RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 RBMY1FQ15415 496 aaKnown RBP13.92□□□□□ -0.18
TRIM47-201ENST00000254816 SPANXN1Q5VSR9 72 aa13.92□□□□□ -0.18
TRIM47-201ENST00000254816 ST20Q9HBF5 79 aa13.92□□□□□ -0.18
TRIM47-201ENST00000254816 OR11H12B2RN74 326 aa13.91□□□□□ -0.18
TRIM47-201ENST00000254816 CD7P09564 240 aa13.91□□□□□ -0.18
TRIM47-201ENST00000254816 EVI2AP22794 236 aa13.91□□□□□ -0.18
TRIM47-201ENST00000254816 MRPS16Q9Y3D3 137 aaKnown RBP13.91□□□□□ -0.18
TRIM47-201ENST00000254816 HSBP1L1C9JCN9 74 aa13.9□□□□□ -0.18
TRIM47-201ENST00000254816 M0R381 172 aa13.9□□□□□ -0.18
TRIM47-201ENST00000254816 GATA1P15976 413 aaPredicted RBP13.9□□□□□ -0.18
TRIM47-201ENST00000254816 WFDC10AQ9H1F0 79 aa13.9□□□□□ -0.18
TRIM47-201ENST00000254816 TMEM208Q9BTX3 173 aa13.89□□□□□ -0.19
TRIM47-201ENST00000254816 PHLDA3Q9Y5J5 127 aa13.89□□□□□ -0.19
TRIM47-201ENST00000254816 IGHV1OR15-1A0A075B7D0 117 aa13.88□□□□□ -0.19
TRIM47-201ENST00000254816 HBDP02042 147 aa13.88□□□□□ -0.19
TRIM47-201ENST00000254816 CACNG7P62955 275 aa13.88□□□□□ -0.19
TRIM47-201ENST00000254816 STHQ8IWL8 128 aa13.88□□□□□ -0.19
TRIM47-201ENST00000254816 KRTAP24-1Q3LI83 254 aa13.87□□□□□ -0.19
TRIM47-201ENST00000254816 Q8N1Y9 231 aa13.87□□□□□ -0.19
TRIM47-201ENST00000254816 MAP1LC3AQ9H492 121 aa13.87□□□□□ -0.19
TRIM47-201ENST00000254816 SCRT2Q9NQ03 307 aa13.87□□□□□ -0.19
TRIM47-201ENST00000254816 MDFICQ9P1T7 246 aa13.87□□□□□ -0.19
TRIM47-201ENST00000254816 IGHV4-4A0A075B6R2 117 aa13.87□□□□□ -0.19
TRIM47-201ENST00000254816 TNFRSF6BO95407 300 aa13.87□□□□□ -0.19
TRIM47-201ENST00000254816 PRM2P04554 102 aa13.87□□□□□ -0.19
TRIM47-201ENST00000254816 HTN1P15515 57 aa13.87□□□□□ -0.19
TRIM47-201ENST00000254816 BEAN1Q3B7T3 259 aa13.86□□□□□ -0.19
TRIM47-201ENST00000254816 OR2K2Q8NGT1 345 aa13.86□□□□□ -0.19
TRIM47-201ENST00000254816 SLC25A34Q6PIV7 304 aa13.85□□□□□ -0.19
TRIM47-201ENST00000254816 Q6ZVH6 145 aa13.85□□□□□ -0.19
TRIM47-201ENST00000254816 TRAV26-2A0A0B4J265 109 aa13.85□□□□□ -0.19
TRIM47-201ENST00000254816 IGHV3-16A0A0C4DH30 117 aa13.85□□□□□ -0.19
TRIM47-201ENST00000254816 PPBPP02775 128 aa13.85□□□□□ -0.19
TRIM47-201ENST00000254816 MED14OSP0DP75 135 aa13.85□□□□□ -0.19
TRIM47-201ENST00000254816 GOLT1BQ9Y3E0 138 aa13.85□□□□□ -0.19
TRIM47-201ENST00000254816 DLEU1O43261 78 aa13.84□□□□□ -0.19
TRIM47-201ENST00000254816 TCTAP57738 103 aa13.84□□□□□ -0.19
TRIM47-201ENST00000254816 TRPT1Q86TN4 253 aaKnown RBP13.84□□□□□ -0.19
TRIM47-201ENST00000254816 C18orf15Q96N68 181 aa13.84□□□□□ -0.19
TRIM47-201ENST00000254816 C19orf73Q9NVV2 129 aa13.84□□□□□ -0.19
TRIM47-201ENST00000254816 TRRAPQ9Y4A5 3859 aa13.84□□□□□ -0.19
TRIM47-201ENST00000254816 NPSP0C0P6 89 aa13.84□□□□□ -0.19
TRIM47-201ENST00000254816 XCL2Q9UBD3 114 aa13.84□□□□□ -0.19
TRIM47-201ENST00000254816 SMIM15Q7Z3B0 74 aa13.83□□□□□ -0.2
TRIM47-201ENST00000254816 CBY3A6NI87 242 aa13.83□□□□□ -0.2
TRIM47-201ENST00000254816 MPV17L2Q567V2 206 aa13.83□□□□□ -0.2
TRIM47-201ENST00000254816 IFI27L1Q96BM0 104 aa13.83□□□□□ -0.2
TRIM47-201ENST00000254816 FBN1P35555 2871 aaKnown RBP13.82□□□□□ -0.2
TRIM47-201ENST00000254816 C14orf178Q8N769 122 aaPredicted RBP13.82□□□□□ -0.2
TRIM47-201ENST00000254816 CMC4P56277 68 aaPredicted RBP13.81□□□□□ -0.2
TRIM47-201ENST00000254816 ANKRD39Q53RE8 183 aa13.81□□□□□ -0.2
TRIM47-201ENST00000254816 PRIMA1Q86XR5 153 aa13.81□□□□□ -0.2
TRIM47-201ENST00000254816 C9orf85Q96MD7 179 aa13.81□□□□□ -0.2
TRIM47-201ENST00000254816 JPT2Q9H910 190 aa13.81□□□□□ -0.2
TRIM47-201ENST00000254816 CLUHP3Q96NS8 147 aa13.8□□□□□ -0.2
TRIM47-201ENST00000254816 INSP01308 110 aa13.8□□□□□ -0.2
TRIM47-201ENST00000254816 RPL35AP18077 110 aaKnown RBP13.8□□□□□ -0.2
TRIM47-201ENST00000254816 LGALS9BQ3B8N2 356 aa13.8□□□□□ -0.2
TRIM47-201ENST00000254816 LGALS9CQ6DKI2 356 aa13.8□□□□□ -0.2
TRIM47-201ENST00000254816 LINC01587Q99440 93 aa13.8□□□□□ -0.2
TRIM47-201ENST00000254816 NXT2Q9NPJ8 142 aaKnown RBP13.8□□□□□ -0.2
TRIM47-201ENST00000254816 NOTCH3Q9UM47 2321 aa13.8□□□□□ -0.2
TRIM47-201ENST00000254816 NUDT3O95989 172 aa13.79□□□□□ -0.2
TRIM47-201ENST00000254816 C9orf66Q5T8R8 295 aa13.79□□□□□ -0.2
TRIM47-201ENST00000254816 NXPH4O95158 308 aa13.79□□□□□ -0.2
TRIM47-201ENST00000254816 NRACQ8N912 160 aa13.79□□□□□ -0.2
TRIM47-201ENST00000254816 TRGV11A0A075B6L2 103 aa13.78□□□□□ -0.2
TRIM47-201ENST00000254816 IGHV3OR16-12A0A075B7B8 117 aa13.78□□□□□ -0.2
TRIM47-201ENST00000254816 LINC01546A6NGU7 62 aa13.78□□□□□ -0.2
TRIM47-201ENST00000254816 COX8AP10176 69 aa13.78□□□□□ -0.2
TRIM47-201ENST00000254816 DEFB125Q8N687 156 aa13.78□□□□□ -0.2
TRIM47-201ENST00000254816 FAM110AQ9BQ89 295 aa13.78□□□□□ -0.2
TRIM47-201ENST00000254816 DKK2Q9UBU2 259 aa13.78□□□□□ -0.2
TRIM47-201ENST00000254816 FCER1GP30273 86 aa13.78□□□□□ -0.2
TRIM47-201ENST00000254816 GAGE1Q13065 139 aa13.78□□□□□ -0.2
TRIM47-201ENST00000254816 TMEM158Q8WZ71 300 aa13.78□□□□□ -0.2
TRIM47-201ENST00000254816 DPH3P1Q9H4G8 78 aa13.78□□□□□ -0.2
TRIM47-201ENST00000254816 IGLV2-18A0A075B6J9 118 aa13.77□□□□□ -0.21
TRIM47-201ENST00000254816 MGPP08493 103 aa13.77□□□□□ -0.21
TRIM47-201ENST00000254816 AP1S3Q96PC3 154 aa13.77□□□□□ -0.21
TRIM47-201ENST00000254816 INSL3P51460 131 aa13.76□□□□□ -0.21
TRIM47-201ENST00000254816 C1orf158Q8N1D5 194 aa13.76□□□□□ -0.21
TRIM47-201ENST00000254816 Q8N8P6 123 aa13.76□□□□□ -0.21
TRIM47-201ENST00000254816 A0A087WWL8 130 aa13.76□□□□□ -0.21
TRIM47-201ENST00000254816 C2orf91Q6ZV80 131 aa13.76□□□□□ -0.21
TRIM47-201ENST00000254816 BVES-AS1Q5T3Y7 98 aa13.75□□□□□ -0.21
TRIM47-201ENST00000254816 GIG44P09565 113 aaPredicted RBP13.75□□□□□ -0.21
TRIM47-201ENST00000254816 KIF25-AS1Q9Y6Z4 181 aa13.75□□□□□ -0.21
TRIM47-201ENST00000254816 ERASQ7Z444 233 aa13.74□□□□□ -0.21
TRIM47-201ENST00000254816 COX11Q9Y6N1 276 aa13.74□□□□□ -0.21
TRIM47-201ENST00000254816 FGF6P10767 208 aa13.74□□□□□ -0.21
TRIM47-201ENST00000254816 AZU1P20160 251 aa13.74□□□□□ -0.21
TRIM47-201ENST00000254816 ZNF876PQ49A33 203 aa13.74□□□□□ -0.21
TRIM47-201ENST00000254816 SYT8Q8NBV8 401 aa13.73□□□□□ -0.21
TRIM47-201ENST00000254816 PRSS1P07477 247 aa13.73□□□□□ -0.21
TRIM47-201ENST00000254816 SMIM17P0DL12 118 aa13.73□□□□□ -0.21
TRIM47-201ENST00000254816 LINC00315P59091 139 aa13.73□□□□□ -0.21
TRIM47-201ENST00000254816 FAM74A4Q5TZK3 123 aa13.73□□□□□ -0.21
TRIM47-201ENST00000254816 GTSCR1Q86UQ5 136 aa13.73□□□□□ -0.21
TRIM47-201ENST00000254816 ODF1Q14990 250 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms