RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 ZNF506Q5JVG8 444 aa5.78□□□□□ -1.48
PNKP-226ENST00000636840 DNLZQ5SXM8 178 aa5.78□□□□□ -1.48
PNKP-226ENST00000636840 POM121L12Q8N7R1 296 aa5.78□□□□□ -1.48
PNKP-226ENST00000636840 PCNPQ8WW12 178 aaKnown RBP5.78□□□□□ -1.48
PNKP-226ENST00000636840 MUC4Q99102 2169 aa5.78□□□□□ -1.48
PNKP-226ENST00000636840 IL36BQ9NZH7 164 aa5.78□□□□□ -1.48
PNKP-226ENST00000636840 PHLDA3Q9Y5J5 127 aa5.78□□□□□ -1.48
PNKP-226ENST00000636840 TMSB15BA0A087X1C1 80 aa5.77□□□□□ -1.49
PNKP-226ENST00000636840 A8MWV9 139 aa5.77□□□□□ -1.49
PNKP-226ENST00000636840 CXCL1P09341 107 aa5.77□□□□□ -1.49
PNKP-226ENST00000636840 HOXA5P20719 270 aa5.77□□□□□ -1.49
PNKP-226ENST00000636840 CEBPGP53567 150 aa5.77□□□□□ -1.49
PNKP-226ENST00000636840 FAM3BP58499 235 aaPredicted RBP5.77□□□□□ -1.49
PNKP-226ENST00000636840 PEA15Q15121 130 aa5.77□□□□□ -1.49
PNKP-226ENST00000636840 MRPL23Q16540 153 aaKnown RBP5.77□□□□□ -1.49
PNKP-226ENST00000636840 TOR2AQ5JU69 321 aa5.77□□□□□ -1.49
PNKP-226ENST00000636840 C9orf85Q96MD7 179 aa5.77□□□□□ -1.49
PNKP-226ENST00000636840 FAM210AQ96ND0 272 aa5.77□□□□□ -1.49
PNKP-226ENST00000636840 DERL1Q9BUN8 251 aa5.77□□□□□ -1.49
PNKP-226ENST00000636840 ICOSQ9Y6W8 199 aa5.77□□□□□ -1.49
PNKP-226ENST00000636840 PGPEP1LA6NFU8 196 aa5.76□□□□□ -1.49
PNKP-226ENST00000636840 RS1O15537 224 aa5.76□□□□□ -1.49
PNKP-226ENST00000636840 P01737 135 aa5.76□□□□□ -1.49
PNKP-226ENST00000636840 SFTA3P0C7M3 94 aa5.76□□□□□ -1.49
PNKP-226ENST00000636840 MED14OSP0DP75 135 aa5.76□□□□□ -1.49
PNKP-226ENST00000636840 RNASE3P12724 160 aaKnown RBP5.76□□□□□ -1.49
PNKP-226ENST00000636840 CRYBA4P53673 196 aa5.76□□□□□ -1.49
PNKP-226ENST00000636840 FHL2Q14192 279 aa5.76□□□□□ -1.49
PNKP-226ENST00000636840 SH2D6Q7Z4S9 175 aa5.76□□□□□ -1.49
PNKP-226ENST00000636840 ZFP82Q8N141 532 aa5.76□□□□□ -1.49
PNKP-226ENST00000636840 OR2D3Q8NGH3 330 aa5.76□□□□□ -1.49
PNKP-226ENST00000636840 ZNF479Q96JC4 524 aa5.76□□□□□ -1.49
PNKP-226ENST00000636840 PRADC1Q9BSG0 188 aa5.76□□□□□ -1.49
PNKP-226ENST00000636840 SMDT1Q9H4I9 107 aa5.76□□□□□ -1.49
PNKP-226ENST00000636840 SACSQ9NZJ4 4579 aa5.75□□□□□ -1.49
PNKP-226ENST00000636840 DNAH1Q9P2D7 4330 aa5.75□□□□□ -1.49
PNKP-226ENST00000636840 H3BVH4 76 aa5.75□□□□□ -1.49
PNKP-226ENST00000636840 RHODO00212 210 aa5.75□□□□□ -1.49
PNKP-226ENST00000636840 FAM74A3Q4VXF1 159 aa5.75□□□□□ -1.49
PNKP-226ENST00000636840 SPANXN1Q5VSR9 72 aa5.75□□□□□ -1.49
PNKP-226ENST00000636840 CFAP126Q5VTH2 177 aa5.75□□□□□ -1.49
PNKP-226ENST00000636840 ZFP2Q6ZN57 461 aa5.75□□□□□ -1.49
PNKP-226ENST00000636840 PARLQ9H300 379 aa5.75□□□□□ -1.49
PNKP-226ENST00000636840 LY96Q9Y6Y9 160 aa5.75□□□□□ -1.49
PNKP-226ENST00000636840 KMT2CQ8NEZ4 4911 aaKnown RBP5.75□□□□□ -1.49
PNKP-226ENST00000636840 TRBV6-4A0A1B0GX49 114 aa5.74□□□□□ -1.49
PNKP-226ENST00000636840 A0A1W2PPQ1 181 aa5.74□□□□□ -1.49
PNKP-226ENST00000636840 ZNF727A8MUV8 499 aa5.74□□□□□ -1.49
PNKP-226ENST00000636840 F2Z2F3 143 aa5.74□□□□□ -1.49
PNKP-226ENST00000636840 M0R381 172 aa5.74□□□□□ -1.49
PNKP-226ENST00000636840 IGLV2-8P01709 118 aa5.74□□□□□ -1.49
PNKP-226ENST00000636840 SMIM17P0DL12 118 aa5.74□□□□□ -1.49
PNKP-226ENST00000636840 SRIP30626 198 aa5.74□□□□□ -1.49
PNKP-226ENST00000636840 DMRTA1Q5VZB9 504 aa5.74□□□□□ -1.49
PNKP-226ENST00000636840 NEGR1Q7Z3B1 354 aa5.74□□□□□ -1.49
PNKP-226ENST00000636840 OCC1Q8TAD7 63 aa5.74□□□□□ -1.49
PNKP-226ENST00000636840 VSIG2Q96IQ7 327 aa5.74□□□□□ -1.49
PNKP-226ENST00000636840 SMIM7Q9BQ49 75 aa5.74□□□□□ -1.49
PNKP-226ENST00000636840 ALMS1Q8TCU4 4167 aa5.74□□□□□ -1.49
PNKP-226ENST00000636840 A0A096LPF7 62 aa5.73□□□□□ -1.49
PNKP-226ENST00000636840 C19orf71A6NCJ1 209 aa5.73□□□□□ -1.49
PNKP-226ENST00000636840 GATCO43716 136 aaKnown RBP5.73□□□□□ -1.49
PNKP-226ENST00000636840 SRP19P09132 144 aaKnown RBP5.73□□□□□ -1.49
PNKP-226ENST00000636840 OR5AL1P0C617 328 aa5.73□□□□□ -1.49
PNKP-226ENST00000636840 GYPEP15421 78 aa5.73□□□□□ -1.49
PNKP-226ENST00000636840 GATA1P15976 413 aaPredicted RBP5.73□□□□□ -1.49
PNKP-226ENST00000636840 CACNG7P62955 275 aa5.73□□□□□ -1.49
PNKP-226ENST00000636840 RPL19P84098 196 aaKnown RBP5.73□□□□□ -1.49
PNKP-226ENST00000636840 RHOHQ15669 191 aa5.73□□□□□ -1.49
PNKP-226ENST00000636840 TMEM241Q24JQ0 296 aa5.73□□□□□ -1.49
PNKP-226ENST00000636840 FER1L6-AS1Q8NA97 138 aa5.73□□□□□ -1.49
PNKP-226ENST00000636840 NUDT10Q8NFP7 164 aa5.73□□□□□ -1.49
PNKP-226ENST00000636840 NUDT11Q96G61 164 aa5.73□□□□□ -1.49
PNKP-226ENST00000636840 SFRP2Q96HF1 295 aa5.73□□□□□ -1.49
PNKP-226ENST00000636840 TPPP3Q9BW30 176 aa5.73□□□□□ -1.49
PNKP-226ENST00000636840 SCRT2Q9NQ03 307 aa5.73□□□□□ -1.49
PNKP-226ENST00000636840 VPS13DQ5THJ4 4388 aa5.73□□□□□ -1.49
PNKP-226ENST00000636840 TRBV20OR9-2A0A075B6H5 130 aa5.72□□□□□ -1.49
PNKP-226ENST00000636840 IGHV3-73A0A0B4J1V6 119 aa5.72□□□□□ -1.49
PNKP-226ENST00000636840 A8MWL6 223 aa5.72□□□□□ -1.49
PNKP-226ENST00000636840 SNAI2O43623 268 aa5.72□□□□□ -1.49
PNKP-226ENST00000636840 ERVFC1-1P60608 527 aa5.72□□□□□ -1.49
PNKP-226ENST00000636840 WDR73Q6P4I2 378 aa5.72□□□□□ -1.49
PNKP-226ENST00000636840 C15orf54Q8N8G6 183 aa5.72□□□□□ -1.49
PNKP-226ENST00000636840 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.72□□□□□ -1.49
PNKP-226ENST00000636840 SSBP4Q9BWG4 385 aaPredicted RBP5.72□□□□□ -1.49
PNKP-226ENST00000636840 F5H697 171 aa5.71□□□□□ -1.5
PNKP-226ENST00000636840 K7EQD1 137 aa5.71□□□□□ -1.5
PNKP-226ENST00000636840 SSTP61278 116 aa5.71□□□□□ -1.5
PNKP-226ENST00000636840 ESRGQ1W209 222 aa5.71□□□□□ -1.5
PNKP-226ENST00000636840 SOHLH1Q5JUK2 328 aa5.71□□□□□ -1.5
PNKP-226ENST00000636840 FAM74A4Q5TZK3 123 aa5.71□□□□□ -1.5
PNKP-226ENST00000636840 FAM231DQ6ZW35 169 aa5.71□□□□□ -1.5
PNKP-226ENST00000636840 SMIM15Q7Z3B0 74 aa5.71□□□□□ -1.5
PNKP-226ENST00000636840 SLC25A29Q8N8R3 303 aa5.71□□□□□ -1.5
PNKP-226ENST00000636840 BORCS7Q96B45 105 aa5.71□□□□□ -1.5
PNKP-226ENST00000636840 RPP21Q9H633 154 aaKnown RBP5.71□□□□□ -1.5
PNKP-226ENST00000636840 Q9H8V8 135 aa5.71□□□□□ -1.5
PNKP-226ENST00000636840 MRPS16Q9Y3D3 137 aaKnown RBP5.71□□□□□ -1.5
PNKP-226ENST00000636840 LINC00588Q9Y4M8 146 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms