RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 ZNF462Q96JM2 2506 aa13.04□□□□□ -0.32
PTPN18-201ENST00000175756 MTORP42345 2549 aa13.04□□□□□ -0.32
PTPN18-201ENST00000175756 CLPSL1A2RUU4 121 aa13.04□□□□□ -0.32
PTPN18-201ENST00000175756 C11orf86A6NJI1 115 aa13.04□□□□□ -0.32
PTPN18-201ENST00000175756 SIRPDQ9H106 197 aa13.04□□□□□ -0.32
PTPN18-201ENST00000175756 C1orf122Q6ZSJ8 110 aa13.03□□□□□ -0.32
PTPN18-201ENST00000175756 SPANXB1Q9NS25 103 aaPredicted RBP13.03□□□□□ -0.32
PTPN18-201ENST00000175756 C9JAW5 83 aa13.03□□□□□ -0.32
PTPN18-201ENST00000175756 SNRPD3P62318 126 aaKnown RBP13.03□□□□□ -0.32
PTPN18-201ENST00000175756 TAL2Q16559 108 aa13.03□□□□□ -0.32
PTPN18-201ENST00000175756 C5orf56Q8N8D9 126 aa13.02□□□□□ -0.32
PTPN18-201ENST00000175756 PMVKQ15126 192 aa13.02□□□□□ -0.33
PTPN18-201ENST00000175756 FAM223BA6NKX1 122 aa13.01□□□□□ -0.33
PTPN18-201ENST00000175756 PAPPA-AS1Q5QFB9 102 aa13.01□□□□□ -0.33
PTPN18-201ENST00000175756 FAM223AQ8IWN6 122 aa13.01□□□□□ -0.33
PTPN18-201ENST00000175756 TOMM6Q96B49 74 aa13.01□□□□□ -0.33
PTPN18-201ENST00000175756 PIMREGQ9BSJ6 248 aa13.01□□□□□ -0.33
PTPN18-201ENST00000175756 DAZ1Q9NQZ3 744 aaKnown RBP13.01□□□□□ -0.33
PTPN18-201ENST00000175756 Q8N6K4 173 aa13□□□□□ -0.33
PTPN18-201ENST00000175756 IGHV4-38-2P0DP08 117 aa13□□□□□ -0.33
PTPN18-201ENST00000175756 MAPK1IP1LQ8NDC0 245 aa13□□□□□ -0.33
PTPN18-201ENST00000175756 CNFNQ9BYD5 112 aa13□□□□□ -0.33
PTPN18-201ENST00000175756 ERG28Q9UKR5 140 aa13□□□□□ -0.33
PTPN18-201ENST00000175756 JMJD1CQ15652 2540 aa12.99□□□□□ -0.33
PTPN18-201ENST00000175756 IGHV1-69DA0A0B4J2H0 117 aa12.99□□□□□ -0.33
PTPN18-201ENST00000175756 IGHV1-69P01742 117 aa12.99□□□□□ -0.33
PTPN18-201ENST00000175756 SUMO4Q6EEV6 95 aa12.99□□□□□ -0.33
PTPN18-201ENST00000175756 ZFAND2AQ8N6M9 145 aa12.99□□□□□ -0.33
PTPN18-201ENST00000175756 NDUFA4O00483 81 aa12.99□□□□□ -0.33
PTPN18-201ENST00000175756 A0A1W2PPR1 153 aa12.98□□□□□ -0.33
PTPN18-201ENST00000175756 J3QQQ9 107 aa12.98□□□□□ -0.33
PTPN18-201ENST00000175756 CD28P10747 220 aa12.98□□□□□ -0.33
PTPN18-201ENST00000175756 SYNJ2BPP57105 145 aa12.98□□□□□ -0.33
PTPN18-201ENST00000175756 AJUBAQ96IF1 538 aa12.98□□□□□ -0.33
PTPN18-201ENST00000175756 ATP6V0BQ99437 205 aa12.98□□□□□ -0.33
PTPN18-201ENST00000175756 CCL19Q99731 98 aa12.98□□□□□ -0.33
PTPN18-201ENST00000175756 ZMAT4Q9H898 229 aa12.98□□□□□ -0.33
PTPN18-201ENST00000175756 SRSF2Q01130 221 aaKnown RBP12.98□□□□□ -0.33
PTPN18-201ENST00000175756 NEXN-AS1Q8NBZ9 246 aa12.98□□□□□ -0.33
PTPN18-201ENST00000175756 IGLV2-18A0A075B6J9 118 aa12.97□□□□□ -0.33
PTPN18-201ENST00000175756 UCNP55089 124 aa12.97□□□□□ -0.33
PTPN18-201ENST00000175756 TNFRSF18Q9Y5U5 241 aa12.97□□□□□ -0.33
PTPN18-201ENST00000175756 EBI3Q14213 229 aa12.97□□□□□ -0.33
PTPN18-201ENST00000175756 ACANP16112 2415 aa12.96□□□□□ -0.33
PTPN18-201ENST00000175756 MRPL53Q96EL3 112 aaKnown RBP12.96□□□□□ -0.33
PTPN18-201ENST00000175756 GEMIN7Q9H840 131 aaKnown RBP12.96□□□□□ -0.33
PTPN18-201ENST00000175756 TRAV12-1A0A0B4J245 112 aa12.96□□□□□ -0.34
PTPN18-201ENST00000175756 EDN2P20800 178 aa12.96□□□□□ -0.34
PTPN18-201ENST00000175756 GNLYP22749 145 aa12.96□□□□□ -0.34
PTPN18-201ENST00000175756 MDFICQ9P1T7 246 aa12.96□□□□□ -0.34
PTPN18-201ENST00000175756 PRO1854Q9UHT4 67 aa12.95□□□□□ -0.34
PTPN18-201ENST00000175756 IGHV4-61A0A0C4DH41 118 aa12.95□□□□□ -0.34
PTPN18-201ENST00000175756 LMO4P61968 165 aa12.95□□□□□ -0.34
PTPN18-201ENST00000175756 TSPAN13O95857 204 aa12.95□□□□□ -0.34
PTPN18-201ENST00000175756 FOXI1Q12951 378 aa12.95□□□□□ -0.34
PTPN18-201ENST00000175756 PHLDA1Q8WV24 401 aaPredicted RBP12.95□□□□□ -0.34
PTPN18-201ENST00000175756 DUX3Q96PT4 197 aa12.95□□□□□ -0.34
PTPN18-201ENST00000175756 A0A0J9YXV3 536 aa12.94□□□□□ -0.34
PTPN18-201ENST00000175756 Q6ZS46 218 aa12.94□□□□□ -0.34
PTPN18-201ENST00000175756 USMG5Q96IX5 58 aa12.94□□□□□ -0.34
PTPN18-201ENST00000175756 A4D1N5 150 aa12.94□□□□□ -0.34
PTPN18-201ENST00000175756 ZNF625Q96I27 306 aaPredicted RBP12.94□□□□□ -0.34
PTPN18-201ENST00000175756 COX8CQ7Z4L0 72 aa12.94□□□□□ -0.34
PTPN18-201ENST00000175756 HIVEP2P31629 2446 aa12.93□□□□□ -0.34
PTPN18-201ENST00000175756 TRBV7-3A0A075B6L6 115 aa12.93□□□□□ -0.34
PTPN18-201ENST00000175756 ANAPC13Q9BS18 74 aa12.93□□□□□ -0.34
PTPN18-201ENST00000175756 LENEPQ9Y5L5 61 aa12.93□□□□□ -0.34
PTPN18-201ENST00000175756 SVEP1Q4LDE5 3571 aa12.93□□□□□ -0.34
PTPN18-201ENST00000175756 IGHV3-38A0A0C4DH36 116 aa12.93□□□□□ -0.34
PTPN18-201ENST00000175756 SNCGO76070 127 aa12.92□□□□□ -0.34
PTPN18-201ENST00000175756 FBXL19-AS1Q494R0 122 aa12.92□□□□□ -0.34
PTPN18-201ENST00000175756 C11orf71Q6IPW1 123 aa12.92□□□□□ -0.34
PTPN18-201ENST00000175756 C1QTNF4Q9BXJ3 329 aa12.92□□□□□ -0.34
PTPN18-201ENST00000175756 IGHV3-16A0A0C4DH30 117 aa12.92□□□□□ -0.34
PTPN18-201ENST00000175756 TRPT1Q86TN4 253 aaKnown RBP12.92□□□□□ -0.34
PTPN18-201ENST00000175756 IGKV3OR2-268A0A0C4DH90 116 aa12.92□□□□□ -0.34
PTPN18-201ENST00000175756 COX6CP09669 75 aa12.92□□□□□ -0.34
PTPN18-201ENST00000175756 PPDPFLQ8WWR9 84 aa12.92□□□□□ -0.34
PTPN18-201ENST00000175756 SPENQ96T58 3664 aaKnown RBP12.91□□□□□ -0.34
PTPN18-201ENST00000175756 RNASE3P12724 160 aaKnown RBP12.91□□□□□ -0.34
PTPN18-201ENST00000175756 CEMP1Q6PRD7 247 aaPredicted RBP12.91□□□□□ -0.34
PTPN18-201ENST00000175756 TEX29Q8N6K0 151 aa12.91□□□□□ -0.34
PTPN18-201ENST00000175756 TCL1BO95988 128 aa12.91□□□□□ -0.34
PTPN18-201ENST00000175756 TTC32Q5I0X7 151 aa12.91□□□□□ -0.34
PTPN18-201ENST00000175756 PIFOQ8TCI5 191 aa12.91□□□□□ -0.34
PTPN18-201ENST00000175756 FN1P02751 2386 aaKnown RBP12.91□□□□□ -0.34
PTPN18-201ENST00000175756 C11orf44Q8N8P7 122 aa12.91□□□□□ -0.34
PTPN18-201ENST00000175756 MT-ATP8P03928 68 aa12.9□□□□□ -0.34
PTPN18-201ENST00000175756 Q8N1Y9 231 aa12.9□□□□□ -0.34
PTPN18-201ENST00000175756 SLC25A20O43772 301 aa12.9□□□□□ -0.35
PTPN18-201ENST00000175756 MORN3Q6PF18 240 aaPredicted RBP12.9□□□□□ -0.35
PTPN18-201ENST00000175756 NDUFA11Q86Y39 141 aa12.9□□□□□ -0.35
PTPN18-201ENST00000175756 ITLN2Q8WWU7 325 aaPredicted RBP12.9□□□□□ -0.35
PTPN18-201ENST00000175756 DCHS2Q6V1P9 2916 aa12.89□□□□□ -0.35
PTPN18-201ENST00000175756 C10orf99Q6UWK7 81 aa12.89□□□□□ -0.35
PTPN18-201ENST00000175756 MUSTN1Q8IVN3 82 aa12.89□□□□□ -0.35
PTPN18-201ENST00000175756 P0DMU3 169 aa12.89□□□□□ -0.35
PTPN18-201ENST00000175756 FAM231AP0DMU4 169 aa12.89□□□□□ -0.35
PTPN18-201ENST00000175756 FAM231CP0DMU5 169 aa12.89□□□□□ -0.35
PTPN18-201ENST00000175756 NBL1P41271 181 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms