RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 XCL1P47992 114 aa15.28■□□□□ 0.04
SOX4-201ENST00000244745 PSCAO43653 123 aa15.27■□□□□ 0.03
SOX4-201ENST00000244745 CLEC2BQ92478 149 aa15.27■□□□□ 0.03
SOX4-201ENST00000244745 DEFB121Q5J5C9 76 aa15.27■□□□□ 0.03
SOX4-201ENST00000244745 A0A1B0GX51 115 aa15.26■□□□□ 0.03
SOX4-201ENST00000244745 ATOX1O00244 68 aa15.26■□□□□ 0.03
SOX4-201ENST00000244745 SLC25A29Q8N8R3 303 aa15.26■□□□□ 0.03
SOX4-201ENST00000244745 ANGP03950 147 aaKnown RBP15.26■□□□□ 0.03
SOX4-201ENST00000244745 Q6ZUT4 128 aa15.26■□□□□ 0.03
SOX4-201ENST00000244745 Q8N1Y9 231 aa15.26■□□□□ 0.03
SOX4-201ENST00000244745 IGHV4-30-2A0A087WSY4 118 aa15.25■□□□□ 0.03
SOX4-201ENST00000244745 TCL1BO95988 128 aa15.25■□□□□ 0.03
SOX4-201ENST00000244745 MT-ATP8P03928 68 aa15.25■□□□□ 0.03
SOX4-201ENST00000244745 DAND5Q8N907 189 aa15.25■□□□□ 0.03
SOX4-201ENST00000244745 HERV-K104P63124 156 aa15.25■□□□□ 0.03
SOX4-201ENST00000244745 IGF2-ASQ6U949 168 aa15.25■□□□□ 0.03
SOX4-201ENST00000244745 C11orf86A6NJI1 115 aa15.24■□□□□ 0.03
SOX4-201ENST00000244745 SPANXB1Q9NS25 103 aaPredicted RBP15.24■□□□□ 0.03
SOX4-201ENST00000244745 USF3Q68DE3 2245 aa15.24■□□□□ 0.03
SOX4-201ENST00000244745 ADORA2A-AS1P86434 159 aa15.24■□□□□ 0.03
SOX4-201ENST00000244745 ZNF80P51504 273 aaPredicted RBP15.24■□□□□ 0.03
SOX4-201ENST00000244745 TMEM258P61165 79 aa15.24■□□□□ 0.03
SOX4-201ENST00000244745 NDUFA11Q86Y39 141 aa15.23■□□□□ 0.03
SOX4-201ENST00000244745 NKAPP1Q8N9T2 125 aa15.23■□□□□ 0.03
SOX4-201ENST00000244745 FANCD2OSQ96PS1 177 aa15.23■□□□□ 0.03
SOX4-201ENST00000244745 LGALS9O00182 355 aa15.23■□□□□ 0.03
SOX4-201ENST00000244745 NBL1P41271 181 aa15.23■□□□□ 0.03
SOX4-201ENST00000244745 MRPL23Q16540 153 aaKnown RBP15.23■□□□□ 0.03
SOX4-201ENST00000244745 Q6ZQT7 251 aa15.23■□□□□ 0.03
SOX4-201ENST00000244745 PIFOQ8TCI5 191 aa15.22■□□□□ 0.03
SOX4-201ENST00000244745 INTS1Q8N201 2190 aaKnown RBP15.22■□□□□ 0.03
SOX4-201ENST00000244745 A0A0J9YY99 117 aa15.22■□□□□ 0.03
SOX4-201ENST00000244745 K7EQD1 137 aa15.22■□□□□ 0.03
SOX4-201ENST00000244745 IGHV4OR15-8A0A075B7B6 117 aa15.21■□□□□ 0.03
SOX4-201ENST00000244745 A0A087WW49 117 aa15.21■□□□□ 0.03
SOX4-201ENST00000244745 APOC4P55056 127 aa15.21■□□□□ 0.03
SOX4-201ENST00000244745 TRBV12-3P01733 135 aa15.21■□□□□ 0.02
SOX4-201ENST00000244745 CGB3P0DN86 165 aa15.21■□□□□ 0.02
SOX4-201ENST00000244745 CGB7P0DN87 165 aa15.21■□□□□ 0.02
SOX4-201ENST00000244745 MUC22E2RYF6 1773 aaPredicted RBP15.21■□□□□ 0.02
SOX4-201ENST00000244745 C5orf38Q86SI9 138 aa15.2■□□□□ 0.02
SOX4-201ENST00000244745 CCL24O00175 119 aa15.2■□□□□ 0.02
SOX4-201ENST00000244745 GTF3C1Q12789 2109 aa15.2■□□□□ 0.02
SOX4-201ENST00000244745 PRB1P04280 392 aa15.2■□□□□ 0.02
SOX4-201ENST00000244745 GPR179Q6PRD1 2367 aa15.2■□□□□ 0.02
SOX4-201ENST00000244745 MED13Q9UHV7 2174 aa15.19■□□□□ 0.02
SOX4-201ENST00000244745 PCNX3Q9H6A9 2034 aa15.19■□□□□ 0.02
SOX4-201ENST00000244745 UNQ9165/PRO28630Q6UXU0 137 aa15.19■□□□□ 0.02
SOX4-201ENST00000244745 MED14OSP0DP75 135 aa15.19■□□□□ 0.02
SOX4-201ENST00000244745 C1orf43Q9BWL3 253 aa15.19■□□□□ 0.02
SOX4-201ENST00000244745 Q71RC1 249 aaPredicted RBP15.18■□□□□ 0.02
SOX4-201ENST00000244745 IGHG2P01859 326 aa15.18■□□□□ 0.02
SOX4-201ENST00000244745 LINC00574Q9H8X3 128 aa15.18■□□□□ 0.02
SOX4-201ENST00000244745 COL6A6A6NMZ7 2263 aa15.18■□□□□ 0.02
SOX4-201ENST00000244745 TIMM17AQ99595 171 aa15.18■□□□□ 0.02
SOX4-201ENST00000244745 SIRPDQ9H106 197 aa15.18■□□□□ 0.02
SOX4-201ENST00000244745 SPTBN1Q01082 2364 aaKnown RBP15.18■□□□□ 0.02
SOX4-201ENST00000244745 H3BT86 120 aa15.17■□□□□ 0.02
SOX4-201ENST00000244745 SND1-IT1Q9HBX3 110 aa15.17■□□□□ 0.02
SOX4-201ENST00000244745 TNRC6BQ9UPQ9 1833 aaKnown RBP15.17■□□□□ 0.02
SOX4-201ENST00000244745 NDUFV3P56181 108 aaKnown RBP15.17■□□□□ 0.02
SOX4-201ENST00000244745 MLST8Q9BVC4 326 aa15.17■□□□□ 0.02
SOX4-201ENST00000244745 OPRPNQ99935 248 aaPredicted RBP15.17■□□□□ 0.02
SOX4-201ENST00000244745 CADP27708 2225 aa15.17■□□□□ 0.02
SOX4-201ENST00000244745 MBD6Q96DN6 1003 aa15.16■□□□□ 0.02
SOX4-201ENST00000244745 MALRD1Q5VYJ5 2156 aa15.16■□□□□ 0.02
SOX4-201ENST00000244745 PCDH15Q96QU1 1955 aa15.15■□□□□ 0.02
SOX4-201ENST00000244745 TRAV4A0A0B4J268 109 aa15.15■□□□□ 0.02
SOX4-201ENST00000244745 NCOA6Q14686 2063 aaPredicted RBP15.15■□□□□ 0.02
SOX4-201ENST00000244745 MDFICQ9P1T7 246 aa15.15■□□□□ 0.02
SOX4-201ENST00000244745 SPTBN2O15020 2390 aa15.15■□□□□ 0.02
SOX4-201ENST00000244745 C10orf105Q8TEF2 133 aa15.15■□□□□ 0.02
SOX4-201ENST00000244745 CCDC140Q96MF4 163 aa15.15■□□□□ 0.02
SOX4-201ENST00000244745 H0YGX0 51 aa15.14■□□□□ 0.01
SOX4-201ENST00000244745 RNF152Q8N8N0 203 aa15.14■□□□□ 0.01
SOX4-201ENST00000244745 C16orf74Q96GX8 76 aa15.14■□□□□ 0.01
SOX4-201ENST00000244745 PSMB8P28062 276 aa15.14■□□□□ 0.01
SOX4-201ENST00000244745 DAZ2Q13117 558 aaKnown RBP15.14■□□□□ 0.01
SOX4-201ENST00000244745 DAZ4Q86SG3 579 aaKnown RBP15.14■□□□□ 0.01
SOX4-201ENST00000244745 DAZ3Q9NR90 486 aaKnown RBP15.14■□□□□ 0.01
SOX4-201ENST00000244745 CRYGBP07316 175 aa15.13■□□□□ 0.01
SOX4-201ENST00000244745 COX7B2Q8TF08 81 aa15.13■□□□□ 0.01
SOX4-201ENST00000244745 NRGNQ92686 78 aa15.13■□□□□ 0.01
SOX4-201ENST00000244745 DYSFO75923 2080 aa15.13■□□□□ 0.01
SOX4-201ENST00000244745 ACACAQ13085 2346 aa15.12■□□□□ 0.01
SOX4-201ENST00000244745 K7EMT4 169 aa15.12■□□□□ 0.01
SOX4-201ENST00000244745 TM2D2Q9BX73 214 aa15.12■□□□□ 0.01
SOX4-201ENST00000244745 ARFGEF3Q5TH69 2177 aa15.12■□□□□ 0.01
SOX4-201ENST00000244745 NFE4Q86UQ8 179 aa15.12■□□□□ 0.01
SOX4-201ENST00000244745 TMEM61Q8N0U2 210 aa15.12■□□□□ 0.01
SOX4-201ENST00000244745 hADV29S1A0JD25 119 aa15.12■□□□□ 0.01
SOX4-201ENST00000244745 C22orf34Q6ZV56 151 aa15.11■□□□□ 0.01
SOX4-201ENST00000244745 WNK2Q9Y3S1 2297 aa15.11■□□□□ 0.01
SOX4-201ENST00000244745 LINC01548A6NM66 108 aa15.11■□□□□ 0.01
SOX4-201ENST00000244745 IGLC6P0CF74 106 aa15.11■□□□□ 0.01
SOX4-201ENST00000244745 GYPEP15421 78 aa15.11■□□□□ 0.01
SOX4-201ENST00000244745 ODF3BA8MYP8 253 aa15.1■□□□□ 0.01
SOX4-201ENST00000244745 FREM1Q5H8C1 2179 aa15.1■□□□□ 0.01
SOX4-201ENST00000244745 IGLV10-54A0A075B6I4 117 aa15.1■□□□□ 0.01
SOX4-201ENST00000244745 IGHV4-4A0A075B6R2 117 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms