RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 DEFB125Q8N687 156 aa12.68□□□□□ -0.38
SRSF1-201ENST00000258962 PRSS3P2Q8NHM4 247 aa12.68□□□□□ -0.38
SRSF1-201ENST00000258962 URB1-AS1Q96HZ7 61 aa12.68□□□□□ -0.38
SRSF1-201ENST00000258962 LINC00467Q9BRT7 94 aa12.68□□□□□ -0.38
SRSF1-201ENST00000258962 A8MZ25 164 aa12.67□□□□□ -0.38
SRSF1-201ENST00000258962 SMKR1H3BMG3 65 aa12.67□□□□□ -0.38
SRSF1-201ENST00000258962 PRM2P04554 102 aa12.67□□□□□ -0.38
SRSF1-201ENST00000258962 C1orf158Q8N1D5 194 aa12.67□□□□□ -0.38
SRSF1-201ENST00000258962 NCR2O95944 276 aa12.67□□□□□ -0.38
SRSF1-201ENST00000258962 SCGB1D1O95968 90 aa12.67□□□□□ -0.38
SRSF1-201ENST00000258962 RPL35AP18077 110 aaKnown RBP12.67□□□□□ -0.38
SRSF1-201ENST00000258962 NUTF2P61970 127 aaKnown RBP12.67□□□□□ -0.38
SRSF1-201ENST00000258962 FA2HQ7L5A8 372 aa12.67□□□□□ -0.38
SRSF1-201ENST00000258962 GAS8-AS1O95177 125 aa12.66□□□□□ -0.38
SRSF1-201ENST00000258962 HTN1P15515 57 aa12.66□□□□□ -0.38
SRSF1-201ENST00000258962 LINC01587Q99440 93 aa12.66□□□□□ -0.38
SRSF1-201ENST00000258962 SBSPONQ8IVN8 264 aa12.65□□□□□ -0.38
SRSF1-201ENST00000258962 AP1S3Q96PC3 154 aa12.65□□□□□ -0.38
SRSF1-201ENST00000258962 NPYP01303 97 aa12.64□□□□□ -0.39
SRSF1-201ENST00000258962 C14orf178Q8N769 122 aaPredicted RBP12.64□□□□□ -0.39
SRSF1-201ENST00000258962 DPH3P1Q9H4G8 78 aa12.64□□□□□ -0.39
SRSF1-201ENST00000258962 JPT2Q9H910 190 aa12.64□□□□□ -0.39
SRSF1-201ENST00000258962 AP5S1Q9NUS5 200 aa12.64□□□□□ -0.39
SRSF1-201ENST00000258962 KIF25-AS1Q9Y6Z4 181 aa12.64□□□□□ -0.39
SRSF1-201ENST00000258962 MORN3Q6PF18 240 aaPredicted RBP12.63□□□□□ -0.39
SRSF1-201ENST00000258962 Q6ZWC4 215 aa12.63□□□□□ -0.39
SRSF1-201ENST00000258962 C11orf72Q8NBR9 251 aa12.63□□□□□ -0.39
SRSF1-201ENST00000258962 MRAP2Q96G30 205 aa12.63□□□□□ -0.39
SRSF1-201ENST00000258962 MAP1LC3AQ9H492 121 aa12.63□□□□□ -0.39
SRSF1-201ENST00000258962 TRAV26-2A0A0B4J265 109 aa12.62□□□□□ -0.39
SRSF1-201ENST00000258962 PCP4L1A6NKN8 68 aa12.62□□□□□ -0.39
SRSF1-201ENST00000258962 PPP1R17O96001 155 aa12.62□□□□□ -0.39
SRSF1-201ENST00000258962 GATA1P15976 413 aaPredicted RBP12.62□□□□□ -0.39
SRSF1-201ENST00000258962 LINC00315P59091 139 aa12.62□□□□□ -0.39
SRSF1-201ENST00000258962 ZNF415Q09FC8 603 aa12.62□□□□□ -0.39
SRSF1-201ENST00000258962 FAM19A2Q8N3H0 131 aa12.62□□□□□ -0.39
SRSF1-201ENST00000258962 SYT8Q8NBV8 401 aa12.62□□□□□ -0.39
SRSF1-201ENST00000258962 ZMAT4Q9H898 229 aa12.62□□□□□ -0.39
SRSF1-201ENST00000258962 KRTDAPP60985 99 aa12.62□□□□□ -0.39
SRSF1-201ENST00000258962 CSNK1G2-AS1Q8NCQ2 148 aa12.62□□□□□ -0.39
SRSF1-201ENST00000258962 TMEM208Q9BTX3 173 aa12.62□□□□□ -0.39
SRSF1-201ENST00000258962 NXT2Q9NPJ8 142 aaKnown RBP12.62□□□□□ -0.39
SRSF1-201ENST00000258962 GSN-AS1Q9NRJ2 163 aa12.62□□□□□ -0.39
SRSF1-201ENST00000258962 IGHV3OR16-12A0A075B7B8 117 aa12.61□□□□□ -0.39
SRSF1-201ENST00000258962 SMIM17P0DL12 118 aa12.61□□□□□ -0.39
SRSF1-201ENST00000258962 AZU1P20160 251 aa12.61□□□□□ -0.39
SRSF1-201ENST00000258962 POM121L12Q8N7R1 296 aa12.61□□□□□ -0.39
SRSF1-201ENST00000258962 HSPB8Q9UJY1 196 aa12.61□□□□□ -0.39
SRSF1-201ENST00000258962 TNFRSF6BO95407 300 aa12.6□□□□□ -0.39
SRSF1-201ENST00000258962 ZNF876PQ49A33 203 aa12.6□□□□□ -0.39
SRSF1-201ENST00000258962 NRACQ8N912 160 aa12.6□□□□□ -0.39
SRSF1-201ENST00000258962 TSTD3H0UI37 97 aa12.59□□□□□ -0.39
SRSF1-201ENST00000258962 LEPROTL1O95214 131 aa12.59□□□□□ -0.39
SRSF1-201ENST00000258962 MGPP08493 103 aa12.59□□□□□ -0.39
SRSF1-201ENST00000258962 BTF3P20290 206 aaKnown RBP12.59□□□□□ -0.39
SRSF1-201ENST00000258962 C1QTNF4Q9BXJ3 329 aa12.59□□□□□ -0.39
SRSF1-201ENST00000258962 A0A087WWL8 130 aa12.58□□□□□ -0.4
SRSF1-201ENST00000258962 IGHV1-24A0A0C4DH33 117 aa12.58□□□□□ -0.4
SRSF1-201ENST00000258962 LOC389332A0A1B0GUA5 103 aa12.58□□□□□ -0.4
SRSF1-201ENST00000258962 PRSS47A8MTI9 375 aa12.58□□□□□ -0.4
SRSF1-201ENST00000258962 IFI27P40305 119 aaPredicted RBP12.58□□□□□ -0.4
SRSF1-201ENST00000258962 PKIAP61925 76 aa12.58□□□□□ -0.4
SRSF1-201ENST00000258962 IL17DQ8TAD2 202 aa12.58□□□□□ -0.4
SRSF1-201ENST00000258962 GOLT1BQ9Y3E0 138 aa12.58□□□□□ -0.4
SRSF1-201ENST00000258962 NACAE9PAV3 2078 aa12.58□□□□□ -0.4
SRSF1-201ENST00000258962 M0R2P5 195 aa12.57□□□□□ -0.4
SRSF1-201ENST00000258962 CRYGDP07320 174 aa12.57□□□□□ -0.4
SRSF1-201ENST00000258962 RNASE8Q8TDE3 154 aaKnown RBP12.57□□□□□ -0.4
SRSF1-201ENST00000258962 PTH2Q96A98 100 aa12.57□□□□□ -0.4
SRSF1-201ENST00000258962 C20orf202A1L168 122 aa12.57□□□□□ -0.4
SRSF1-201ENST00000258962 C3orf79P0CE67 100 aa12.57□□□□□ -0.4
SRSF1-201ENST00000258962 PMCHL1Q16048 86 aa12.57□□□□□ -0.4
SRSF1-201ENST00000258962 ZNF705AQ6ZN79 300 aaPredicted RBP12.57□□□□□ -0.4
SRSF1-201ENST00000258962 RASL10AQ92737 203 aa12.57□□□□□ -0.4
SRSF1-201ENST00000258962 SPATA25Q9BR10 227 aa12.57□□□□□ -0.4
SRSF1-201ENST00000258962 TM2D3Q9BRN9 247 aa12.57□□□□□ -0.4
SRSF1-201ENST00000258962 SPXQ9BT56 116 aa12.57□□□□□ -0.4
SRSF1-201ENST00000258962 TMEM70Q9BUB7 260 aa12.57□□□□□ -0.4
SRSF1-201ENST00000258962 CSTL1Q9H114 145 aa12.57□□□□□ -0.4
SRSF1-201ENST00000258962 MAP1LC3CQ9BXW4 147 aa12.56□□□□□ -0.4
SRSF1-201ENST00000258962 LINC01546A6NGU7 62 aa12.55□□□□□ -0.4
SRSF1-201ENST00000258962 PIK3CD-AS1Q5SR53 167 aa12.55□□□□□ -0.4
SRSF1-201ENST00000258962 SUMO4Q6EEV6 95 aa12.55□□□□□ -0.4
SRSF1-201ENST00000258962 Q8N8P6 123 aa12.55□□□□□ -0.4
SRSF1-201ENST00000258962 TMEM263Q8WUH6 116 aaKnown RBP12.55□□□□□ -0.4
SRSF1-201ENST00000258962 C20orf78Q9BR46 151 aa12.55□□□□□ -0.4
SRSF1-201ENST00000258962 FAM74A4Q5TZK3 123 aa12.54□□□□□ -0.4
SRSF1-201ENST00000258962 RPL39LQ96EH5 51 aaKnown RBP12.54□□□□□ -0.4
SRSF1-201ENST00000258962 MRPL16Q9NX20 251 aaKnown RBP12.54□□□□□ -0.4
SRSF1-201ENST00000258962 IGLV2-18A0A075B6J9 118 aa12.53□□□□□ -0.4
SRSF1-201ENST00000258962 K7EMI3 77 aa12.53□□□□□ -0.4
SRSF1-201ENST00000258962 APOC4P55056 127 aa12.53□□□□□ -0.4
SRSF1-201ENST00000258962 TEX43Q6ZNM6 134 aa12.53□□□□□ -0.4
SRSF1-201ENST00000258962 COL7A1Q02388 2944 aa12.53□□□□□ -0.4
SRSF1-201ENST00000258962 PLAC8L1A1L4L8 177 aa12.52□□□□□ -0.4
SRSF1-201ENST00000258962 HBDP02042 147 aa12.52□□□□□ -0.4
SRSF1-201ENST00000258962 CDPF1Q6NVV7 123 aa12.52□□□□□ -0.4
SRSF1-201ENST00000258962 PET117Q6UWS5 81 aa12.52□□□□□ -0.4
SRSF1-201ENST00000258962 WWC2-AS2Q96NR7 200 aa12.52□□□□□ -0.4
SRSF1-201ENST00000258962 VAMP8Q9BV40 100 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms