RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 POM121L12Q8N7R1 296 aa8.43□□□□□ -1.06
SCAF11-201ENST00000266589 GSN-AS1Q9NRJ2 163 aa8.43□□□□□ -1.06
SCAF11-201ENST00000266589 ATRQ13535 2644 aa8.43□□□□□ -1.06
SCAF11-201ENST00000266589 IGHV3OR16-12A0A075B7B8 117 aa8.42□□□□□ -1.06
SCAF11-201ENST00000266589 LINC00315P59091 139 aa8.42□□□□□ -1.06
SCAF11-201ENST00000266589 FAM74A4Q5TZK3 123 aa8.42□□□□□ -1.06
SCAF11-201ENST00000266589 NXT2Q9NPJ8 142 aaKnown RBP8.42□□□□□ -1.06
SCAF11-201ENST00000266589 VWFP04275 2813 aa8.42□□□□□ -1.06
SCAF11-201ENST00000266589 LINC00173Q6ZV60 143 aa8.42□□□□□ -1.06
SCAF11-201ENST00000266589 GTSCR1Q86UQ5 136 aa8.42□□□□□ -1.06
SCAF11-201ENST00000266589 DEFB125Q8N687 156 aa8.42□□□□□ -1.06
SCAF11-201ENST00000266589 C11orf72Q8NBR9 251 aa8.42□□□□□ -1.06
SCAF11-201ENST00000266589 RASL10AQ92737 203 aa8.42□□□□□ -1.06
SCAF11-201ENST00000266589 RPL39LQ96EH5 51 aaKnown RBP8.42□□□□□ -1.06
SCAF11-201ENST00000266589 A0A096LNJ9 63 aa8.41□□□□□ -1.06
SCAF11-201ENST00000266589 PRSS47A8MTI9 375 aa8.41□□□□□ -1.06
SCAF11-201ENST00000266589 GIG44P09565 113 aaPredicted RBP8.41□□□□□ -1.06
SCAF11-201ENST00000266589 S100A12P80511 92 aa8.41□□□□□ -1.06
SCAF11-201ENST00000266589 Q8N8P6 123 aa8.41□□□□□ -1.06
SCAF11-201ENST00000266589 IGLV2-18A0A075B6J9 118 aa8.41□□□□□ -1.06
SCAF11-201ENST00000266589 LINC01546A6NGU7 62 aa8.41□□□□□ -1.06
SCAF11-201ENST00000266589 F5H697 171 aa8.41□□□□□ -1.06
SCAF11-201ENST00000266589 CRYGDP07320 174 aa8.41□□□□□ -1.06
SCAF11-201ENST00000266589 SUMO4Q6EEV6 95 aa8.41□□□□□ -1.06
SCAF11-201ENST00000266589 Q8N976 141 aa8.41□□□□□ -1.06
SCAF11-201ENST00000266589 M0R2P5 195 aa8.4□□□□□ -1.06
SCAF11-201ENST00000266589 AZU1P20160 251 aa8.4□□□□□ -1.06
SCAF11-201ENST00000266589 ZNF56Q15929 161 aa8.4□□□□□ -1.06
SCAF11-201ENST00000266589 MORN3Q6PF18 240 aaPredicted RBP8.4□□□□□ -1.06
SCAF11-201ENST00000266589 TMEM70Q9BUB7 260 aa8.4□□□□□ -1.06
SCAF11-201ENST00000266589 MCRIP2Q9BUT9 160 aaKnown RBP8.4□□□□□ -1.06
SCAF11-201ENST00000266589 HSPB8Q9UJY1 196 aa8.4□□□□□ -1.06
SCAF11-201ENST00000266589 PPP1R17O96001 155 aa8.39□□□□□ -1.07
SCAF11-201ENST00000266589 HBDP02042 147 aa8.39□□□□□ -1.07
SCAF11-201ENST00000266589 SUMO2P61956 95 aaKnown RBP8.39□□□□□ -1.07
SCAF11-201ENST00000266589 C20orf78Q9BR46 151 aa8.39□□□□□ -1.07
SCAF11-201ENST00000266589 SMIM2Q9BVW6 85 aa8.39□□□□□ -1.07
SCAF11-201ENST00000266589 C1QTNF4Q9BXJ3 329 aa8.39□□□□□ -1.07
SCAF11-201ENST00000266589 IGLL1P15814 213 aa8.39□□□□□ -1.07
SCAF11-201ENST00000266589 PRIMA1Q86XR5 153 aa8.39□□□□□ -1.07
SCAF11-201ENST00000266589 GOLT1BQ9Y3E0 138 aa8.39□□□□□ -1.07
SCAF11-201ENST00000266589 TEX43Q6ZNM6 134 aa8.38□□□□□ -1.07
SCAF11-201ENST00000266589 WFDC9Q8NEX5 89 aa8.38□□□□□ -1.07
SCAF11-201ENST00000266589 PTH2Q96A98 100 aa8.38□□□□□ -1.07
SCAF11-201ENST00000266589 SPXQ9BT56 116 aa8.38□□□□□ -1.07
SCAF11-201ENST00000266589 ZNF747Q9BV97 191 aa8.38□□□□□ -1.07
SCAF11-201ENST00000266589 MAP1LC3CQ9BXW4 147 aa8.38□□□□□ -1.07
SCAF11-201ENST00000266589 SYS1-DBNDD2H3BUS1 97 aa8.38□□□□□ -1.07
SCAF11-201ENST00000266589 TCAPO15273 167 aa8.38□□□□□ -1.07
SCAF11-201ENST00000266589 PIK3CD-AS1Q5SR53 167 aa8.38□□□□□ -1.07
SCAF11-201ENST00000266589 SPATA12Q7Z6I5 190 aa8.38□□□□□ -1.07
SCAF11-201ENST00000266589 RNASE8Q8TDE3 154 aaKnown RBP8.38□□□□□ -1.07
SCAF11-201ENST00000266589 MRPL16Q9NX20 251 aaKnown RBP8.38□□□□□ -1.07
SCAF11-201ENST00000266589 A8MWV9 139 aa8.37□□□□□ -1.07
SCAF11-201ENST00000266589 FCER1GP30273 86 aa8.37□□□□□ -1.07
SCAF11-201ENST00000266589 LAGE3Q14657 143 aa8.37□□□□□ -1.07
SCAF11-201ENST00000266589 C3orf56Q8N813 242 aa8.37□□□□□ -1.07
SCAF11-201ENST00000266589 CSNK1G2-AS1Q8NCQ2 148 aa8.37□□□□□ -1.07
SCAF11-201ENST00000266589 TMEM263Q8WUH6 116 aaKnown RBP8.37□□□□□ -1.07
SCAF11-201ENST00000266589 IGHV3-73A0A0B4J1V6 119 aa8.36□□□□□ -1.07
SCAF11-201ENST00000266589 H0Y8G0 127 aa8.36□□□□□ -1.07
SCAF11-201ENST00000266589 ZNF664Q8N3J9 261 aa8.36□□□□□ -1.07
SCAF11-201ENST00000266589 IL17DQ8TAD2 202 aa8.36□□□□□ -1.07
SCAF11-201ENST00000266589 TMEM158Q8WZ71 300 aa8.36□□□□□ -1.07
SCAF11-201ENST00000266589 CSTL1Q9H114 145 aa8.36□□□□□ -1.07
SCAF11-201ENST00000266589 PRO1933Q9H354 126 aa8.36□□□□□ -1.07
SCAF11-201ENST00000266589 ST20Q9HBF5 79 aa8.36□□□□□ -1.07
SCAF11-201ENST00000266589 M0QY20 66 aa8.36□□□□□ -1.07
SCAF11-201ENST00000266589 PKIAP61925 76 aa8.35□□□□□ -1.07
SCAF11-201ENST00000266589 CFAP126Q5VTH2 177 aa8.35□□□□□ -1.07
SCAF11-201ENST00000266589 ZNF705AQ6ZN79 300 aaPredicted RBP8.35□□□□□ -1.07
SCAF11-201ENST00000266589 ATOH7Q8N100 152 aa8.35□□□□□ -1.07
SCAF11-201ENST00000266589 NACAE9PAV3 2078 aa8.35□□□□□ -1.07
SCAF11-201ENST00000266589 FBN1P35555 2871 aaKnown RBP8.35□□□□□ -1.07
SCAF11-201ENST00000266589 C20orf202A1L168 122 aa8.34□□□□□ -1.07
SCAF11-201ENST00000266589 TSTD3H0UI37 97 aa8.34□□□□□ -1.07
SCAF11-201ENST00000266589 WIPF1O43516 503 aa8.34□□□□□ -1.07
SCAF11-201ENST00000266589 UFSP1Q6NVU6 142 aa8.34□□□□□ -1.07
SCAF11-201ENST00000266589 PET117Q6UWS5 81 aa8.34□□□□□ -1.07
SCAF11-201ENST00000266589 C12orf54Q6X4T0 127 aa8.34□□□□□ -1.07
SCAF11-201ENST00000266589 NEGR1Q7Z3B1 354 aa8.34□□□□□ -1.07
SCAF11-201ENST00000266589 C16orf74Q96GX8 76 aa8.34□□□□□ -1.07
SCAF11-201ENST00000266589 C18orf15Q96N68 181 aa8.34□□□□□ -1.07
SCAF11-201ENST00000266589 VAMP8Q9BV40 100 aa8.34□□□□□ -1.07
SCAF11-201ENST00000266589 TRGV1A0A0A0MS02 117 aa8.34□□□□□ -1.07
SCAF11-201ENST00000266589 TRBV6-5A0A0K0K1A5 114 aa8.34□□□□□ -1.07
SCAF11-201ENST00000266589 NUDT3O95989 172 aa8.34□□□□□ -1.07
SCAF11-201ENST00000266589 RPL32P62910 135 aaKnown RBP8.34□□□□□ -1.07
SCAF11-201ENST00000266589 ORMDL2Q53FV1 153 aa8.34□□□□□ -1.07
SCAF11-201ENST00000266589 SHISA2Q6UWI4 295 aa8.34□□□□□ -1.07
SCAF11-201ENST00000266589 IFI27L1Q96BM0 104 aa8.34□□□□□ -1.07
SCAF11-201ENST00000266589 NDUFAF3Q9BU61 184 aa8.34□□□□□ -1.07
SCAF11-201ENST00000266589 PAM16Q9Y3D7 125 aa8.34□□□□□ -1.07
SCAF11-201ENST00000266589 SDHAF1A6NFY7 115 aa8.33□□□□□ -1.08
SCAF11-201ENST00000266589 K7EMI3 77 aa8.33□□□□□ -1.08
SCAF11-201ENST00000266589 POLR2KP53803 58 aaKnown RBP8.33□□□□□ -1.08
SCAF11-201ENST00000266589 RRN3P1Q2M238 152 aa8.33□□□□□ -1.08
SCAF11-201ENST00000266589 NOTCH3Q9UM47 2321 aa8.33□□□□□ -1.08
SCAF11-201ENST00000266589 H7C1H1 209 aa8.33□□□□□ -1.08
SCAF11-201ENST00000266589 RHODO00212 210 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms