RNA–Protein interactions for RNA: ENST00000248437.8

TUBA4A-201, Transcript of tubulin alpha 4a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA4A, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-201ENST00000248437 CD28P10747 220 aa13.72□□□□□ -0.21
TUBA4A-201ENST00000248437 ZNF418Q8TF45 676 aaPredicted RBP13.72□□□□□ -0.21
TUBA4A-201ENST00000248437 C18orf15Q96N68 181 aa13.72□□□□□ -0.21
TUBA4A-201ENST00000248437 F8P00451 2351 aa13.71□□□□□ -0.21
TUBA4A-201ENST00000248437 TRGV11A0A075B6L2 103 aa13.71□□□□□ -0.21
TUBA4A-201ENST00000248437 CCL24O00175 119 aa13.71□□□□□ -0.21
TUBA4A-201ENST00000248437 TCAPO15273 167 aa13.71□□□□□ -0.21
TUBA4A-201ENST00000248437 NUTF2P61970 127 aaKnown RBP13.71□□□□□ -0.21
TUBA4A-201ENST00000248437 ORMDL2Q53FV1 153 aa13.71□□□□□ -0.21
TUBA4A-201ENST00000248437 RPL39LQ96EH5 51 aaKnown RBP13.71□□□□□ -0.21
TUBA4A-201ENST00000248437 MAP6D1Q9H9H5 199 aa13.71□□□□□ -0.21
TUBA4A-201ENST00000248437 MDFICQ9P1T7 246 aa13.71□□□□□ -0.21
TUBA4A-201ENST00000248437 TSSC4Q9Y5U2 329 aaPredicted RBP13.71□□□□□ -0.21
TUBA4A-201ENST00000248437 CD300EQ496F6 205 aaPredicted RBP13.71□□□□□ -0.22
TUBA4A-201ENST00000248437 SLC25A34Q6PIV7 304 aa13.71□□□□□ -0.22
TUBA4A-201ENST00000248437 HILS1P60008 231 aa13.7□□□□□ -0.22
TUBA4A-201ENST00000248437 HIST2H2BDQ6DRA6 164 aa13.7□□□□□ -0.22
TUBA4A-201ENST00000248437 RPL32P62910 135 aaKnown RBP13.69□□□□□ -0.22
TUBA4A-201ENST00000248437 SETD2Q9BYW2 2564 aaPredicted RBP13.69□□□□□ -0.22
TUBA4A-201ENST00000248437 C11orf44Q8N8P7 122 aa13.69□□□□□ -0.22
TUBA4A-201ENST00000248437 CITED2Q99967 270 aaPredicted RBP13.69□□□□□ -0.22
TUBA4A-201ENST00000248437 ZNF256Q9Y2P7 627 aaPredicted RBP13.69□□□□□ -0.22
TUBA4A-201ENST00000248437 NUDT3O95989 172 aa13.68□□□□□ -0.22
TUBA4A-201ENST00000248437 A0A1W2PRX2 142 aa13.68□□□□□ -0.22
TUBA4A-201ENST00000248437 ODF1Q14990 250 aa13.68□□□□□ -0.22
TUBA4A-201ENST00000248437 JPT2Q9H910 190 aa13.68□□□□□ -0.22
TUBA4A-201ENST00000248437 RBMY1BA6NDE4 496 aaKnown RBP13.67□□□□□ -0.22
TUBA4A-201ENST00000248437 RBMY1EA6NEQ0 496 aaKnown RBP13.67□□□□□ -0.22
TUBA4A-201ENST00000248437 PRSS1P07477 247 aa13.67□□□□□ -0.22
TUBA4A-201ENST00000248437 RBMY1DP0C7P1 496 aaKnown RBP13.67□□□□□ -0.22
TUBA4A-201ENST00000248437 RBMY1A1P0DJD3 496 aaKnown RBP13.67□□□□□ -0.22
TUBA4A-201ENST00000248437 RBMY1CP0DJD4 496 aa13.67□□□□□ -0.22
TUBA4A-201ENST00000248437 COX8AP10176 69 aa13.67□□□□□ -0.22
TUBA4A-201ENST00000248437 RBMY1FQ15415 496 aaKnown RBP13.67□□□□□ -0.22
TUBA4A-201ENST00000248437 CLUHP3Q96NS8 147 aa13.67□□□□□ -0.22
TUBA4A-201ENST00000248437 ZMAT4Q9H898 229 aa13.67□□□□□ -0.22
TUBA4A-201ENST00000248437 BATFQ16520 125 aa13.66□□□□□ -0.22
TUBA4A-201ENST00000248437 SUMO4Q6EEV6 95 aa13.66□□□□□ -0.22
TUBA4A-201ENST00000248437 DKK2Q9UBU2 259 aa13.66□□□□□ -0.22
TUBA4A-201ENST00000248437 CBY3A6NI87 242 aa13.66□□□□□ -0.22
TUBA4A-201ENST00000248437 NDUFA7O95182 113 aa13.66□□□□□ -0.22
TUBA4A-201ENST00000248437 FOSL1P15407 271 aa13.66□□□□□ -0.22
TUBA4A-201ENST00000248437 ZNF124Q15973 351 aa13.66□□□□□ -0.22
TUBA4A-201ENST00000248437 A0A087WWL8 130 aa13.65□□□□□ -0.22
TUBA4A-201ENST00000248437 COL5A1-AS1Q5SY13 56 aa13.65□□□□□ -0.22
TUBA4A-201ENST00000248437 TOMM6Q96B49 74 aa13.65□□□□□ -0.22
TUBA4A-201ENST00000248437 CSTL1Q9H114 145 aa13.65□□□□□ -0.22
TUBA4A-201ENST00000248437 CRYGDP07320 174 aa13.64□□□□□ -0.23
TUBA4A-201ENST00000248437 ANKRD39Q53RE8 183 aa13.64□□□□□ -0.23
TUBA4A-201ENST00000248437 TRBV6-5A0A0K0K1A5 114 aa13.64□□□□□ -0.23
TUBA4A-201ENST00000248437 F5H697 171 aa13.64□□□□□ -0.23
TUBA4A-201ENST00000248437 JMJD8Q96S16 334 aa13.64□□□□□ -0.23
TUBA4A-201ENST00000248437 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.63□□□□□ -0.23
TUBA4A-201ENST00000248437 POLR2KP53803 58 aaKnown RBP13.63□□□□□ -0.23
TUBA4A-201ENST00000248437 ZNF876PQ49A33 203 aa13.63□□□□□ -0.23
TUBA4A-201ENST00000248437 LINC00467Q9BRT7 94 aa13.63□□□□□ -0.23
TUBA4A-201ENST00000248437 G0S2P27469 103 aa13.62□□□□□ -0.23
TUBA4A-201ENST00000248437 ODF3L2Q3SX64 289 aa13.62□□□□□ -0.23
TUBA4A-201ENST00000248437 STPG4Q8N801 248 aa13.62□□□□□ -0.23
TUBA4A-201ENST00000248437 TP73-AS1Q9UF72 201 aa13.62□□□□□ -0.23
TUBA4A-201ENST00000248437 FAM74A4Q5TZK3 123 aa13.62□□□□□ -0.23
TUBA4A-201ENST00000248437 LINC01549A6NIU2 74 aa13.61□□□□□ -0.23
TUBA4A-201ENST00000248437 VCYO14598 125 aa13.61□□□□□ -0.23
TUBA4A-201ENST00000248437 IGKCP01834 107 aa13.61□□□□□ -0.23
TUBA4A-201ENST00000248437 TRAV12-1A0A0B4J245 112 aa13.61□□□□□ -0.23
TUBA4A-201ENST00000248437 DPM2O94777 84 aa13.61□□□□□ -0.23
TUBA4A-201ENST00000248437 HINT1P49773 126 aaPredicted RBP13.61□□□□□ -0.23
TUBA4A-201ENST00000248437 ZNF56Q15929 161 aa13.61□□□□□ -0.23
TUBA4A-201ENST00000248437 PIK3CD-AS1Q5SR53 167 aa13.61□□□□□ -0.23
TUBA4A-201ENST00000248437 C2orf66Q6UXQ4 117 aa13.61□□□□□ -0.23
TUBA4A-201ENST00000248437 A0A087WX48 190 aa13.6□□□□□ -0.23
TUBA4A-201ENST00000248437 M0QY20 66 aa13.6□□□□□ -0.23
TUBA4A-201ENST00000248437 FGF6P10767 208 aa13.6□□□□□ -0.23
TUBA4A-201ENST00000248437 PROK1P58294 105 aa13.6□□□□□ -0.23
TUBA4A-201ENST00000248437 SCGB3A1Q96QR1 104 aa13.6□□□□□ -0.23
TUBA4A-201ENST00000248437 HHLA3Q9XRX5 114 aa13.6□□□□□ -0.23
TUBA4A-201ENST00000248437 WNK1Q9H4A3 2382 aa13.6□□□□□ -0.23
TUBA4A-201ENST00000248437 TRBV27A0A0K0K1C4 114 aa13.59□□□□□ -0.23
TUBA4A-201ENST00000248437 INSP01308 110 aa13.59□□□□□ -0.23
TUBA4A-201ENST00000248437 BOD1L2Q8IYS8 172 aa13.59□□□□□ -0.23
TUBA4A-201ENST00000248437 PTH2Q96A98 100 aa13.59□□□□□ -0.23
TUBA4A-201ENST00000248437 DLEU1O43261 78 aa13.59□□□□□ -0.23
TUBA4A-201ENST00000248437 ZNF415Q09FC8 603 aa13.59□□□□□ -0.23
TUBA4A-201ENST00000248437 KIR2DL4Q99706 377 aa13.59□□□□□ -0.23
TUBA4A-201ENST00000248437 SDHAF1A6NFY7 115 aa13.58□□□□□ -0.24
TUBA4A-201ENST00000248437 TRPT1Q86TN4 253 aaKnown RBP13.58□□□□□ -0.24
TUBA4A-201ENST00000248437 ZMAT5Q9UDW3 170 aaKnown RBP13.58□□□□□ -0.24
TUBA4A-201ENST00000248437 OR11H12B2RN74 326 aa13.58□□□□□ -0.24
TUBA4A-201ENST00000248437 CMC4P56277 68 aaPredicted RBP13.58□□□□□ -0.24
TUBA4A-201ENST00000248437 C12orf54Q6X4T0 127 aa13.58□□□□□ -0.24
TUBA4A-201ENST00000248437 C2orf91Q6ZV80 131 aa13.58□□□□□ -0.24
TUBA4A-201ENST00000248437 ERASQ7Z444 233 aa13.58□□□□□ -0.24
TUBA4A-201ENST00000248437 EDA2RQ9HAV5 297 aa13.58□□□□□ -0.24
TUBA4A-201ENST00000248437 MRPL35Q9NZE8 188 aaKnown RBP13.58□□□□□ -0.24
TUBA4A-201ENST00000248437 C2CD3Q4AC94 2353 aa13.58□□□□□ -0.24
TUBA4A-201ENST00000248437 M0R2P5 195 aa13.57□□□□□ -0.24
TUBA4A-201ENST00000248437 CRLF1O75462 422 aa13.57□□□□□ -0.24
TUBA4A-201ENST00000248437 HTN1P15515 57 aa13.57□□□□□ -0.24
TUBA4A-201ENST00000248437 STHQ8IWL8 128 aa13.57□□□□□ -0.24
TUBA4A-201ENST00000248437 ADARB2-AS1A8MUL3 147 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms