RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 SCO2A0A1W2PP80 73 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 FAM53AQ6NSI3 398 aaPredicted RBP3.31□□□□□ -1.88
SCN3A-209ENST00000639244 NANOS3P60323 173 aaKnown RBP3.31□□□□□ -1.88
SCN3A-209ENST00000639244 ORMDL3Q8N138 153 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 CLEC2BQ92478 149 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 Q9HAA7 133 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 BLCAPP62952 87 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 ARHGAP5-AS1Q96IT6 56 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 DKK2Q9UBU2 259 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 C19orf71A6NCJ1 209 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 ZNF815PA8K554 130 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 M0R135 149 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 M0R3E3 92 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 IGHV3-21A0A0B4J1V1 117 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 IGHV1OR15-9A0A0B4J2B8 117 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 A0A1B0GUT8 65 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 FP248Q71RG6 208 aaPredicted RBP3.31□□□□□ -1.88
SCN3A-209ENST00000639244 ZNF525Q8N782 197 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 A0A1W2PQD3 144 aa3.31□□□□□ -1.88
SCN3A-209ENST00000639244 EPM2AB3EWF7 344 aa3.3□□□□□ -1.88
SCN3A-209ENST00000639244 LINC00173Q6ZV60 143 aa3.3□□□□□ -1.88
SCN3A-209ENST00000639244 M0R378 163 aa3.3□□□□□ -1.88
SCN3A-209ENST00000639244 LINC01565O15544 149 aa3.3□□□□□ -1.88
SCN3A-209ENST00000639244 KLKP1Q107X0 134 aa3.3□□□□□ -1.88
SCN3A-209ENST00000639244 UBE2D1P51668 147 aa3.3□□□□□ -1.88
SCN3A-209ENST00000639244 DYNAPQ8N1N2 210 aa3.3□□□□□ -1.88
SCN3A-209ENST00000639244 JMJD1CQ15652 2540 aa3.3□□□□□ -1.88
SCN3A-209ENST00000639244 ZNF826PQ6ZT77 177 aa3.3□□□□□ -1.88
SCN3A-209ENST00000639244 THSD7AQ9UPZ6 1657 aa3.3□□□□□ -1.88
SCN3A-209ENST00000639244 FHL2Q14192 279 aa3.3□□□□□ -1.88
SCN3A-209ENST00000639244 CEMP1Q6PRD7 247 aaPredicted RBP3.3□□□□□ -1.88
SCN3A-209ENST00000639244 LINC01600Q96MT4 127 aa3.3□□□□□ -1.88
SCN3A-209ENST00000639244 TRAV13-2A0A0B4J235 113 aa3.3□□□□□ -1.88
SCN3A-209ENST00000639244 WNT9BO14905 357 aa3.3□□□□□ -1.88
SCN3A-209ENST00000639244 PRR25Q96S07 402 aa3.3□□□□□ -1.88
SCN3A-209ENST00000639244 SCXQ7RTU7 201 aa3.3□□□□□ -1.88
SCN3A-209ENST00000639244 DIRC1Q969H9 104 aa3.3□□□□□ -1.88
SCN3A-209ENST00000639244 OPRPNQ99935 248 aaPredicted RBP3.3□□□□□ -1.88
SCN3A-209ENST00000639244 CD59P13987 128 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 DEFB121Q5J5C9 76 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 TMEM30CPA0ZSE6 113 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 OVOL2Q9BRP0 275 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 RPP21Q9H633 154 aaKnown RBP3.29□□□□□ -1.88
SCN3A-209ENST00000639244 CCL17Q92583 94 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 R4GMQ9 66 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 PSPNO60542 156 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 CFC1BP0CG36 223 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 CFC1P0CG37 223 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 FGF12P61328 243 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 SDIM1Q6ZPB5 146 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 FAM223AQ8IWN6 122 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 PRB4P10163 310 aaPredicted RBP3.29□□□□□ -1.88
SCN3A-209ENST00000639244 Q6JHZ5 121 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 HS3ST6Q96QI5 342 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 SAA1P0DJI8 122 aaPredicted RBP3.29□□□□□ -1.88
SCN3A-209ENST00000639244 HMGA1P17096 107 aaKnown RBP3.29□□□□□ -1.88
SCN3A-209ENST00000639244 SPANXN1Q5VSR9 72 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 FAM19A3Q7Z5A8 133 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 SCGB3A1Q96QR1 104 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 UPK3BQ9BT76 320 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 SPRR3Q9UBC9 169 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 LOC101059948A0A1B0GTJ6 334 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 TLN2Q9Y4G6 2542 aa3.29□□□□□ -1.88
SCN3A-209ENST00000639244 GFRA3O60609 400 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 ZNF137PP52743 207 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 DEFB109BQ30KR1 87 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 ZNF706Q9Y5V0 76 aaPredicted RBP3.28□□□□□ -1.88
SCN3A-209ENST00000639244 IGHV1-69DA0A0B4J2H0 117 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 XCL1P47992 114 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 TMEM52Q8NDY8 209 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 XCL2Q9UBD3 114 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 MYO18BQ8IUG5 2567 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 TRBV7-1A0A0A6YYK4 115 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 IGHV5-51A0A0C4DH38 117 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 LINC00473A8K010 186 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 Q6ZS52 159 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 PHLDA3Q9Y5J5 127 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 IGLV3-10A0A075B6K4 115 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 RUSC1-AS1Q66K80 236 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 WFDC6Q9BQY6 131 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 C6orf223Q8N319 242 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 TRBV7-3A0A075B6L6 115 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 F8WEM9 126 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 H7BZZ5 65 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 UNQ9165/PRO28630Q6UXU0 137 aa3.28□□□□□ -1.88
SCN3A-209ENST00000639244 COL16A1Q07092 1604 aaPredicted RBP3.28□□□□□ -1.88
SCN3A-209ENST00000639244 TRAV7A0A075B6U4 112 aa3.28□□□□□ -1.89
SCN3A-209ENST00000639244 IGKV1D-13A0A0B4J2D9 117 aa3.28□□□□□ -1.89
SCN3A-209ENST00000639244 IGKV1-13P0DP09 117 aa3.28□□□□□ -1.89
SCN3A-209ENST00000639244 COX7A1P24310 79 aa3.28□□□□□ -1.89
SCN3A-209ENST00000639244 FAM30AQ9NZY2 134 aa3.28□□□□□ -1.89
SCN3A-209ENST00000639244 BCE1O60756 84 aa3.27□□□□□ -1.89
SCN3A-209ENST00000639244 ZNF22P17026 224 aaPredicted RBP3.27□□□□□ -1.89
SCN3A-209ENST00000639244 SOSTDC1Q6X4U4 206 aa3.27□□□□□ -1.89
SCN3A-209ENST00000639244 PHF5AQ7RTV0 110 aaKnown RBP3.27□□□□□ -1.89
SCN3A-209ENST00000639244 IGKV1D-8A0A087WSZ0 117 aa3.27□□□□□ -1.89
SCN3A-209ENST00000639244 A0A0C4DFX4 3053 aa3.27□□□□□ -1.89
SCN3A-209ENST00000639244 RNASE1P07998 156 aaKnown RBP3.27□□□□□ -1.89
SCN3A-209ENST00000639244 KISS1Q15726 138 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms