RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 MED14OSP0DP75 135 aa14.8□□□□□ -0.04
PPFIA1-201ENST00000253925 ZNF80P51504 273 aaPredicted RBP14.8□□□□□ -0.04
PPFIA1-201ENST00000253925 SPANXDQ9BXN6 97 aa14.8□□□□□ -0.04
PPFIA1-201ENST00000253925 VPREB3Q9UKI3 123 aa14.8□□□□□ -0.04
PPFIA1-201ENST00000253925 LOXL1Q08397 574 aaPredicted RBP14.79□□□□□ -0.04
PPFIA1-201ENST00000253925 TEN1Q86WV5 123 aa14.79□□□□□ -0.04
PPFIA1-201ENST00000253925 OVOL2Q9BRP0 275 aa14.79□□□□□ -0.04
PPFIA1-201ENST00000253925 HOXD3P31249 432 aaPredicted RBP14.79□□□□□ -0.04
PPFIA1-201ENST00000253925 SUMO4Q6EEV6 95 aa14.79□□□□□ -0.04
PPFIA1-201ENST00000253925 CUL9Q8IWT3 2517 aa14.79□□□□□ -0.04
PPFIA1-201ENST00000253925 GHRHP01286 108 aa14.79□□□□□ -0.04
PPFIA1-201ENST00000253925 C6orf226Q5I0X4 101 aa14.79□□□□□ -0.04
PPFIA1-201ENST00000253925 ZNRF2Q8NHG8 242 aa14.79□□□□□ -0.04
PPFIA1-201ENST00000253925 IGLC6P0CF74 106 aa14.78□□□□□ -0.04
PPFIA1-201ENST00000253925 CFC1BP0CG36 223 aa14.78□□□□□ -0.04
PPFIA1-201ENST00000253925 CFC1P0CG37 223 aa14.78□□□□□ -0.04
PPFIA1-201ENST00000253925 C10orf105Q8TEF2 133 aa14.78□□□□□ -0.04
PPFIA1-201ENST00000253925 LY6LH3BQJ8 138 aa14.78□□□□□ -0.04
PPFIA1-201ENST00000253925 ZFP2Q6ZN57 461 aa14.78□□□□□ -0.04
PPFIA1-201ENST00000253925 EXPH5Q8NEV8 1989 aa14.78□□□□□ -0.04
PPFIA1-201ENST00000253925 K7EMT4 169 aa14.78□□□□□ -0.04
PPFIA1-201ENST00000253925 LAMTOR3Q9UHA4 124 aa14.77□□□□□ -0.04
PPFIA1-201ENST00000253925 IGHV4-30-2A0A087WSY4 118 aa14.77□□□□□ -0.04
PPFIA1-201ENST00000253925 IGHV3-38A0A0C4DH36 116 aa14.77□□□□□ -0.04
PPFIA1-201ENST00000253925 CACNA1AO00555 2505 aa14.77□□□□□ -0.05
PPFIA1-201ENST00000253925 IGHG2P01859 326 aa14.77□□□□□ -0.05
PPFIA1-201ENST00000253925 C3orf56Q8N813 242 aa14.77□□□□□ -0.05
PPFIA1-201ENST00000253925 NAV3Q8IVL0 2385 aa14.76□□□□□ -0.05
PPFIA1-201ENST00000253925 TMEM126AQ9H061 195 aa14.76□□□□□ -0.05
PPFIA1-201ENST00000253925 RS1O15537 224 aa14.76□□□□□ -0.05
PPFIA1-201ENST00000253925 RNF183Q96D59 192 aa14.76□□□□□ -0.05
PPFIA1-201ENST00000253925 TOMM6Q96B49 74 aa14.75□□□□□ -0.05
PPFIA1-201ENST00000253925 CCDC140Q96MF4 163 aa14.75□□□□□ -0.05
PPFIA1-201ENST00000253925 SOCS3O14543 225 aa14.75□□□□□ -0.05
PPFIA1-201ENST00000253925 Q96MF0 132 aa14.74□□□□□ -0.05
PPFIA1-201ENST00000253925 IGHG4P01861 327 aa14.74□□□□□ -0.05
PPFIA1-201ENST00000253925 EBI3Q14213 229 aa14.74□□□□□ -0.05
PPFIA1-201ENST00000253925 DNAJC30Q96LL9 226 aa14.73□□□□□ -0.05
PPFIA1-201ENST00000253925 CSPG4Q6UVK1 2322 aa14.73□□□□□ -0.05
PPFIA1-201ENST00000253925 TMEM243Q9BU79 118 aa14.73□□□□□ -0.05
PPFIA1-201ENST00000253925 HERVK_113P63121 156 aa14.73□□□□□ -0.05
PPFIA1-201ENST00000253925 E9PLD3 99 aa14.72□□□□□ -0.05
PPFIA1-201ENST00000253925 CRIP1P50238 77 aa14.72□□□□□ -0.05
PPFIA1-201ENST00000253925 UNQ9165/PRO28630Q6UXU0 137 aa14.72□□□□□ -0.05
PPFIA1-201ENST00000253925 GPHB5Q86YW7 130 aa14.72□□□□□ -0.05
PPFIA1-201ENST00000253925 PIEZO2Q9H5I5 2752 aa14.72□□□□□ -0.05
PPFIA1-201ENST00000253925 DEFB130BP0DP73 79 aa14.72□□□□□ -0.05
PPFIA1-201ENST00000253925 DEFB130AP0DP74 79 aa14.72□□□□□ -0.05
PPFIA1-201ENST00000253925 LMO4P61968 165 aa14.72□□□□□ -0.05
PPFIA1-201ENST00000253925 BAALCQ8WXS3 180 aa14.72□□□□□ -0.05
PPFIA1-201ENST00000253925 IGLV2-11P01706 119 aa14.72□□□□□ -0.05
PPFIA1-201ENST00000253925 HERV-K104P63124 156 aa14.72□□□□□ -0.05
PPFIA1-201ENST00000253925 SS18Q15532 418 aa14.72□□□□□ -0.05
PPFIA1-201ENST00000253925 PTH2Q96A98 100 aa14.71□□□□□ -0.05
PPFIA1-201ENST00000253925 TIMM17AQ99595 171 aa14.71□□□□□ -0.05
PPFIA1-201ENST00000253925 VWC2LB2RUY7 222 aa14.7□□□□□ -0.06
PPFIA1-201ENST00000253925 CITED2Q99967 270 aaPredicted RBP14.7□□□□□ -0.06
PPFIA1-201ENST00000253925 RNF114Q9Y508 228 aa14.7□□□□□ -0.06
PPFIA1-201ENST00000253925 TLN1Q9Y490 2541 aaKnown RBP14.7□□□□□ -0.06
PPFIA1-201ENST00000253925 JPT2Q9H910 190 aa14.7□□□□□ -0.06
PPFIA1-201ENST00000253925 RNASE13Q5GAN3 156 aaKnown RBP14.7□□□□□ -0.06
PPFIA1-201ENST00000253925 DEFB1P60022 68 aa14.69□□□□□ -0.06
PPFIA1-201ENST00000253925 LINC00310P59036 64 aa14.69□□□□□ -0.06
PPFIA1-201ENST00000253925 FAM236AA0A1B0GUQ0 79 aa14.69□□□□□ -0.06
PPFIA1-201ENST00000253925 FAM236BA0A1B0GV22 79 aa14.69□□□□□ -0.06
PPFIA1-201ENST00000253925 MRAPQ8TCY5 172 aa14.69□□□□□ -0.06
PPFIA1-201ENST00000253925 CEP350Q5VT06 3117 aa14.69□□□□□ -0.06
PPFIA1-201ENST00000253925 TANC2Q9HCD6 1990 aa14.69□□□□□ -0.06
PPFIA1-201ENST00000253925 Q8N1Y9 231 aa14.69□□□□□ -0.06
PPFIA1-201ENST00000253925 RNF152Q8N8N0 203 aa14.68□□□□□ -0.06
PPFIA1-201ENST00000253925 TRBV12-3P01733 135 aa14.68□□□□□ -0.06
PPFIA1-201ENST00000253925 CFHR3Q02985 330 aa14.68□□□□□ -0.06
PPFIA1-201ENST00000253925 A0A0J9YXV3 536 aa14.68□□□□□ -0.06
PPFIA1-201ENST00000253925 TMEM89A2RUT3 159 aa14.68□□□□□ -0.06
PPFIA1-201ENST00000253925 LINC01548A6NM66 108 aa14.68□□□□□ -0.06
PPFIA1-201ENST00000253925 RPL39P62891 51 aaKnown RBP14.68□□□□□ -0.06
PPFIA1-201ENST00000253925 MT-ATP8P03928 68 aa14.68□□□□□ -0.06
PPFIA1-201ENST00000253925 MRPL23Q16540 153 aaKnown RBP14.67□□□□□ -0.06
PPFIA1-201ENST00000253925 U3KQE9 123 aa14.67□□□□□ -0.06
PPFIA1-201ENST00000253925 Q6ZUT4 128 aa14.67□□□□□ -0.06
PPFIA1-201ENST00000253925 SPANXCQ9NY87 97 aa14.67□□□□□ -0.06
PPFIA1-201ENST00000253925 U3KQK5 164 aa14.67□□□□□ -0.06
PPFIA1-201ENST00000253925 A6NDX4 124 aa14.66□□□□□ -0.06
PPFIA1-201ENST00000253925 DEFB136Q30KP8 78 aa14.66□□□□□ -0.06
PPFIA1-201ENST00000253925 ZFAND3Q9H8U3 227 aa14.66□□□□□ -0.06
PPFIA1-201ENST00000253925 J3KT08 172 aa14.66□□□□□ -0.06
PPFIA1-201ENST00000253925 ATP6V0E2Q8NHE4 81 aa14.66□□□□□ -0.06
PPFIA1-201ENST00000253925 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.65□□□□□ -0.06
PPFIA1-201ENST00000253925 IGKV2-29A2NJV5 120 aaPredicted RBP14.65□□□□□ -0.06
PPFIA1-201ENST00000253925 C11orf86A6NJI1 115 aa14.65□□□□□ -0.06
PPFIA1-201ENST00000253925 C1orf43Q9BWL3 253 aa14.65□□□□□ -0.06
PPFIA1-201ENST00000253925 SLURP1P55000 103 aa14.65□□□□□ -0.06
PPFIA1-201ENST00000253925 A4D1N5 150 aa14.64□□□□□ -0.07
PPFIA1-201ENST00000253925 TNFRSF13BO14836 293 aaPredicted RBP14.64□□□□□ -0.07
PPFIA1-201ENST00000253925 LINC01620Q4KN68 170 aa14.64□□□□□ -0.07
PPFIA1-201ENST00000253925 SPANXB1Q9NS25 103 aaPredicted RBP14.64□□□□□ -0.07
PPFIA1-201ENST00000253925 SMAD5-AS1Q9Y6J3 95 aa14.64□□□□□ -0.07
PPFIA1-201ENST00000253925 CLUHP3Q96NS8 147 aa14.63□□□□□ -0.07
PPFIA1-201ENST00000253925 UBL5Q9BZL1 73 aa14.63□□□□□ -0.07
PPFIA1-201ENST00000253925 ATRXP46100 2492 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms