RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 COX6A2Q02221 97 aa6.79□□□□□ -1.32
PTP4A1-207ENST00000639568 CHAC2Q8WUX2 184 aa6.79□□□□□ -1.32
PTP4A1-207ENST00000639568 PARLQ9H300 379 aa6.79□□□□□ -1.32
PTP4A1-207ENST00000639568 A8MWV9 139 aa6.78□□□□□ -1.32
PTP4A1-207ENST00000639568 ARL16Q0P5N6 197 aa6.78□□□□□ -1.32
PTP4A1-207ENST00000639568 C14orf178Q8N769 122 aaPredicted RBP6.78□□□□□ -1.32
PTP4A1-207ENST00000639568 OR10G7Q8NGN6 311 aa6.78□□□□□ -1.32
PTP4A1-207ENST00000639568 SMIM4Q8WVI0 70 aa6.78□□□□□ -1.32
PTP4A1-207ENST00000639568 PTH2Q96A98 100 aa6.78□□□□□ -1.32
PTP4A1-207ENST00000639568 A0A087WWL8 130 aa6.77□□□□□ -1.33
PTP4A1-207ENST00000639568 MUC21A0A0G2JKD1 596 aa6.77□□□□□ -1.33
PTP4A1-207ENST00000639568 F6UZH7 168 aa6.77□□□□□ -1.33
PTP4A1-207ENST00000639568 H3BS24 57 aa6.77□□□□□ -1.33
PTP4A1-207ENST00000639568 SCGB1D2O95969 90 aa6.77□□□□□ -1.33
PTP4A1-207ENST00000639568 RPL29P47914 159 aaKnown RBP6.77□□□□□ -1.33
PTP4A1-207ENST00000639568 TAS2R30P59541 319 aa6.77□□□□□ -1.33
PTP4A1-207ENST00000639568 NCS1P62166 190 aa6.77□□□□□ -1.33
PTP4A1-207ENST00000639568 RANP62826 216 aaKnown RBP6.77□□□□□ -1.33
PTP4A1-207ENST00000639568 LGALSLQ3ZCW2 172 aaPredicted RBP6.77□□□□□ -1.33
PTP4A1-207ENST00000639568 MPV17L2Q567V2 206 aa6.77□□□□□ -1.33
PTP4A1-207ENST00000639568 TMED6Q8WW62 240 aa6.77□□□□□ -1.33
PTP4A1-207ENST00000639568 ANKRD20A5PA0PJZ0 165 aa6.76□□□□□ -1.33
PTP4A1-207ENST00000639568 NDUFS6O75380 124 aaKnown RBP6.76□□□□□ -1.33
PTP4A1-207ENST00000639568 SFT2D2O95562 160 aa6.76□□□□□ -1.33
PTP4A1-207ENST00000639568 VBP1P61758 197 aa6.76□□□□□ -1.33
PTP4A1-207ENST00000639568 PKIAP61925 76 aa6.76□□□□□ -1.33
PTP4A1-207ENST00000639568 CLPSL2Q6UWE3 100 aa6.76□□□□□ -1.33
PTP4A1-207ENST00000639568 PRR26Q8N8Z3 221 aa6.76□□□□□ -1.33
PTP4A1-207ENST00000639568 PHYHIPLQ96FC7 376 aa6.76□□□□□ -1.33
PTP4A1-207ENST00000639568 C9orf85Q96MD7 179 aa6.76□□□□□ -1.33
PTP4A1-207ENST00000639568 SLC25A2Q9BXI2 301 aa6.76□□□□□ -1.33
PTP4A1-207ENST00000639568 NMES1Q9C002 83 aa6.76□□□□□ -1.33
PTP4A1-207ENST00000639568 TREM1Q9NP99 234 aa6.76□□□□□ -1.33
PTP4A1-207ENST00000639568 RGS5O15539 181 aa6.75□□□□□ -1.33
PTP4A1-207ENST00000639568 SLPIP03973 132 aa6.75□□□□□ -1.33
PTP4A1-207ENST00000639568 BAXQ07812 192 aa6.75□□□□□ -1.33
PTP4A1-207ENST00000639568 PPP1R1AQ13522 171 aa6.75□□□□□ -1.33
PTP4A1-207ENST00000639568 LINC00269Q8N2A0 174 aa6.75□□□□□ -1.33
PTP4A1-207ENST00000639568 HYLS1Q96M11 299 aa6.75□□□□□ -1.33
PTP4A1-207ENST00000639568 CHCHD5Q9BSY4 110 aa6.75□□□□□ -1.33
PTP4A1-207ENST00000639568 Q9H521 79 aa6.75□□□□□ -1.33
PTP4A1-207ENST00000639568 UQCC1Q9NVA1 299 aa6.75□□□□□ -1.33
PTP4A1-207ENST00000639568 TRBV6-8A0A0A6YYG3 113 aa6.74□□□□□ -1.33
PTP4A1-207ENST00000639568 S100A10P60903 97 aa6.74□□□□□ -1.33
PTP4A1-207ENST00000639568 RPL36AP83881 106 aaKnown RBP6.74□□□□□ -1.33
PTP4A1-207ENST00000639568 IL18Q14116 193 aa6.74□□□□□ -1.33
PTP4A1-207ENST00000639568 KRTAP26-1Q6PEX3 210 aa6.74□□□□□ -1.33
PTP4A1-207ENST00000639568 PRSS3P2Q8NHM4 247 aa6.74□□□□□ -1.33
PTP4A1-207ENST00000639568 RPL36ALQ969Q0 106 aaKnown RBP6.74□□□□□ -1.33
PTP4A1-207ENST00000639568 PRR34Q9NV39 138 aa6.74□□□□□ -1.33
PTP4A1-207ENST00000639568 LINC00474Q9P2X8 69 aa6.74□□□□□ -1.33
PTP4A1-207ENST00000639568 WDR83OSQ9Y284 106 aa6.74□□□□□ -1.33
PTP4A1-207ENST00000639568 IGLV10-54A0A075B6I4 117 aa6.73□□□□□ -1.33
PTP4A1-207ENST00000639568 L7N2F9 121 aa6.73□□□□□ -1.33
PTP4A1-207ENST00000639568 RHODO00212 210 aa6.73□□□□□ -1.33
PTP4A1-207ENST00000639568 H2AFB1P0C5Y9 115 aa6.73□□□□□ -1.33
PTP4A1-207ENST00000639568 H2AFB2P0C5Z0 115 aa6.73□□□□□ -1.33
PTP4A1-207ENST00000639568 RPS10P46783 165 aaKnown RBP6.73□□□□□ -1.33
PTP4A1-207ENST00000639568 VAMP2P63027 116 aa6.73□□□□□ -1.33
PTP4A1-207ENST00000639568 MIR17HGQ75NE6 70 aa6.73□□□□□ -1.33
PTP4A1-207ENST00000639568 MCFD2Q8NI22 146 aa6.73□□□□□ -1.33
PTP4A1-207ENST00000639568 CMTM2Q8TAZ6 248 aa6.73□□□□□ -1.33
PTP4A1-207ENST00000639568 FXYD5Q96DB9 178 aa6.73□□□□□ -1.33
PTP4A1-207ENST00000639568 FAM167A-AS1Q96KT0 104 aa6.73□□□□□ -1.33
PTP4A1-207ENST00000639568 VCX3AQ9NNX9 186 aa6.73□□□□□ -1.33
PTP4A1-207ENST00000639568 UBE2L5PA0A1B0GUS4 154 aa6.72□□□□□ -1.33
PTP4A1-207ENST00000639568 C7orf66A4D0T2 115 aa6.72□□□□□ -1.33
PTP4A1-207ENST00000639568 S100A4P26447 101 aaKnown RBP6.72□□□□□ -1.33
PTP4A1-207ENST00000639568 FAUP35544 74 aaKnown RBP6.72□□□□□ -1.33
PTP4A1-207ENST00000639568 BCAP31P51572 246 aa6.72□□□□□ -1.33
PTP4A1-207ENST00000639568 GCSAMLQ5JQS6 135 aa6.72□□□□□ -1.33
PTP4A1-207ENST00000639568 PIK3CD-AS1Q5SR53 167 aa6.72□□□□□ -1.33
PTP4A1-207ENST00000639568 FAM74A4Q5TZK3 123 aa6.72□□□□□ -1.33
PTP4A1-207ENST00000639568 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.72□□□□□ -1.33
PTP4A1-207ENST00000639568 BCL7BQ9BQE9 202 aa6.72□□□□□ -1.33
PTP4A1-207ENST00000639568 NDFIP1Q9BT67 221 aa6.72□□□□□ -1.33
PTP4A1-207ENST00000639568 JPT2Q9H910 190 aa6.72□□□□□ -1.33
PTP4A1-207ENST00000639568 GSKIPQ9P0R6 139 aa6.72□□□□□ -1.33
PTP4A1-207ENST00000639568 TRBV7-3A0A075B6L6 115 aa6.71□□□□□ -1.34
PTP4A1-207ENST00000639568 OR7C2O60412 319 aa6.71□□□□□ -1.34
PTP4A1-207ENST00000639568 CST7O76096 145 aa6.71□□□□□ -1.34
PTP4A1-207ENST00000639568 PTTG1O95997 202 aa6.71□□□□□ -1.34
PTP4A1-207ENST00000639568 RNASE3P12724 160 aaKnown RBP6.71□□□□□ -1.34
PTP4A1-207ENST00000639568 FGF7P21781 194 aa6.71□□□□□ -1.34
PTP4A1-207ENST00000639568 UFSP1Q6NVU6 142 aa6.71□□□□□ -1.34
PTP4A1-207ENST00000639568 SLIRPQ9GZT3 109 aaKnown RBP6.71□□□□□ -1.34
PTP4A1-207ENST00000639568 TRBV10-1A0A0K0K1A3 114 aa6.7□□□□□ -1.34
PTP4A1-207ENST00000639568 GZMBP10144 247 aa6.7□□□□□ -1.34
PTP4A1-207ENST00000639568 RAB5CP51148 216 aa6.7□□□□□ -1.34
PTP4A1-207ENST00000639568 UBE2D3P61077 147 aa6.7□□□□□ -1.34
PTP4A1-207ENST00000639568 UBE2D2P62837 147 aa6.7□□□□□ -1.34
PTP4A1-207ENST00000639568 IAH1Q2TAA2 248 aaPredicted RBP6.7□□□□□ -1.34
PTP4A1-207ENST00000639568 SPANXN2Q5MJ10 180 aa6.7□□□□□ -1.34
PTP4A1-207ENST00000639568 FAM74A1Q5RGS3 127 aa6.7□□□□□ -1.34
PTP4A1-207ENST00000639568 GOLT1AQ6ZVE7 132 aa6.7□□□□□ -1.34
PTP4A1-207ENST00000639568 INO80EQ8NBZ0 244 aaPredicted RBP6.7□□□□□ -1.34
PTP4A1-207ENST00000639568 TVP23CQ96ET8 276 aa6.7□□□□□ -1.34
PTP4A1-207ENST00000639568 DIRAS2Q96HU8 199 aa6.7□□□□□ -1.34
PTP4A1-207ENST00000639568 SLC25A21Q9BQT8 299 aaPredicted RBP6.7□□□□□ -1.34
PTP4A1-207ENST00000639568 LYRM2Q9NU23 88 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms