RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 CD7P09564 240 aa12.14□□□□□ -0.47
LTBR-201ENST00000228918 PRO0461Q9UI25 63 aa12.14□□□□□ -0.47
LTBR-201ENST00000228918 TP53TG1Q9Y2A0 90 aa12.14□□□□□ -0.47
LTBR-201ENST00000228918 SPG11Q96JI7 2443 aa12.14□□□□□ -0.47
LTBR-201ENST00000228918 B4DSR2 109 aa12.14□□□□□ -0.47
LTBR-201ENST00000228918 H3BMG7 143 aa12.14□□□□□ -0.47
LTBR-201ENST00000228918 SCGB2A2Q13296 93 aa12.14□□□□□ -0.47
LTBR-201ENST00000228918 Q5PR19 223 aa12.14□□□□□ -0.47
LTBR-201ENST00000228918 ZFP2Q6ZN57 461 aa12.14□□□□□ -0.47
LTBR-201ENST00000228918 A0A087WWL8 130 aa12.13□□□□□ -0.47
LTBR-201ENST00000228918 IGIPA6NJ69 53 aa12.13□□□□□ -0.47
LTBR-201ENST00000228918 ODF3Q96PU9 254 aa12.13□□□□□ -0.47
LTBR-201ENST00000228918 PKD1L2Q7Z442 2459 aa12.13□□□□□ -0.47
LTBR-201ENST00000228918 IGLV4-69A0A075B6H9 119 aa12.13□□□□□ -0.47
LTBR-201ENST00000228918 LINC01549A6NIU2 74 aa12.13□□□□□ -0.47
LTBR-201ENST00000228918 COX6B1P14854 86 aa12.13□□□□□ -0.47
LTBR-201ENST00000228918 ZNF688P0C7X2 276 aa12.12□□□□□ -0.47
LTBR-201ENST00000228918 RRN3P1Q2M238 152 aa12.12□□□□□ -0.47
LTBR-201ENST00000228918 C9orf85Q96MD7 179 aa12.12□□□□□ -0.47
LTBR-201ENST00000228918 ZNF815PA8K554 130 aa12.12□□□□□ -0.47
LTBR-201ENST00000228918 LGALS9O00182 355 aa12.12□□□□□ -0.47
LTBR-201ENST00000228918 VCYO14598 125 aa12.12□□□□□ -0.47
LTBR-201ENST00000228918 IGHV4-59P01825 116 aa12.12□□□□□ -0.47
LTBR-201ENST00000228918 GAGE13Q4V321 117 aa12.12□□□□□ -0.47
LTBR-201ENST00000228918 C10orf99Q6UWK7 81 aa12.12□□□□□ -0.47
LTBR-201ENST00000228918 CSPG4Q6UVK1 2322 aa12.12□□□□□ -0.47
LTBR-201ENST00000228918 CELSR2Q9HCU4 2923 aa12.11□□□□□ -0.47
LTBR-201ENST00000228918 IGHV3-16A0A0C4DH30 117 aa12.11□□□□□ -0.47
LTBR-201ENST00000228918 C11orf86A6NJI1 115 aa12.11□□□□□ -0.47
LTBR-201ENST00000228918 KIR2DL4Q99706 377 aa12.11□□□□□ -0.47
LTBR-201ENST00000228918 A0A0J9YX75 114 aa12.11□□□□□ -0.47
LTBR-201ENST00000228918 SDHAF1A6NFY7 115 aa12.11□□□□□ -0.47
LTBR-201ENST00000228918 F5H697 171 aa12.11□□□□□ -0.47
LTBR-201ENST00000228918 GATA3P23771 443 aa12.11□□□□□ -0.47
LTBR-201ENST00000228918 RPL39P62891 51 aaKnown RBP12.11□□□□□ -0.47
LTBR-201ENST00000228918 MAP1AP78559 2803 aaPredicted RBP12.1□□□□□ -0.47
LTBR-201ENST00000228918 TRAV26-1A0A087WT03 109 aa12.1□□□□□ -0.47
LTBR-201ENST00000228918 TRBV6-5A0A0K0K1A5 114 aa12.1□□□□□ -0.47
LTBR-201ENST00000228918 TRBV27A0A0K0K1C4 114 aa12.1□□□□□ -0.47
LTBR-201ENST00000228918 INSL3P51460 131 aa12.1□□□□□ -0.47
LTBR-201ENST00000228918 PMVKQ15126 192 aa12.1□□□□□ -0.47
LTBR-201ENST00000228918 DEFB112Q30KQ8 113 aa12.1□□□□□ -0.47
LTBR-201ENST00000228918 PAPPA-AS1Q5QFB9 102 aa12.1□□□□□ -0.47
LTBR-201ENST00000228918 DEFB104AQ8WTQ1 72 aa12.1□□□□□ -0.47
LTBR-201ENST00000228918 PLEKHB2Q96CS7 222 aa12.1□□□□□ -0.47
LTBR-201ENST00000228918 TMEM141Q96I45 108 aa12.1□□□□□ -0.47
LTBR-201ENST00000228918 TIMM17AQ99595 171 aa12.1□□□□□ -0.47
LTBR-201ENST00000228918 CFAP46Q8IYW2 2715 aa12.1□□□□□ -0.47
LTBR-201ENST00000228918 DOPEY1Q5JWR5 2465 aa12.1□□□□□ -0.47
LTBR-201ENST00000228918 AMTNQ6UX39 209 aa12.09□□□□□ -0.47
LTBR-201ENST00000228918 TRAV12-2A0A075B6T6 113 aa12.09□□□□□ -0.47
LTBR-201ENST00000228918 TMEM89A2RUT3 159 aa12.09□□□□□ -0.47
LTBR-201ENST00000228918 K7EQG2 157 aa12.09□□□□□ -0.47
LTBR-201ENST00000228918 MDFICQ9P1T7 246 aa12.09□□□□□ -0.47
LTBR-201ENST00000228918 CRYBA4P53673 196 aa12.08□□□□□ -0.48
LTBR-201ENST00000228918 SNRPD3P62318 126 aaKnown RBP12.08□□□□□ -0.48
LTBR-201ENST00000228918 FAM74A4Q5TZK3 123 aa12.08□□□□□ -0.48
LTBR-201ENST00000228918 MORN3Q6PF18 240 aaPredicted RBP12.08□□□□□ -0.48
LTBR-201ENST00000228918 SCGB1D4Q6XE38 83 aa12.08□□□□□ -0.48
LTBR-201ENST00000228918 IGKV3-20P01619 116 aa12.08□□□□□ -0.48
LTBR-201ENST00000228918 EMP1P54849 157 aa12.08□□□□□ -0.48
LTBR-201ENST00000228918 HERVK_113P61574 105 aa12.07□□□□□ -0.48
LTBR-201ENST00000228918 Q8N1Y9 231 aa12.07□□□□□ -0.48
LTBR-201ENST00000228918 SYT8Q8NBV8 401 aa12.07□□□□□ -0.48
LTBR-201ENST00000228918 KLHL30-AS1Q8NEE0 82 aa12.07□□□□□ -0.48
LTBR-201ENST00000228918 MRPL16Q9NX20 251 aaKnown RBP12.07□□□□□ -0.48
LTBR-201ENST00000228918 HOXA3O43365 443 aaPredicted RBP12.07□□□□□ -0.48
LTBR-201ENST00000228918 DSCR9P59020 149 aa12.07□□□□□ -0.48
LTBR-201ENST00000228918 IGHV1OR15-1A0A075B7D0 117 aa12.06□□□□□ -0.48
LTBR-201ENST00000228918 A6NJY4 79 aa12.06□□□□□ -0.48
LTBR-201ENST00000228918 M0QY20 66 aa12.06□□□□□ -0.48
LTBR-201ENST00000228918 ZNF56Q15929 161 aa12.06□□□□□ -0.48
LTBR-201ENST00000228918 NRGNQ92686 78 aa12.06□□□□□ -0.48
LTBR-201ENST00000228918 GEMIN7Q9H840 131 aaKnown RBP12.06□□□□□ -0.48
LTBR-201ENST00000228918 SPINK13Q1W4C9 94 aa12.06□□□□□ -0.48
LTBR-201ENST00000228918 MTURNQ8N3F0 131 aa12.06□□□□□ -0.48
LTBR-201ENST00000228918 FLNCQ14315 2725 aa12.05□□□□□ -0.48
LTBR-201ENST00000228918 USP9XQ93008 2570 aaPredicted RBP12.05□□□□□ -0.48
LTBR-201ENST00000228918 UBE2D1P51668 147 aa12.05□□□□□ -0.48
LTBR-201ENST00000228918 ZNF876PQ49A33 203 aa12.05□□□□□ -0.48
LTBR-201ENST00000228918 CDIP1Q9H305 208 aa12.05□□□□□ -0.48
LTBR-201ENST00000228918 ZNF256Q9Y2P7 627 aaPredicted RBP12.05□□□□□ -0.48
LTBR-201ENST00000228918 SYNJ2BPP57105 145 aa12.04□□□□□ -0.48
LTBR-201ENST00000228918 FOXI1Q12951 378 aa12.04□□□□□ -0.48
LTBR-201ENST00000228918 NSUN5P1Q3KNT7 163 aa12.04□□□□□ -0.48
LTBR-201ENST00000228918 LINC01356Q8N9X3 169 aa12.04□□□□□ -0.48
LTBR-201ENST00000228918 ATP6V0E2Q8NHE4 81 aa12.04□□□□□ -0.48
LTBR-201ENST00000228918 ZNRF2Q8NHG8 242 aa12.04□□□□□ -0.48
LTBR-201ENST00000228918 PGPEP1Q9NXJ5 209 aa12.04□□□□□ -0.48
LTBR-201ENST00000228918 ACACBO00763 2458 aa12.04□□□□□ -0.48
LTBR-201ENST00000228918 A0A0J9YY99 117 aa12.04□□□□□ -0.48
LTBR-201ENST00000228918 APOMO95445 188 aa12.04□□□□□ -0.48
LTBR-201ENST00000228918 TSPEAR-AS2P59090 65 aa12.04□□□□□ -0.48
LTBR-201ENST00000228918 SRSF9Q13242 221 aaKnown RBP eCLIP12.04□□□□□ -0.48
LTBR-201ENST00000228918 RHOHQ15669 191 aa12.04□□□□□ -0.48
LTBR-201ENST00000228918 CRYBG3Q68DQ2 2970 aa12.04□□□□□ -0.48
LTBR-201ENST00000228918 TRPT1Q86TN4 253 aaKnown RBP12.03□□□□□ -0.48
LTBR-201ENST00000228918 ZNF418Q8TF45 676 aaPredicted RBP12.03□□□□□ -0.48
LTBR-201ENST00000228918 C1QTNF4Q9BXJ3 329 aa12.03□□□□□ -0.48
LTBR-201ENST00000228918 TMEM170BQ5T4T1 132 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms