RNA–Protein interactions for RNA: ENST00000637367.1

SCN2A-216, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 4,408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-216ENST00000637367 FAM223BA6NKX1 122 aa5.09□□□□□ -1.59
SCN2A-216ENST00000637367 LOXL1Q08397 574 aaPredicted RBP5.09□□□□□ -1.59
SCN2A-216ENST00000637367 FAM223AQ8IWN6 122 aa5.09□□□□□ -1.59
SCN2A-216ENST00000637367 ZNRF2Q8NHG8 242 aa5.09□□□□□ -1.59
SCN2A-216ENST00000637367 NCKAP5O14513 1909 aa5.09□□□□□ -1.59
SCN2A-216ENST00000637367 ADAMTS9Q9P2N4 1935 aa5.09□□□□□ -1.59
SCN2A-216ENST00000637367 KRTAP27-1Q3LI81 207 aa5.09□□□□□ -1.6
SCN2A-216ENST00000637367 LINC01545Q5VT33 79 aa5.09□□□□□ -1.6
SCN2A-216ENST00000637367 ZNF503Q96F45 646 aa5.09□□□□□ -1.6
SCN2A-216ENST00000637367 TNRC6AQ8NDV7 1962 aaKnown RBP5.09□□□□□ -1.6
SCN2A-216ENST00000637367 IGHV1OR15-1A0A075B7D0 117 aa5.08□□□□□ -1.6
SCN2A-216ENST00000637367 LINC00322Q6ZN03 302 aaPredicted RBP5.08□□□□□ -1.6
SCN2A-216ENST00000637367 RNF223E7ERA6 249 aa5.08□□□□□ -1.6
SCN2A-216ENST00000637367 LEPROTO15243 131 aa5.08□□□□□ -1.6
SCN2A-216ENST00000637367 LHBP01229 141 aa5.08□□□□□ -1.6
SCN2A-216ENST00000637367 INSP01308 110 aa5.08□□□□□ -1.6
SCN2A-216ENST00000637367 LGALS1P09382 135 aaKnown RBP5.08□□□□□ -1.6
SCN2A-216ENST00000637367 TCTEX1D4Q5JR98 221 aa5.08□□□□□ -1.6
SCN2A-216ENST00000637367 ATP6V0BQ99437 205 aa5.08□□□□□ -1.6
SCN2A-216ENST00000637367 NUP210Q8TEM1 1887 aaPredicted RBP5.08□□□□□ -1.6
SCN2A-216ENST00000637367 IGHV1-69DA0A0B4J2H0 117 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 A0A1W2PNU3 283 aaPredicted RBP5.07□□□□□ -1.6
SCN2A-216ENST00000637367 B5MCH6 92 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 I3L2K1 104 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 IGHV1-69P01742 117 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 C9orf153Q5TBE3 101 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 TMEM190Q8WZ59 177 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 SCRT2Q9NQ03 307 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 IGLL5B9A064 214 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 I3L3M4 83 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 GDF5OSQ5U4N7 250 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 KAAG1Q9UBP8 84 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 C2orf70A6NJV1 201 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 MSMBP08118 114 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 CARD19Q96LW7 228 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 C2orf16Q68DN1 1984 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 A0A096LPF7 62 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 INS-IGF2F8WCM5 200 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 GAGE7O76087 117 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 GAGE12FP0CL80 117 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 GAGE12GP0CL81 117 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 GAGE12IP0CL82 117 aa5.07□□□□□ -1.6
SCN2A-216ENST00000637367 A0A0J9YXV3 536 aa5.06□□□□□ -1.6
SCN2A-216ENST00000637367 SHISA9B4DS77 424 aa5.06□□□□□ -1.6
SCN2A-216ENST00000637367 CTSGP08311 255 aa5.06□□□□□ -1.6
SCN2A-216ENST00000637367 RPL39P62891 51 aaKnown RBP5.06□□□□□ -1.6
SCN2A-216ENST00000637367 GAGE6Q13070 117 aa5.06□□□□□ -1.6
SCN2A-216ENST00000637367 PTH2Q96A98 100 aa5.06□□□□□ -1.6
SCN2A-216ENST00000637367 POLQO75417 2590 aa5.06□□□□□ -1.6
SCN2A-216ENST00000637367 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.06□□□□□ -1.6
SCN2A-216ENST00000637367 TRAV12-1A0A0B4J245 112 aa5.06□□□□□ -1.6
SCN2A-216ENST00000637367 IGKV2-29A2NJV5 120 aaPredicted RBP5.06□□□□□ -1.6
SCN2A-216ENST00000637367 DEFB136Q30KP8 78 aa5.06□□□□□ -1.6
SCN2A-216ENST00000637367 CLPSL2Q6UWE3 100 aa5.06□□□□□ -1.6
SCN2A-216ENST00000637367 IGFL3Q6UXB1 125 aa5.06□□□□□ -1.6
SCN2A-216ENST00000637367 TMEM141Q96I45 108 aa5.06□□□□□ -1.6
SCN2A-216ENST00000637367 IGHV7-81A0A0B4J1V7 117 aa5.06□□□□□ -1.6
SCN2A-216ENST00000637367 TINCRA0A1B0GVN0 87 aa5.06□□□□□ -1.6
SCN2A-216ENST00000637367 BLCAPP62952 87 aa5.06□□□□□ -1.6
SCN2A-216ENST00000637367 C1orf229Q6ZS94 237 aaPredicted RBP5.06□□□□□ -1.6
SCN2A-216ENST00000637367 SEM1Q6ZVN7 128 aa5.06□□□□□ -1.6
SCN2A-216ENST00000637367 C3orf56Q8N813 242 aa5.06□□□□□ -1.6
SCN2A-216ENST00000637367 C15orf53Q8NAA6 179 aa5.06□□□□□ -1.6
SCN2A-216ENST00000637367 NDUFA4O00483 81 aa5.05□□□□□ -1.6
SCN2A-216ENST00000637367 SIVA1O15304 175 aa5.05□□□□□ -1.6
SCN2A-216ENST00000637367 IGLV2-8P01709 118 aa5.05□□□□□ -1.6
SCN2A-216ENST00000637367 K7ENP7 123 aa5.05□□□□□ -1.6
SCN2A-216ENST00000637367 P0C879 139 aa5.05□□□□□ -1.6
SCN2A-216ENST00000637367 PLA2G2CQ5R387 149 aa5.05□□□□□ -1.6
SCN2A-216ENST00000637367 DAND5Q8N907 189 aa5.05□□□□□ -1.6
SCN2A-216ENST00000637367 TP53TG3Q9ULZ0 132 aa5.05□□□□□ -1.6
SCN2A-216ENST00000637367 RNF114Q9Y508 228 aa5.05□□□□□ -1.6
SCN2A-216ENST00000637367 A4D1N5 150 aa5.05□□□□□ -1.6
SCN2A-216ENST00000637367 RBAKDNA6NC62 111 aa5.05□□□□□ -1.6
SCN2A-216ENST00000637367 CFC1BP0CG36 223 aa5.05□□□□□ -1.6
SCN2A-216ENST00000637367 CFC1P0CG37 223 aa5.05□□□□□ -1.6
SCN2A-216ENST00000637367 SPATA12Q7Z6I5 190 aa5.05□□□□□ -1.6
SCN2A-216ENST00000637367 C1QTNF4Q9BXJ3 329 aa5.05□□□□□ -1.6
SCN2A-216ENST00000637367 SS18L2Q9UHA2 77 aa5.05□□□□□ -1.6
SCN2A-216ENST00000637367 C20orf78Q9BR46 151 aa5.05□□□□□ -1.6
SCN2A-216ENST00000637367 IGKV1D-37A0A075B6S9 117 aa5.04□□□□□ -1.6
SCN2A-216ENST00000637367 IGHV7-4-1A0A0J9YVY3 117 aa5.04□□□□□ -1.6
SCN2A-216ENST00000637367 BUB3O43684 328 aa5.04□□□□□ -1.6
SCN2A-216ENST00000637367 PRB1P04280 392 aa5.04□□□□□ -1.6
SCN2A-216ENST00000637367 TAL2Q16559 108 aa5.04□□□□□ -1.6
SCN2A-216ENST00000637367 ZNF493Q6ZR52 646 aa5.04□□□□□ -1.6
SCN2A-216ENST00000637367 IGLV11-55A0A075B6I3 123 aa5.04□□□□□ -1.6
SCN2A-216ENST00000637367 TEX22C9J3V5 150 aa5.04□□□□□ -1.6
SCN2A-216ENST00000637367 FOXI2Q6ZQN5 318 aa5.04□□□□□ -1.6
SCN2A-216ENST00000637367 YPEL4Q96NS1 127 aa5.04□□□□□ -1.6
SCN2A-216ENST00000637367 RHODO00212 210 aa5.04□□□□□ -1.6
SCN2A-216ENST00000637367 IGLV2-23P01705 113 aa5.04□□□□□ -1.6
SCN2A-216ENST00000637367 IGHV4-59P01825 116 aa5.04□□□□□ -1.6
SCN2A-216ENST00000637367 HOXB4P17483 251 aaPredicted RBP5.04□□□□□ -1.6
SCN2A-216ENST00000637367 HOXD3P31249 432 aaPredicted RBP5.04□□□□□ -1.6
SCN2A-216ENST00000637367 CRYBA4P53673 196 aa5.04□□□□□ -1.6
SCN2A-216ENST00000637367 HAMPP81172 84 aa5.04□□□□□ -1.6
SCN2A-216ENST00000637367 BRCA2P51587 3418 aa5.04□□□□□ -1.6
SCN2A-216ENST00000637367 ZNF106Q9H2Y7 1883 aaKnown RBP5.04□□□□□ -1.6
SCN2A-216ENST00000637367 IFITM1P13164 125 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms