -0.99
VPS33A-201ENST00000267199 Q6ZUT4 128 aa8.89□□□□□ -0.99
VPS33A-201ENST00000267199 ZNRF2Q8NHG8 242 aa8.89□□□□□ -0.99
VPS33A-201ENST00000267199 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.88□□□□□ -0.99
VPS33A-201ENST00000267199 IGKV2-29A2NJV5 120 aaPredicted RBP8.88□□□□□ -0.99
VPS33A-201ENST00000267199 URB1-AS1Q96HZ7 61 aa8.88□□□□□ -0.99
VPS33A-201ENST00000267199 IGHV7-4-1A0A0J9YVY3 117 aa8.88□□□□□ -0.99
VPS33A-201ENST00000267199 TINCRA0A1B0GVN0 87 aa8.88□□□□□ -0.99
VPS33A-201ENST00000267199 ADORA2A-AS1P86434 159 aa8.88□□□□□ -0.99
VPS33A-201ENST00000267199 CFHR3Q02985 330 aa8.88□□□□□ -0.99
VPS33A-201ENST00000267199 TCL1BO95988 128 aa8.88□□□□□ -0.99
VPS33A-201ENST00000267199 OPRPNQ99935 248 aaPredicted RBP8.88□□□□□ -0.99
VPS33A-201ENST00000267199 LINC01356Q8N9X3 169 aa8.87□□□□□ -0.99
VPS33A-201ENST00000267199 RNF223E7ERA6 249 aa8.87□□□□□ -0.99
VPS33A-201ENST00000267199 LAMA3Q16787 3333 aa8.87□□□□□ -0.99
VPS33A-201ENST00000267199 INSL3P51460 131 aa8.87□□□□□ -0.99
VPS33A-201ENST00000267199 BLCAPP62952 87 aa8.87□□□□□ -0.99
VPS33A-201ENST00000267199 TRAV12-1A0A0B4J245 112 aa8.87□□□□□ -0.99
VPS33A-201ENST00000267199 MRPL53Q96EL3 112 aaKnown RBP8.87□□□□□ -0.99
VPS33A-201ENST00000267199 IGHV4-61A0A0C4DH41 118 aa8.86□□□□□ -0.99
VPS33A-201ENST00000267199 FAM236AA0A1B0GUQ0 79 aa8.86□□□□□ -0.99
VPS33A-201ENST00000267199 FAM236BA0A1B0GV22 79 aa8.86□□□□□ -0.99
VPS33A-201ENST00000267199 RPL35AP18077 110 aaKnown RBP8.86□□□□□ -0.99
VPS33A-201ENST00000267199 HOXD3P31249 432 aaPredicted RBP8.86□□□□□ -0.99
VPS33A-201ENST00000267199 TM2D2Q9BX73 214 aa8.86□□□□□ -0.99
VPS33A-201ENST00000267199 Q9H8V8 135 aa8.86□□□□□ -0.99
VPS33A-201ENST00000267199 SPANXA1Q9NS26 97 aa8.86□□□□□ -0.99
VPS33A-201ENST00000267199 LENEPQ9Y5L5 61 aa8.86□□□□□ -0.99
VPS33A-201ENST00000267199 CHD9Q3L8U1 2897 aa8.86□□□□□ -0.99
VPS33A-201ENST00000267199 NXPH4O95158 308 aa8.86□□□□□ -0.99
VPS33A-201ENST00000267199 MYCNOSP40205 109 aa8.86□□□□□ -0.99
VPS33A-201ENST00000267199 NDUFA11Q86Y39 141 aa8.86□□□□□ -0.99
VPS33A-201ENST00000267199 CLEC2BQ92478 149 aa8.86□□□□□ -0.99
VPS33A-201ENST00000267199 TOMM6Q96B49 74 aa8.86□□□□□ -0.99
VPS33A-201ENST00000267199 CLUHP3Q96NS8 147 aa8.86□□□□□ -0.99
VPS33A-201ENST00000267199 TRBV6-1A0A0K0K1D8 114 aa8.85□□□□□ -0.99
VPS33A-201ENST00000267199 SOCS3O14543 225 aa8.85□□□□□ -0.99
VPS33A-201ENST00000267199 INSP01308 110 aa8.85□□□□□ -0.99
VPS33A-201ENST00000267199 TCTEX1D4Q5JR98 221 aa8.85□□□□□ -0.99
VPS33A-201ENST00000267199 GAS8-AS1O95177 125 aa8.85□□□□□ -0.99
VPS33A-201ENST00000267199 BAALC-AS2P0C853 105 aa8.85□□□□□ -0.99
VPS33A-201ENST00000267199 IGLC6P0CF74 106 aa8.85□□□□□ -0.99
VPS33A-201ENST00000267199 IGHV4-38-2P0DP08 117 aa8.85□□□□□ -0.99
VPS33A-201ENST00000267199 GATA3P23771 443 aa8.84□□□□□ -0.99
VPS33A-201ENST00000267199 ICOSQ9Y6W8 199 aa8.84□□□□□ -0.99
VPS33A-201ENST00000267199 IGHG4P01861 327 aa8.84□□□□□ -0.99
VPS33A-201ENST00000267199 RHODO00212 210 aa8.83□□□□□ -1
VPS33A-201ENST00000267199 IGLV2-11P01706 119 aa8.83□□□□□ -1
VPS33A-201ENST00000267199 CRYGBP07316 175 aa8.83□□□□□ -1
VPS33A-201ENST00000267199 DEFB130BP0DP73 79 aa8.83□□□□□ -1
VPS33A-201ENST00000267199 DEFB130AP0DP74 79 aa8.83□□□□□ -1
VPS33A-201ENST00000267199 FBXL19-AS1Q494R0 122 aa8.83□□□□□ -1
VPS33A-201ENST00000267199 SP5Q6BEB4 398 aaPredicted RBP8.83□□□□□ -1
VPS33A-201ENST00000267199 C5orf56Q8N8D9 126 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms