RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 MUC4Q99102 2169 aa12.2□□□□□ -0.46
TVP23C-201ENST00000225576 PRSS47A8MTI9 375 aa12.2□□□□□ -0.46
TVP23C-201ENST00000225576 M0R2P5 195 aa12.2□□□□□ -0.46
TVP23C-201ENST00000225576 PRM2P04554 102 aa12.2□□□□□ -0.46
TVP23C-201ENST00000225576 GATA1P15976 413 aaPredicted RBP12.2□□□□□ -0.46
TVP23C-201ENST00000225576 IFI27P40305 119 aaPredicted RBP12.2□□□□□ -0.46
TVP23C-201ENST00000225576 PYY3Q5JQD4 70 aa12.2□□□□□ -0.46
TVP23C-201ENST00000225576 FA2HQ7L5A8 372 aa12.2□□□□□ -0.46
TVP23C-201ENST00000225576 FAM19A2Q8N3H0 131 aa12.2□□□□□ -0.46
TVP23C-201ENST00000225576 NRACQ8N912 160 aa12.2□□□□□ -0.46
TVP23C-201ENST00000225576 CSNK1G2-AS1Q8NCQ2 148 aa12.2□□□□□ -0.46
TVP23C-201ENST00000225576 JPT2Q9H910 190 aa12.2□□□□□ -0.46
TVP23C-201ENST00000225576 AP5S1Q9NUS5 200 aa12.2□□□□□ -0.46
TVP23C-201ENST00000225576 TRAV26-2A0A0B4J265 109 aa12.19□□□□□ -0.46
TVP23C-201ENST00000225576 MGPP08493 103 aa12.19□□□□□ -0.46
TVP23C-201ENST00000225576 C12orf57Q99622 126 aa12.19□□□□□ -0.46
TVP23C-201ENST00000225576 IGHV3OR16-12A0A075B7B8 117 aa12.18□□□□□ -0.46
TVP23C-201ENST00000225576 LOC389332A0A1B0GUA5 103 aa12.18□□□□□ -0.46
TVP23C-201ENST00000225576 PPP1R17O96001 155 aa12.18□□□□□ -0.46
TVP23C-201ENST00000225576 CRYGDP07320 174 aa12.18□□□□□ -0.46
TVP23C-201ENST00000225576 JOSD1Q15040 202 aaPredicted RBP12.18□□□□□ -0.46
TVP23C-201ENST00000225576 Q6ZWC4 215 aa12.18□□□□□ -0.46
TVP23C-201ENST00000225576 CSTL1Q9H114 145 aa12.18□□□□□ -0.46
TVP23C-201ENST00000225576 NXT2Q9NPJ8 142 aaKnown RBP12.18□□□□□ -0.46
TVP23C-201ENST00000225576 LINC01546A6NGU7 62 aa12.17□□□□□ -0.46
TVP23C-201ENST00000225576 AZU1P20160 251 aa12.17□□□□□ -0.46
TVP23C-201ENST00000225576 A0A087WWL8 130 aa12.16□□□□□ -0.46
TVP23C-201ENST00000225576 ZNF705AQ6ZN79 300 aaPredicted RBP12.16□□□□□ -0.46
TVP23C-201ENST00000225576 RNASE8Q8TDE3 154 aaKnown RBP12.16□□□□□ -0.46
TVP23C-201ENST00000225576 TMEM263Q8WUH6 116 aaKnown RBP12.16□□□□□ -0.46
TVP23C-201ENST00000225576 RASL10AQ92737 203 aa12.16□□□□□ -0.46
TVP23C-201ENST00000225576 NDUFAF3Q9BU61 184 aa12.16□□□□□ -0.46
TVP23C-201ENST00000225576 IGHV1-24A0A0C4DH33 117 aa12.16□□□□□ -0.46
TVP23C-201ENST00000225576 IL17DQ8TAD2 202 aa12.16□□□□□ -0.46
TVP23C-201ENST00000225576 C20orf78Q9BR46 151 aa12.16□□□□□ -0.46
TVP23C-201ENST00000225576 A8MWV9 139 aa12.15□□□□□ -0.46
TVP23C-201ENST00000225576 Q8N8P6 123 aa12.15□□□□□ -0.46
TVP23C-201ENST00000225576 IGLV2-18A0A075B6J9 118 aa12.14□□□□□ -0.47
TVP23C-201ENST00000225576 PMCHL1Q16048 86 aa12.14□□□□□ -0.47
TVP23C-201ENST00000225576 FAM74A4Q5TZK3 123 aa12.14□□□□□ -0.47
TVP23C-201ENST00000225576 SUMO4Q6EEV6 95 aa12.14□□□□□ -0.47
TVP23C-201ENST00000225576 KIR2DL5BA0A0G2JN68 375 aa12.13□□□□□ -0.47
TVP23C-201ENST00000225576 KIR2DL5BA0A0G2JPC4 375 aa12.13□□□□□ -0.47
TVP23C-201ENST00000225576 F5H697 171 aa12.13□□□□□ -0.47
TVP23C-201ENST00000225576 SUMO2P61956 95 aaKnown RBP12.13□□□□□ -0.47
TVP23C-201ENST00000225576 KIR2DL5AQ8N109 375 aa12.13□□□□□ -0.47
TVP23C-201ENST00000225576 KIR2DL5BQ8NHK3 375 aa12.13□□□□□ -0.47
TVP23C-201ENST00000225576 C16orf74Q96GX8 76 aa12.13□□□□□ -0.47
TVP23C-201ENST00000225576 RPL39LQ96EH5 51 aaKnown RBP12.12□□□□□ -0.47
TVP23C-201ENST00000225576 NBEAL1Q6ZS30 2694 aa12.12□□□□□ -0.47
TVP23C-201ENST00000225576 LEPROTL1O95214 131 aa12.11□□□□□ -0.47
TVP23C-201ENST00000225576 RPL32P62910 135 aaKnown RBP12.11□□□□□ -0.47
TVP23C-201ENST00000225576 DAZ2Q13117 558 aaKnown RBP12.11□□□□□ -0.47
TVP23C-201ENST00000225576 ZNF56Q15929 161 aa12.11□□□□□ -0.47
TVP23C-201ENST00000225576 RRN3P1Q2M238 152 aa12.11□□□□□ -0.47
TVP23C-201ENST00000225576 UFSP1Q6NVU6 142 aa12.11□□□□□ -0.47
TVP23C-201ENST00000225576 SMIM2Q9BVW6 85 aa12.11□□□□□ -0.47
TVP23C-201ENST00000225576 EDA2RQ9HAV5 297 aa12.11□□□□□ -0.47
TVP23C-201ENST00000225576 M0QY20 66 aa12.11□□□□□ -0.47
TVP23C-201ENST00000225576 LGALS9BQ3B8N2 356 aa12.11□□□□□ -0.47
TVP23C-201ENST00000225576 OXLD1Q5BKU9 147 aa12.11□□□□□ -0.47
TVP23C-201ENST00000225576 NIT2Q9NQR4 276 aa12.11□□□□□ -0.47
TVP23C-201ENST00000225576 MRPL16Q9NX20 251 aaKnown RBP12.11□□□□□ -0.47
TVP23C-201ENST00000225576 TENM1Q9UKZ4 2725 aa12.1□□□□□ -0.47
TVP23C-201ENST00000225576 A0A096LNJ9 63 aa12.1□□□□□ -0.47
TVP23C-201ENST00000225576 TRBV6-5A0A0K0K1A5 114 aa12.1□□□□□ -0.47
TVP23C-201ENST00000225576 RHODO00212 210 aa12.1□□□□□ -0.47
TVP23C-201ENST00000225576 RS1O15537 224 aa12.1□□□□□ -0.47
TVP23C-201ENST00000225576 C3orf79P0CE67 100 aa12.1□□□□□ -0.47
TVP23C-201ENST00000225576 APOC4P55056 127 aa12.1□□□□□ -0.47
TVP23C-201ENST00000225576 KRTDAPP60985 99 aa12.1□□□□□ -0.47
TVP23C-201ENST00000225576 EGFEM1PQ0D2K5 195 aa12.1□□□□□ -0.47
TVP23C-201ENST00000225576 CFAP126Q5VTH2 177 aa12.1□□□□□ -0.47
TVP23C-201ENST00000225576 ZMAT5Q9UDW3 170 aaKnown RBP12.1□□□□□ -0.47
TVP23C-201ENST00000225576 HSPB8Q9UJY1 196 aa12.1□□□□□ -0.47
TVP23C-201ENST00000225576 PLAC8L1A1L4L8 177 aa12.09□□□□□ -0.47
TVP23C-201ENST00000225576 K7EMI3 77 aa12.09□□□□□ -0.47
TVP23C-201ENST00000225576 SCGB1D1O95968 90 aa12.09□□□□□ -0.47
TVP23C-201ENST00000225576 HBDP02042 147 aa12.09□□□□□ -0.47
TVP23C-201ENST00000225576 ST20Q9HBF5 79 aa12.09□□□□□ -0.47
TVP23C-201ENST00000225576 NOTCH3Q9UM47 2321 aa12.09□□□□□ -0.47
TVP23C-201ENST00000225576 H7C1H1 209 aa12.08□□□□□ -0.48
TVP23C-201ENST00000225576 FCER1GP30273 86 aa12.08□□□□□ -0.48
TVP23C-201ENST00000225576 ANK2Q01484 3957 aa12.08□□□□□ -0.48
TVP23C-201ENST00000225576 OVOL2Q9BRP0 275 aa12.08□□□□□ -0.48
TVP23C-201ENST00000225576 TRGV1A0A0A0MS02 117 aa12.07□□□□□ -0.48
TVP23C-201ENST00000225576 SMIM9A6NGZ8 99 aa12.07□□□□□ -0.48
TVP23C-201ENST00000225576 BTF3P20290 206 aaKnown RBP12.07□□□□□ -0.48
TVP23C-201ENST00000225576 POLR2KP53803 58 aaKnown RBP12.07□□□□□ -0.48
TVP23C-201ENST00000225576 LAGE3Q14657 143 aa12.07□□□□□ -0.48
TVP23C-201ENST00000225576 CDPF1Q6NVV7 123 aa12.07□□□□□ -0.48
TVP23C-201ENST00000225576 ZFP2Q6ZN57 461 aa12.07□□□□□ -0.48
TVP23C-201ENST00000225576 LINC00173Q6ZV60 143 aa12.06□□□□□ -0.48
TVP23C-201ENST00000225576 NOP10Q9NPE3 64 aaKnown RBP12.06□□□□□ -0.48
TVP23C-201ENST00000225576 IGHV4-30-4P0DP06 118 aa12.06□□□□□ -0.48
TVP23C-201ENST00000225576 KRTAP10-11P60412 298 aa12.06□□□□□ -0.48
TVP23C-201ENST00000225576 Q8N976 141 aa12.06□□□□□ -0.48
TVP23C-201ENST00000225576 TMEM70Q9BUB7 260 aa12.06□□□□□ -0.48
TVP23C-201ENST00000225576 VCYO14598 125 aa12.05□□□□□ -0.48
TVP23C-201ENST00000225576 TCAPO15273 167 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms