RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 MEF2BQ02080 365 aaPredicted RBP8.67□□□□□ -1.02
CLN6-225ENST00000638144 ESRGQ1W209 222 aa8.67□□□□□ -1.02
CLN6-225ENST00000638144 COX8CQ7Z4L0 72 aa8.67□□□□□ -1.02
CLN6-225ENST00000638144 C11orf52Q96A22 123 aa8.67□□□□□ -1.02
CLN6-225ENST00000638144 PRO0255Q9UI72 69 aa8.67□□□□□ -1.02
CLN6-225ENST00000638144 IFNA1P01562 189 aa8.66□□□□□ -1.02
CLN6-225ENST00000638144 CENPWQ5EE01 88 aa8.66□□□□□ -1.02
CLN6-225ENST00000638144 CFAP126Q5VTH2 177 aa8.66□□□□□ -1.02
CLN6-225ENST00000638144 ZNRF2Q8NHG8 242 aa8.66□□□□□ -1.02
CLN6-225ENST00000638144 JPT2Q9H910 190 aa8.66□□□□□ -1.02
CLN6-225ENST00000638144 ICOSQ9Y6W8 199 aa8.66□□□□□ -1.02
CLN6-225ENST00000638144 H3BNG1 76 aa8.65□□□□□ -1.02
CLN6-225ENST00000638144 S100A9P06702 114 aaKnown RBP8.65□□□□□ -1.02
CLN6-225ENST00000638144 ARMS2P0C7Q2 107 aa8.65□□□□□ -1.02
CLN6-225ENST00000638144 GYPEP15421 78 aa8.65□□□□□ -1.02
CLN6-225ENST00000638144 LINC01559Q495D7 138 aa8.65□□□□□ -1.02
CLN6-225ENST00000638144 ZNF575Q86XF7 245 aa8.65□□□□□ -1.02
CLN6-225ENST00000638144 PCNPQ8WW12 178 aaKnown RBP8.65□□□□□ -1.02
CLN6-225ENST00000638144 MLST8Q9BVC4 326 aa8.65□□□□□ -1.02
CLN6-225ENST00000638144 MED9Q9NWA0 146 aa8.65□□□□□ -1.02
CLN6-225ENST00000638144 RS1O15537 224 aa8.64□□□□□ -1.03
CLN6-225ENST00000638144 MGST1P10620 155 aaKnown RBP8.64□□□□□ -1.03
CLN6-225ENST00000638144 Q6ZR54 194 aa8.64□□□□□ -1.03
CLN6-225ENST00000638144 VAX2Q9UIW0 290 aa8.64□□□□□ -1.03
CLN6-225ENST00000638144 DNAH2Q9P225 4427 aa8.64□□□□□ -1.03
CLN6-225ENST00000638144 TRBV20OR9-2A0A075B6H5 130 aa8.63□□□□□ -1.03
CLN6-225ENST00000638144 MUC21A0A0G2JKD1 596 aa8.63□□□□□ -1.03
CLN6-225ENST00000638144 MUC21A0A140T8X8 626 aa8.63□□□□□ -1.03
CLN6-225ENST00000638144 K7EQD1 137 aa8.63□□□□□ -1.03
CLN6-225ENST00000638144 M0R381 172 aa8.63□□□□□ -1.03
CLN6-225ENST00000638144 IGLV2-8P01709 118 aa8.63□□□□□ -1.03
CLN6-225ENST00000638144 GATA1P15976 413 aaPredicted RBP8.63□□□□□ -1.03
CLN6-225ENST00000638144 BLOC1S1P78537 153 aa8.63□□□□□ -1.03
CLN6-225ENST00000638144 DMRTA1Q5VZB9 504 aa8.63□□□□□ -1.03
CLN6-225ENST00000638144 TXNDC17Q9BRA2 123 aa8.63□□□□□ -1.03
CLN6-225ENST00000638144 SAMD10Q9BYL1 202 aa8.63□□□□□ -1.03
CLN6-225ENST00000638144 IL36BQ9NZH7 164 aa8.63□□□□□ -1.03
CLN6-225ENST00000638144 HECTD4Q9Y4D8 3996 aa8.63□□□□□ -1.03
CLN6-225ENST00000638144 RTL8CO15255 209 aa8.62□□□□□ -1.03
CLN6-225ENST00000638144 PDE6DO43924 150 aa8.62□□□□□ -1.03
CLN6-225ENST00000638144 SRIP30626 198 aa8.62□□□□□ -1.03
CLN6-225ENST00000638144 GNG4P50150 75 aa8.62□□□□□ -1.03
CLN6-225ENST00000638144 FAM3BP58499 235 aaPredicted RBP8.62□□□□□ -1.03
CLN6-225ENST00000638144 SLAQ13239 276 aa8.62□□□□□ -1.03
CLN6-225ENST00000638144 Q6ZSN1 163 aa8.62□□□□□ -1.03
CLN6-225ENST00000638144 SLC25A29Q8N8R3 303 aa8.62□□□□□ -1.03
CLN6-225ENST00000638144 KRTAP1-5Q9BYS1 174 aa8.62□□□□□ -1.03
CLN6-225ENST00000638144 PARLQ9H300 379 aa8.62□□□□□ -1.03
CLN6-225ENST00000638144 MRPS16Q9Y3D3 137 aaKnown RBP8.62□□□□□ -1.03
CLN6-225ENST00000638144 PHLDA3Q9Y5J5 127 aa8.62□□□□□ -1.03
CLN6-225ENST00000638144 A0A087WWL8 130 aa8.61□□□□□ -1.03
CLN6-225ENST00000638144 NBDYA0A0U1RRE5 68 aa8.61□□□□□ -1.03
CLN6-225ENST00000638144 NXPH4O95158 308 aa8.61□□□□□ -1.03
CLN6-225ENST00000638144 GZMBP10144 247 aa8.61□□□□□ -1.03
CLN6-225ENST00000638144 CEBPGP53567 150 aa8.61□□□□□ -1.03
CLN6-225ENST00000638144 SSTP61278 116 aa8.61□□□□□ -1.03
CLN6-225ENST00000638144 MRPL23Q16540 153 aaKnown RBP8.61□□□□□ -1.03
CLN6-225ENST00000638144 TOR2AQ5JU69 321 aa8.61□□□□□ -1.03
CLN6-225ENST00000638144 DNLZQ5SXM8 178 aa8.61□□□□□ -1.03
CLN6-225ENST00000638144 FAM74A4Q5TZK3 123 aa8.61□□□□□ -1.03
CLN6-225ENST00000638144 OR10AG1Q8NH19 301 aa8.61□□□□□ -1.03
CLN6-225ENST00000638144 Q9H8V8 135 aa8.61□□□□□ -1.03
CLN6-225ENST00000638144 BIRC6Q9NR09 4857 aa8.6□□□□□ -1.03
CLN6-225ENST00000638144 DNAH17Q9UFH2 4485 aa8.6□□□□□ -1.03
CLN6-225ENST00000638144 RBFOX3A6NFN3 312 aa8.6□□□□□ -1.03
CLN6-225ENST00000638144 LYPD5Q6UWN5 251 aa8.6□□□□□ -1.03
CLN6-225ENST00000638144 NEGR1Q7Z3B1 354 aa8.6□□□□□ -1.03
CLN6-225ENST00000638144 SYT8Q8NBV8 401 aa8.6□□□□□ -1.03
CLN6-225ENST00000638144 PTH2Q96A98 100 aa8.6□□□□□ -1.03
CLN6-225ENST00000638144 SCRT2Q9NQ03 307 aa8.6□□□□□ -1.03
CLN6-225ENST00000638144 Q9UF83 564 aa8.6□□□□□ -1.03
CLN6-225ENST00000638144 FAT2Q9NYQ8 4349 aa8.59□□□□□ -1.03
CLN6-225ENST00000638144 A8MWV9 139 aa8.59□□□□□ -1.03
CLN6-225ENST00000638144 C14orf178Q8N769 122 aaPredicted RBP8.59□□□□□ -1.03
CLN6-225ENST00000638144 LYPD6BQ8NI32 183 aa8.59□□□□□ -1.03
CLN6-225ENST00000638144 UPK3BQ9BT76 320 aa8.59□□□□□ -1.03
CLN6-225ENST00000638144 TAGLN2P37802 199 aaKnown RBP8.58□□□□□ -1.04
CLN6-225ENST00000638144 RHOHQ15669 191 aa8.58□□□□□ -1.04
CLN6-225ENST00000638144 C1orf134Q5TEV5 83 aa8.58□□□□□ -1.04
CLN6-225ENST00000638144 UFSP1Q6NVU6 142 aa8.58□□□□□ -1.04
CLN6-225ENST00000638144 WFDC10BQ8IUB3 73 aa8.58□□□□□ -1.04
CLN6-225ENST00000638144 ZFP82Q8N141 532 aa8.58□□□□□ -1.04
CLN6-225ENST00000638144 OR2D3Q8NGH3 330 aa8.58□□□□□ -1.04
CLN6-225ENST00000638144 PRADC1Q9BSG0 188 aa8.58□□□□□ -1.04
CLN6-225ENST00000638144 TPPP3Q9BW30 176 aa8.58□□□□□ -1.04
CLN6-225ENST00000638144 TRBV6-4A0A1B0GX49 114 aa8.57□□□□□ -1.04
CLN6-225ENST00000638144 C19orf71A6NCJ1 209 aa8.57□□□□□ -1.04
CLN6-225ENST00000638144 GAGE12JA6NER3 117 aa8.57□□□□□ -1.04
CLN6-225ENST00000638144 K7EN84 100 aa8.57□□□□□ -1.04
CLN6-225ENST00000638144 GAGE1Q13065 139 aa8.57□□□□□ -1.04
CLN6-225ENST00000638144 GAGE4Q13068 117 aa8.57□□□□□ -1.04
CLN6-225ENST00000638144 GAGE5Q13069 117 aa8.57□□□□□ -1.04
CLN6-225ENST00000638144 GAGE13Q4V321 117 aa8.57□□□□□ -1.04
CLN6-225ENST00000638144 DAZAP1Q96EP5 407 aaKnown RBP8.57□□□□□ -1.04
CLN6-225ENST00000638144 SFRP2Q96HF1 295 aa8.57□□□□□ -1.04
CLN6-225ENST00000638144 EIF5A2Q9GZV4 153 aaKnown RBP8.57□□□□□ -1.04
CLN6-225ENST00000638144 PRSS29PA6NIE9 313 aa8.56□□□□□ -1.04
CLN6-225ENST00000638144 SIVA1O15304 175 aa8.56□□□□□ -1.04
CLN6-225ENST00000638144 SNAI2O43623 268 aa8.56□□□□□ -1.04
CLN6-225ENST00000638144 P01737 135 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms