RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 FAM110AQ9BQ89 295 aa11.54□□□□□ -0.56
VPS26A-201ENST00000263559 C20orf144Q9BQM9 153 aa11.54□□□□□ -0.56
VPS26A-201ENST00000263559 LINC00587B1AMM8 73 aa11.54□□□□□ -0.56
VPS26A-201ENST00000263559 SYS1-DBNDD2H3BUS1 97 aa11.54□□□□□ -0.56
VPS26A-201ENST00000263559 ZNF876PQ49A33 203 aa11.54□□□□□ -0.56
VPS26A-201ENST00000263559 ZNF747Q9BV97 191 aa11.54□□□□□ -0.56
VPS26A-201ENST00000263559 JMJD1CQ15652 2540 aa11.54□□□□□ -0.56
VPS26A-201ENST00000263559 TSTD3H0UI37 97 aa11.53□□□□□ -0.56
VPS26A-201ENST00000263559 HBDP02042 147 aa11.53□□□□□ -0.56
VPS26A-201ENST00000263559 MAP1LC3CQ9BXW4 147 aa11.53□□□□□ -0.56
VPS26A-201ENST00000263559 FAM74A4Q5TZK3 123 aa11.53□□□□□ -0.56
VPS26A-201ENST00000263559 LINC00467Q9BRT7 94 aa11.53□□□□□ -0.56
VPS26A-201ENST00000263559 CRYGDP07320 174 aa11.52□□□□□ -0.57
VPS26A-201ENST00000263559 NUTF2P61970 127 aaKnown RBP11.52□□□□□ -0.57
VPS26A-201ENST00000263559 ATOH7Q8N100 152 aa11.52□□□□□ -0.57
VPS26A-201ENST00000263559 C1orf158Q8N1D5 194 aa11.52□□□□□ -0.57
VPS26A-201ENST00000263559 SUMO2P61956 95 aaKnown RBP11.52□□□□□ -0.57
VPS26A-201ENST00000263559 VAMP8Q9BV40 100 aa11.52□□□□□ -0.57
VPS26A-201ENST00000263559 PAM16Q9Y3D7 125 aa11.52□□□□□ -0.57
VPS26A-201ENST00000263559 F5H697 171 aa11.51□□□□□ -0.57
VPS26A-201ENST00000263559 SUMO4Q6EEV6 95 aa11.51□□□□□ -0.57
VPS26A-201ENST00000263559 SMIM2Q9BVW6 85 aa11.51□□□□□ -0.57
VPS26A-201ENST00000263559 CYSRT1A8MQ03 144 aa11.51□□□□□ -0.57
VPS26A-201ENST00000263559 H0Y8G0 127 aa11.51□□□□□ -0.57
VPS26A-201ENST00000263559 TCAPO15273 167 aa11.51□□□□□ -0.57
VPS26A-201ENST00000263559 TEP1Q99973 2627 aaKnown RBP11.51□□□□□ -0.57
VPS26A-201ENST00000263559 C20orf78Q9BR46 151 aa11.51□□□□□ -0.57
VPS26A-201ENST00000263559 TMEM208Q9BTX3 173 aa11.51□□□□□ -0.57
VPS26A-201ENST00000263559 MCRIP2Q9BUT9 160 aaKnown RBP11.51□□□□□ -0.57
VPS26A-201ENST00000263559 BAHCC1Q9P281 2608 aa11.51□□□□□ -0.57
VPS26A-201ENST00000263559 VWFP04275 2813 aa11.5□□□□□ -0.57
VPS26A-201ENST00000263559 ATRQ13535 2644 aa11.5□□□□□ -0.57
VPS26A-201ENST00000263559 IGHV3OR16-12A0A075B7B8 117 aa11.5□□□□□ -0.57
VPS26A-201ENST00000263559 FCER1GP30273 86 aa11.5□□□□□ -0.57
VPS26A-201ENST00000263559 ZNF415Q09FC8 603 aa11.5□□□□□ -0.57
VPS26A-201ENST00000263559 C11orf72Q8NBR9 251 aa11.5□□□□□ -0.57
VPS26A-201ENST00000263559 PET117Q6UWS5 81 aa11.5□□□□□ -0.57
VPS26A-201ENST00000263559 KIR2DL5BA0A0G2JN68 375 aa11.49□□□□□ -0.57
VPS26A-201ENST00000263559 KIR2DL5BA0A0G2JPC4 375 aa11.49□□□□□ -0.57
VPS26A-201ENST00000263559 GIG44P09565 113 aaPredicted RBP11.49□□□□□ -0.57
VPS26A-201ENST00000263559 RPL35AP18077 110 aaKnown RBP11.49□□□□□ -0.57
VPS26A-201ENST00000263559 AZU1P20160 251 aa11.49□□□□□ -0.57
VPS26A-201ENST00000263559 KIR2DL5AQ8N109 375 aa11.49□□□□□ -0.57
VPS26A-201ENST00000263559 TMEM158Q8WZ71 300 aa11.49□□□□□ -0.57
VPS26A-201ENST00000263559 PPP1R17O96001 155 aa11.49□□□□□ -0.57
VPS26A-201ENST00000263559 LAGE3Q14657 143 aa11.49□□□□□ -0.57
VPS26A-201ENST00000263559 M0R2P5 195 aa11.48□□□□□ -0.57
VPS26A-201ENST00000263559 ZNF56Q15929 161 aa11.48□□□□□ -0.57
VPS26A-201ENST00000263559 DDTP30046 118 aa11.48□□□□□ -0.57
VPS26A-201ENST00000263559 INSL3P51460 131 aa11.48□□□□□ -0.57
VPS26A-201ENST00000263559 MAJINQ3KP22 176 aa11.48□□□□□ -0.57
VPS26A-201ENST00000263559 C9orf66Q5T8R8 295 aa11.47□□□□□ -0.57
VPS26A-201ENST00000263559 C18orf15Q96N68 181 aa11.47□□□□□ -0.57
VPS26A-201ENST00000263559 NOTCH3Q9UM47 2321 aa11.46□□□□□ -0.57
VPS26A-201ENST00000263559 C20orf202A1L168 122 aa11.46□□□□□ -0.57
VPS26A-201ENST00000263559 IFI27L1Q96BM0 104 aa11.46□□□□□ -0.57
VPS26A-201ENST00000263559 CSTL1Q9H114 145 aa11.46□□□□□ -0.57
VPS26A-201ENST00000263559 NACAE9PAV3 2078 aa11.46□□□□□ -0.57
VPS26A-201ENST00000263559 M0QY20 66 aa11.46□□□□□ -0.58
VPS26A-201ENST00000263559 SPATA45Q537H7 98 aa11.46□□□□□ -0.58
VPS26A-201ENST00000263559 LINC01545Q5VT33 79 aa11.46□□□□□ -0.58
VPS26A-201ENST00000263559 PMCHL2Q9BQD1 86 aa11.46□□□□□ -0.58
VPS26A-201ENST00000263559 SPXQ9BT56 116 aa11.46□□□□□ -0.58
VPS26A-201ENST00000263559 ST20Q9HBF5 79 aa11.46□□□□□ -0.58
VPS26A-201ENST00000263559 PTH2Q96A98 100 aa11.45□□□□□ -0.58
VPS26A-201ENST00000263559 PIK3CD-AS1Q5SR53 167 aa11.45□□□□□ -0.58
VPS26A-201ENST00000263559 MORN3Q6PF18 240 aaPredicted RBP11.45□□□□□ -0.58
VPS26A-201ENST00000263559 ZNF705AQ6ZN79 300 aaPredicted RBP11.45□□□□□ -0.58
VPS26A-201ENST00000263559 NEGR1Q7Z3B1 354 aa11.45□□□□□ -0.58
VPS26A-201ENST00000263559 IGHV3-73A0A0B4J1V6 119 aa11.44□□□□□ -0.58
VPS26A-201ENST00000263559 POLR2KP53803 58 aaKnown RBP11.44□□□□□ -0.58
VPS26A-201ENST00000263559 MRPL16Q9NX20 251 aaKnown RBP11.44□□□□□ -0.58
VPS26A-201ENST00000263559 TRAV9-2A0A087WT02 112 aa11.44□□□□□ -0.58
VPS26A-201ENST00000263559 A8MWV9 139 aa11.44□□□□□ -0.58
VPS26A-201ENST00000263559 NUDT3O95989 172 aa11.43□□□□□ -0.58
VPS26A-201ENST00000263559 ORMDL2Q53FV1 153 aa11.43□□□□□ -0.58
VPS26A-201ENST00000263559 RPL32P62910 135 aaKnown RBP11.43□□□□□ -0.58
VPS26A-201ENST00000263559 KRTAP24-1Q3LI83 254 aa11.43□□□□□ -0.58
VPS26A-201ENST00000263559 UFSP1Q6NVU6 142 aa11.43□□□□□ -0.58
VPS26A-201ENST00000263559 GTSCR1Q86UQ5 136 aa11.43□□□□□ -0.58
VPS26A-201ENST00000263559 CSNK1G2-AS1Q8NCQ2 148 aa11.43□□□□□ -0.58
VPS26A-201ENST00000263559 RNASE8Q8TDE3 154 aaKnown RBP11.43□□□□□ -0.58
VPS26A-201ENST00000263559 TRBV6-5A0A0K0K1A5 114 aa11.43□□□□□ -0.58
VPS26A-201ENST00000263559 SDHAF1A6NFY7 115 aa11.43□□□□□ -0.58
VPS26A-201ENST00000263559 K7EMI3 77 aa11.43□□□□□ -0.58
VPS26A-201ENST00000263559 CFAP126Q5VTH2 177 aa11.43□□□□□ -0.58
VPS26A-201ENST00000263559 C1QTNF4Q9BXJ3 329 aa11.43□□□□□ -0.58
VPS26A-201ENST00000263559 GOLT1BQ9Y3E0 138 aa11.43□□□□□ -0.58
VPS26A-201ENST00000263559 IL17DQ8TAD2 202 aa11.42□□□□□ -0.58
VPS26A-201ENST00000263559 DEFB104AQ8WTQ1 72 aa11.42□□□□□ -0.58
VPS26A-201ENST00000263559 IGLL1P15814 213 aa11.42□□□□□ -0.58
VPS26A-201ENST00000263559 TMEM263Q8WUH6 116 aaKnown RBP11.42□□□□□ -0.58
VPS26A-201ENST00000263559 VCYO14598 125 aa11.41□□□□□ -0.58
VPS26A-201ENST00000263559 LGALS9BQ3B8N2 356 aa11.41□□□□□ -0.58
VPS26A-201ENST00000263559 LGALS9CQ6DKI2 356 aa11.41□□□□□ -0.58
VPS26A-201ENST00000263559 hDV102S1A0JD36 115 aa11.41□□□□□ -0.58
VPS26A-201ENST00000263559 WFDC9Q8NEX5 89 aa11.41□□□□□ -0.58
VPS26A-201ENST00000263559 NDUFAF3Q9BU61 184 aa11.4□□□□□ -0.58
VPS26A-201ENST00000263559 TRBV27A0A0K0K1C4 114 aa11.4□□□□□ -0.59
VPS26A-201ENST00000263559 DEFA6Q01524 100 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms