RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 DEFB108BQ8NET1 73 aa9.2□□□□□ -0.94
CAPN3-221ENST00000638141 AMELXQ99217 191 aa9.2□□□□□ -0.94
CAPN3-221ENST00000638141 ACACAQ13085 2346 aa9.2□□□□□ -0.94
CAPN3-221ENST00000638141 PLXNB1O43157 2135 aa9.2□□□□□ -0.94
CAPN3-221ENST00000638141 C11orf86A6NJI1 115 aa9.2□□□□□ -0.94
CAPN3-221ENST00000638141 CD3EP07766 207 aa9.2□□□□□ -0.94
CAPN3-221ENST00000638141 ZNF56Q15929 161 aa9.2□□□□□ -0.94
CAPN3-221ENST00000638141 Q6ZS46 218 aa9.2□□□□□ -0.94
CAPN3-221ENST00000638141 EIF4EBP3O60516 100 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-221ENST00000638141 CCL3L1P16619 93 aa9.19□□□□□ -0.94
CAPN3-221ENST00000638141 ZNRF2Q8NHG8 242 aa9.19□□□□□ -0.94
CAPN3-221ENST00000638141 ARFGEF3Q5TH69 2177 aa9.19□□□□□ -0.94
CAPN3-221ENST00000638141 ANKRD11Q6UB99 2663 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-221ENST00000638141 IGLV4-69A0A075B6H9 119 aa9.19□□□□□ -0.94
CAPN3-221ENST00000638141 FAM236AA0A1B0GUQ0 79 aa9.19□□□□□ -0.94
CAPN3-221ENST00000638141 FAM236BA0A1B0GV22 79 aa9.19□□□□□ -0.94
CAPN3-221ENST00000638141 ENSAO43768 121 aaKnown RBP9.19□□□□□ -0.94
CAPN3-221ENST00000638141 DLX6P56179 175 aa9.19□□□□□ -0.94
CAPN3-221ENST00000638141 SUMO2P61956 95 aaKnown RBP9.19□□□□□ -0.94
CAPN3-221ENST00000638141 C2orf82Q6UX34 121 aa9.19□□□□□ -0.94
CAPN3-221ENST00000638141 C2orf66Q6UXQ4 117 aa9.19□□□□□ -0.94
CAPN3-221ENST00000638141 Q8TAT8 98 aa9.19□□□□□ -0.94
CAPN3-221ENST00000638141 DSPP15924 2871 aaKnown RBP9.19□□□□□ -0.94
CAPN3-221ENST00000638141 LOC107984640A0A0U1RRK4 108 aa9.18□□□□□ -0.94
CAPN3-221ENST00000638141 M0R381 172 aa9.18□□□□□ -0.94
CAPN3-221ENST00000638141 IGFBPL1Q8WX77 278 aa9.18□□□□□ -0.94
CAPN3-221ENST00000638141 MGAQ8IWI9 3026 aa9.18□□□□□ -0.94
CAPN3-221ENST00000638141 TPRP12270 2363 aaKnown RBP9.18□□□□□ -0.94
CAPN3-221ENST00000638141 IGHV7-4-1A0A0J9YVY3 117 aa9.17□□□□□ -0.94
CAPN3-221ENST00000638141 CRYGAP11844 174 aa9.17□□□□□ -0.94
CAPN3-221ENST00000638141 C9orf106Q8NAJ2 232 aa9.17□□□□□ -0.94
CAPN3-221ENST00000638141 IGKV3D-20A0A0C4DH25 116 aa9.17□□□□□ -0.94
CAPN3-221ENST00000638141 OOSP1A8MZH6 123 aa9.17□□□□□ -0.94
CAPN3-221ENST00000638141 CRYGDP07320 174 aa9.17□□□□□ -0.94
CAPN3-221ENST00000638141 PMVKQ15126 192 aa9.17□□□□□ -0.94
CAPN3-221ENST00000638141 UBTD1Q9HAC8 227 aa9.17□□□□□ -0.94
CAPN3-221ENST00000638141 TRGV11A0A075B6L2 103 aa9.16□□□□□ -0.94
CAPN3-221ENST00000638141 C3orf56Q8N813 242 aa9.16□□□□□ -0.94
CAPN3-221ENST00000638141 CFHR4Q92496 578 aa9.16□□□□□ -0.94
CAPN3-221ENST00000638141 TRAV26-2A0A0B4J265 109 aa9.16□□□□□ -0.94
CAPN3-221ENST00000638141 A0A0J9YX75 114 aa9.16□□□□□ -0.94
CAPN3-221ENST00000638141 H7C423 109 aa9.16□□□□□ -0.94
CAPN3-221ENST00000638141 NDUFB3O43676 98 aa9.16□□□□□ -0.94
CAPN3-221ENST00000638141 PPP1R17O96001 155 aa9.16□□□□□ -0.94
CAPN3-221ENST00000638141 CXCL5P42830 114 aa9.16□□□□□ -0.94
CAPN3-221ENST00000638141 METTL26Q96S19 204 aa9.16□□□□□ -0.94
CAPN3-221ENST00000638141 ACACBO00763 2458 aa9.15□□□□□ -0.94
CAPN3-221ENST00000638141 A0A0G2JNJ9 132 aa9.15□□□□□ -0.94
CAPN3-221ENST00000638141 C17orf100A8MU93 164 aa9.15□□□□□ -0.94
CAPN3-221ENST00000638141 M0R1B8 84 aa9.15□□□□□ -0.94
CAPN3-221ENST00000638141 COX7CP15954 63 aa9.15□□□□□ -0.94
CAPN3-221ENST00000638141 EMP1P54849 157 aa9.15□□□□□ -0.94
CAPN3-221ENST00000638141 MFAP4P55083 255 aa9.15□□□□□ -0.94
CAPN3-221ENST00000638141 TSPEAR-AS2P59090 65 aa9.15□□□□□ -0.94
CAPN3-221ENST00000638141 Q9UFV3 132 aa9.15□□□□□ -0.94
CAPN3-221ENST00000638141 URB1O60287 2271 aaKnown RBP9.15□□□□□ -0.94
CAPN3-221ENST00000638141 PF4P02776 101 aa9.15□□□□□ -0.95
CAPN3-221ENST00000638141 ELANEP08246 267 aa9.15□□□□□ -0.95
CAPN3-221ENST00000638141 IGHV1-8P0DP01 117 aa9.15□□□□□ -0.95
CAPN3-221ENST00000638141 SDIM1Q6ZPB5 146 aa9.15□□□□□ -0.95
CAPN3-221ENST00000638141 LINC00643Q86TS7 51 aa9.15□□□□□ -0.95
CAPN3-221ENST00000638141 TRAV17A0A0B4J275 112 aa9.14□□□□□ -0.95
CAPN3-221ENST00000638141 J3QQQ9 107 aa9.14□□□□□ -0.95
CAPN3-221ENST00000638141 TMEM141Q96I45 108 aa9.14□□□□□ -0.95
CAPN3-221ENST00000638141 KLK15Q9H2R5 256 aa9.14□□□□□ -0.95
CAPN3-221ENST00000638141 ATMQ13315 3056 aa9.14□□□□□ -0.95
CAPN3-221ENST00000638141 CACNA1GO43497 2377 aa9.14□□□□□ -0.95
CAPN3-221ENST00000638141 TRIAP1O43715 76 aa9.14□□□□□ -0.95
CAPN3-221ENST00000638141 PRB4P10163 310 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-221ENST00000638141 OXLD1Q5BKU9 147 aa9.14□□□□□ -0.95
CAPN3-221ENST00000638141 MRPL53Q96EL3 112 aaKnown RBP9.14□□□□□ -0.95
CAPN3-221ENST00000638141 EPG5Q9HCE0 2579 aa9.14□□□□□ -0.95
CAPN3-221ENST00000638141 IGHV1-3A0A0C4DH29 117 aa9.13□□□□□ -0.95
CAPN3-221ENST00000638141 SDHAF1A6NFY7 115 aa9.13□□□□□ -0.95
CAPN3-221ENST00000638141 RNF223E7ERA6 249 aa9.13□□□□□ -0.95
CAPN3-221ENST00000638141 IGHV4-39P01824 125 aa9.13□□□□□ -0.95
CAPN3-221ENST00000638141 NUP37Q8NFH4 326 aa9.13□□□□□ -0.95
CAPN3-221ENST00000638141 KAAG1Q9UBP8 84 aa9.13□□□□□ -0.95
CAPN3-221ENST00000638141 NBEAQ8NFP9 2946 aa9.13□□□□□ -0.95
CAPN3-221ENST00000638141 TMEM223A0PJW6 202 aa9.13□□□□□ -0.95
CAPN3-221ENST00000638141 APELAP0DMC3 54 aa9.13□□□□□ -0.95
CAPN3-221ENST00000638141 LGALS3P17931 250 aaKnown RBP9.13□□□□□ -0.95
CAPN3-221ENST00000638141 CNTFRP26992 372 aa9.13□□□□□ -0.95
CAPN3-221ENST00000638141 GFRALQ6UXV0 394 aa9.13□□□□□ -0.95
CAPN3-221ENST00000638141 RNF152Q8N8N0 203 aa9.13□□□□□ -0.95
CAPN3-221ENST00000638141 TIMM17AQ99595 171 aa9.13□□□□□ -0.95
CAPN3-221ENST00000638141 C11orf21Q9P2W6 132 aa9.13□□□□□ -0.95
CAPN3-221ENST00000638141 BOD1L1Q8NFC6 3051 aa9.12□□□□□ -0.95
CAPN3-221ENST00000638141 IGIPA6NJ69 53 aa9.12□□□□□ -0.95
CAPN3-221ENST00000638141 LEPROTO15243 131 aa9.12□□□□□ -0.95
CAPN3-221ENST00000638141 IGLV1-47P01700 117 aa9.12□□□□□ -0.95
CAPN3-221ENST00000638141 LOXP28300 417 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-221ENST00000638141 Q1RN00 199 aa9.12□□□□□ -0.95
CAPN3-221ENST00000638141 SPANXN1Q5VSR9 72 aa9.12□□□□□ -0.95
CAPN3-221ENST00000638141 DYNAPQ8N1N2 210 aa9.12□□□□□ -0.95
CAPN3-221ENST00000638141 MRAPQ8TCY5 172 aa9.12□□□□□ -0.95
CAPN3-221ENST00000638141 MAP1BP46821 2468 aaKnown RBP9.12□□□□□ -0.95
CAPN3-221ENST00000638141 TSHBP01222 138 aa9.12□□□□□ -0.95
CAPN3-221ENST00000638141 COX6CP09669 75 aa9.12□□□□□ -0.95
CAPN3-221ENST00000638141 GAGE2AQ6NT46 116 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms