RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 TRAV1-1A0A0B4J248 108 aa9.98□□□□□ -0.81
CACNA1A-249ENST00000637777 NBDYA0A0U1RRE5 68 aa9.98□□□□□ -0.81
CACNA1A-249ENST00000637777 A0A1B0GVG6 124 aa9.98□□□□□ -0.81
CACNA1A-249ENST00000637777 PGPEP1LA6NFU8 196 aa9.98□□□□□ -0.81
CACNA1A-249ENST00000637777 NKX2-5P52952 324 aaPredicted RBP9.98□□□□□ -0.81
CACNA1A-249ENST00000637777 LINC00336Q6ZUF6 198 aa9.98□□□□□ -0.81
CACNA1A-249ENST00000637777 NEGR1Q7Z3B1 354 aa9.98□□□□□ -0.81
CACNA1A-249ENST00000637777 TXNDC17Q9BRA2 123 aa9.98□□□□□ -0.81
CACNA1A-249ENST00000637777 MRPS16Q9Y3D3 137 aaKnown RBP9.98□□□□□ -0.81
CACNA1A-249ENST00000637777 PHLDA3Q9Y5J5 127 aa9.98□□□□□ -0.81
CACNA1A-249ENST00000637777 FRAS1Q86XX4 4008 aa9.98□□□□□ -0.81
CACNA1A-249ENST00000637777 KRBOX1C9JBD0 128 aa9.97□□□□□ -0.81
CACNA1A-249ENST00000637777 K7EQD1 137 aa9.97□□□□□ -0.81
CACNA1A-249ENST00000637777 MGST1P10620 155 aaKnown RBP9.97□□□□□ -0.81
CACNA1A-249ENST00000637777 RPL35P42766 123 aaKnown RBP9.97□□□□□ -0.81
CACNA1A-249ENST00000637777 CRIP1P50238 77 aa9.97□□□□□ -0.81
CACNA1A-249ENST00000637777 ZNF674Q2M3X9 581 aa9.97□□□□□ -0.81
CACNA1A-249ENST00000637777 TTC32Q5I0X7 151 aa9.97□□□□□ -0.81
CACNA1A-249ENST00000637777 CFAP126Q5VTH2 177 aa9.97□□□□□ -0.81
CACNA1A-249ENST00000637777 ALKAL2Q6UX46 152 aa9.97□□□□□ -0.81
CACNA1A-249ENST00000637777 PRADC1Q9BSG0 188 aa9.97□□□□□ -0.81
CACNA1A-249ENST00000637777 PRSS29PA6NIE9 313 aa9.96□□□□□ -0.82
CACNA1A-249ENST00000637777 RS1O15537 224 aa9.96□□□□□ -0.82
CACNA1A-249ENST00000637777 ARMS2P0C7Q2 107 aa9.96□□□□□ -0.82
CACNA1A-249ENST00000637777 MEF2BQ02080 365 aaPredicted RBP9.96□□□□□ -0.82
CACNA1A-249ENST00000637777 Q6ZR54 194 aa9.96□□□□□ -0.82
CACNA1A-249ENST00000637777 IL36BQ9NZH7 164 aa9.96□□□□□ -0.82
CACNA1A-249ENST00000637777 DNAH10Q8IVF4 4471 aa9.95□□□□□ -0.82
CACNA1A-249ENST00000637777 LOC100131303A0A0U1RQF7 123 aa9.95□□□□□ -0.82
CACNA1A-249ENST00000637777 A8MWV9 139 aa9.95□□□□□ -0.82
CACNA1A-249ENST00000637777 M0R381 172 aa9.95□□□□□ -0.82
CACNA1A-249ENST00000637777 PDE6DO43924 150 aa9.95□□□□□ -0.82
CACNA1A-249ENST00000637777 CIDEAO60543 219 aa9.95□□□□□ -0.82
CACNA1A-249ENST00000637777 NXPH4O95158 308 aa9.95□□□□□ -0.82
CACNA1A-249ENST00000637777 BCL2P10415 239 aa9.95□□□□□ -0.82
CACNA1A-249ENST00000637777 GATA1P15976 413 aaPredicted RBP9.95□□□□□ -0.82
CACNA1A-249ENST00000637777 RHOHQ15669 191 aa9.95□□□□□ -0.82
CACNA1A-249ENST00000637777 LINC01559Q495D7 138 aa9.95□□□□□ -0.82
CACNA1A-249ENST00000637777 CENPWQ5EE01 88 aa9.95□□□□□ -0.82
CACNA1A-249ENST00000637777 FAM74A4Q5TZK3 123 aa9.95□□□□□ -0.82
CACNA1A-249ENST00000637777 COX8CQ7Z4L0 72 aa9.95□□□□□ -0.82
CACNA1A-249ENST00000637777 DERL1Q9BUN8 251 aa9.95□□□□□ -0.82
CACNA1A-249ENST00000637777 MED9Q9NWA0 146 aa9.95□□□□□ -0.82
CACNA1A-249ENST00000637777 SIVA1O15304 175 aa9.94□□□□□ -0.82
CACNA1A-249ENST00000637777 GNG4P50150 75 aa9.94□□□□□ -0.82
CACNA1A-249ENST00000637777 BLOC1S1P78537 153 aa9.94□□□□□ -0.82
CACNA1A-249ENST00000637777 RPL19P84098 196 aaKnown RBP9.94□□□□□ -0.82
CACNA1A-249ENST00000637777 C6orf223Q8N319 242 aa9.94□□□□□ -0.82
CACNA1A-249ENST00000637777 C11orf52Q96A22 123 aa9.94□□□□□ -0.82
CACNA1A-249ENST00000637777 DAZAP1Q96EP5 407 aaKnown RBP9.94□□□□□ -0.82
CACNA1A-249ENST00000637777 UPK3BQ9BT76 320 aa9.94□□□□□ -0.82
CACNA1A-249ENST00000637777 VAX2Q9UIW0 290 aa9.94□□□□□ -0.82
CACNA1A-249ENST00000637777 RTL8CO15255 209 aa9.93□□□□□ -0.82
CACNA1A-249ENST00000637777 TAGLN2P37802 199 aaKnown RBP9.93□□□□□ -0.82
CACNA1A-249ENST00000637777 DMRTA1Q5VZB9 504 aa9.93□□□□□ -0.82
CACNA1A-249ENST00000637777 LYPD5Q6UWN5 251 aa9.93□□□□□ -0.82
CACNA1A-249ENST00000637777 SH2D6Q7Z4S9 175 aa9.93□□□□□ -0.82
CACNA1A-249ENST00000637777 ZFP82Q8N141 532 aa9.93□□□□□ -0.82
CACNA1A-249ENST00000637777 SLC25A29Q8N8R3 303 aa9.93□□□□□ -0.82
CACNA1A-249ENST00000637777 PTH2Q96A98 100 aa9.93□□□□□ -0.82
CACNA1A-249ENST00000637777 PARLQ9H300 379 aa9.93□□□□□ -0.82
CACNA1A-249ENST00000637777 RAB19A4D1S5 217 aa9.92□□□□□ -0.82
CACNA1A-249ENST00000637777 SSTP61278 116 aa9.92□□□□□ -0.82
CACNA1A-249ENST00000637777 JPT2Q9H910 190 aa9.92□□□□□ -0.82
CACNA1A-249ENST00000637777 BOLA1Q9Y3E2 137 aa9.92□□□□□ -0.82
CACNA1A-249ENST00000637777 A0A087WWL8 130 aa9.91□□□□□ -0.82
CACNA1A-249ENST00000637777 TRBV6-4A0A1B0GX49 114 aa9.91□□□□□ -0.82
CACNA1A-249ENST00000637777 RHODO00212 210 aa9.91□□□□□ -0.82
CACNA1A-249ENST00000637777 CEBPGP53567 150 aa9.91□□□□□ -0.82
CACNA1A-249ENST00000637777 MLST8Q9BVC4 326 aa9.91□□□□□ -0.82
CACNA1A-249ENST00000637777 TPPP3Q9BW30 176 aa9.91□□□□□ -0.82
CACNA1A-249ENST00000637777 PIK3CD-AS1Q5SR53 167 aa9.9□□□□□ -0.82
CACNA1A-249ENST00000637777 DNLZQ5SXM8 178 aa9.9□□□□□ -0.82
CACNA1A-249ENST00000637777 SPANXN1Q5VSR9 72 aa9.9□□□□□ -0.82
CACNA1A-249ENST00000637777 ZFP2Q6ZN57 461 aa9.9□□□□□ -0.82
CACNA1A-249ENST00000637777 BIRC6Q9NR09 4857 aa9.9□□□□□ -0.82
CACNA1A-249ENST00000637777 TRAV9-2A0A087WT02 112 aa9.89□□□□□ -0.83
CACNA1A-249ENST00000637777 MUC21A0A0G2JKD1 596 aa9.89□□□□□ -0.83
CACNA1A-249ENST00000637777 MUC21A0A140T8X8 626 aa9.89□□□□□ -0.83
CACNA1A-249ENST00000637777 GAGE12JA6NER3 117 aa9.89□□□□□ -0.83
CACNA1A-249ENST00000637777 GAGE1Q13065 139 aa9.89□□□□□ -0.83
CACNA1A-249ENST00000637777 GAGE4Q13068 117 aa9.89□□□□□ -0.83
CACNA1A-249ENST00000637777 GAGE5Q13069 117 aa9.89□□□□□ -0.83
CACNA1A-249ENST00000637777 GAGE13Q4V321 117 aa9.89□□□□□ -0.83
CACNA1A-249ENST00000637777 OR10J3Q5JRS4 329 aa9.89□□□□□ -0.83
CACNA1A-249ENST00000637777 OR2D3Q8NGH3 330 aa9.89□□□□□ -0.83
CACNA1A-249ENST00000637777 SAMD10Q9BYL1 202 aa9.89□□□□□ -0.83
CACNA1A-249ENST00000637777 BIN3Q9NQY0 253 aa9.89□□□□□ -0.83
CACNA1A-249ENST00000637777 LY96Q9Y6Y9 160 aa9.89□□□□□ -0.83
CACNA1A-249ENST00000637777 A0A1W2PPQ1 181 aa9.88□□□□□ -0.83
CACNA1A-249ENST00000637777 RBFOX3A6NFN3 312 aa9.88□□□□□ -0.83
CACNA1A-249ENST00000637777 P01737 135 aa9.88□□□□□ -0.83
CACNA1A-249ENST00000637777 MED14OSP0DP75 135 aa9.88□□□□□ -0.83
CACNA1A-249ENST00000637777 EVI2AP22794 236 aa9.88□□□□□ -0.83
CACNA1A-249ENST00000637777 WFDC10BQ8IUB3 73 aa9.88□□□□□ -0.83
CACNA1A-249ENST00000637777 OR10AG1Q8NH19 301 aa9.88□□□□□ -0.83
CACNA1A-249ENST00000637777 ATP6V0E2Q8NHE4 81 aa9.88□□□□□ -0.83
CACNA1A-249ENST00000637777 EIF5A2Q9GZV4 153 aaKnown RBP9.88□□□□□ -0.83
CACNA1A-249ENST00000637777 DNAH2Q9P225 4427 aa9.87□□□□□ -0.83
CACNA1A-249ENST00000637777 TRAV8-6A0A0B4J262 113 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms