RNA–Protein interactions for RNA: ENST00000635915.1

CLN5-206, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-206ENST00000635915 C7orf71A4D174 169 aa13.33□□□□□ -0.28
CLN5-206ENST00000635915 CCL24O00175 119 aa13.33□□□□□ -0.28
CLN5-206ENST00000635915 BTF3P20290 206 aaKnown RBP13.33□□□□□ -0.28
CLN5-206ENST00000635915 SCGB2A2Q13296 93 aa13.33□□□□□ -0.28
CLN5-206ENST00000635915 DEFB114Q30KQ6 69 aa13.33□□□□□ -0.28
CLN5-206ENST00000635915 CD300EQ496F6 205 aaPredicted RBP13.33□□□□□ -0.28
CLN5-206ENST00000635915 FAM159AQ6UWV7 190 aa13.33□□□□□ -0.28
CLN5-206ENST00000635915 C2CD3Q4AC94 2353 aa13.32□□□□□ -0.28
CLN5-206ENST00000635915 CACNG7P62955 275 aa13.32□□□□□ -0.28
CLN5-206ENST00000635915 FOXI2Q6ZQN5 318 aa13.32□□□□□ -0.28
CLN5-206ENST00000635915 C16orf95Q9H693 158 aa13.32□□□□□ -0.28
CLN5-206ENST00000635915 LEPP41159 167 aa13.32□□□□□ -0.28
CLN5-206ENST00000635915 SMIM15Q7Z3B0 74 aa13.32□□□□□ -0.28
CLN5-206ENST00000635915 MCRIP2Q9BUT9 160 aaKnown RBP13.32□□□□□ -0.28
CLN5-206ENST00000635915 VAMP8Q9BV40 100 aa13.32□□□□□ -0.28
CLN5-206ENST00000635915 A0A096LNJ9 63 aa13.31□□□□□ -0.28
CLN5-206ENST00000635915 TCF21O43680 179 aa13.31□□□□□ -0.28
CLN5-206ENST00000635915 TNFRSF6BO95407 300 aa13.31□□□□□ -0.28
CLN5-206ENST00000635915 CD7P09564 240 aa13.31□□□□□ -0.28
CLN5-206ENST00000635915 CDKN1BP46527 198 aa13.31□□□□□ -0.28
CLN5-206ENST00000635915 FHL3Q13643 280 aa13.31□□□□□ -0.28
CLN5-206ENST00000635915 AMTNQ6UX39 209 aa13.31□□□□□ -0.28
CLN5-206ENST00000635915 SCRT2Q9NQ03 307 aa13.31□□□□□ -0.28
CLN5-206ENST00000635915 TMEM160Q9NX00 188 aa13.31□□□□□ -0.28
CLN5-206ENST00000635915 H0Y8G0 127 aa13.31□□□□□ -0.28
CLN5-206ENST00000635915 ODF3Q96PU9 254 aa13.31□□□□□ -0.28
CLN5-206ENST00000635915 KIR2DL5BA0A0G2JN68 375 aa13.3□□□□□ -0.28
CLN5-206ENST00000635915 KIR2DL5BA0A0G2JPC4 375 aa13.3□□□□□ -0.28
CLN5-206ENST00000635915 EREGO14944 169 aa13.3□□□□□ -0.28
CLN5-206ENST00000635915 PPBPP02775 128 aa13.3□□□□□ -0.28
CLN5-206ENST00000635915 MAJINQ3KP22 176 aa13.3□□□□□ -0.28
CLN5-206ENST00000635915 KIR2DL5AQ8N109 375 aa13.3□□□□□ -0.28
CLN5-206ENST00000635915 C14orf178Q8N769 122 aaPredicted RBP13.3□□□□□ -0.28
CLN5-206ENST00000635915 TMEM70Q9BUB7 260 aa13.3□□□□□ -0.28
CLN5-206ENST00000635915 TSSC4Q9Y5U2 329 aaPredicted RBP13.3□□□□□ -0.28
CLN5-206ENST00000635915 NOTCH3Q9UM47 2321 aa13.29□□□□□ -0.28
CLN5-206ENST00000635915 DUSP14O95147 198 aaKnown RBP13.29□□□□□ -0.28
CLN5-206ENST00000635915 ZNF705AQ6ZN79 300 aaPredicted RBP13.29□□□□□ -0.28
CLN5-206ENST00000635915 INAFM1C9JVW0 142 aa13.29□□□□□ -0.28
CLN5-206ENST00000635915 SYS1-DBNDD2H3BUS1 97 aa13.28□□□□□ -0.28
CLN5-206ENST00000635915 LURAP1LQ8IV03 231 aa13.28□□□□□ -0.28
CLN5-206ENST00000635915 MAP1LC3AQ9H492 121 aa13.28□□□□□ -0.28
CLN5-206ENST00000635915 RBMY1BA6NDE4 496 aaKnown RBP13.28□□□□□ -0.28
CLN5-206ENST00000635915 RBMY1EA6NEQ0 496 aaKnown RBP13.28□□□□□ -0.28
CLN5-206ENST00000635915 RBMY1DP0C7P1 496 aaKnown RBP13.28□□□□□ -0.28
CLN5-206ENST00000635915 MAP6D1Q9H9H5 199 aa13.28□□□□□ -0.28
CLN5-206ENST00000635915 MDFICQ9P1T7 246 aa13.28□□□□□ -0.28
CLN5-206ENST00000635915 H3BMM0 161 aa13.27□□□□□ -0.29
CLN5-206ENST00000635915 NRACQ8N912 160 aa13.27□□□□□ -0.29
CLN5-206ENST00000635915 OR2K2Q8NGT1 345 aa13.27□□□□□ -0.29
CLN5-206ENST00000635915 JPT2Q9H910 190 aa13.27□□□□□ -0.29
CLN5-206ENST00000635915 VWFP04275 2813 aa13.27□□□□□ -0.29
CLN5-206ENST00000635915 RBMY1A1P0DJD3 496 aaKnown RBP13.27□□□□□ -0.29
CLN5-206ENST00000635915 RBMY1CP0DJD4 496 aa13.27□□□□□ -0.29
CLN5-206ENST00000635915 TSPOP30536 169 aa13.27□□□□□ -0.29
CLN5-206ENST00000635915 RBMY1FQ15415 496 aaKnown RBP13.27□□□□□ -0.29
CLN5-206ENST00000635915 Q8N1Y9 231 aa13.27□□□□□ -0.29
CLN5-206ENST00000635915 MED14OSP0DP75 135 aa13.26□□□□□ -0.29
CLN5-206ENST00000635915 HLA-DRB4P13762 266 aa13.26□□□□□ -0.29
CLN5-206ENST00000635915 NSUN5P1Q3KNT7 163 aa13.26□□□□□ -0.29
CLN5-206ENST00000635915 SNHG12Q9BXW3 62 aa13.26□□□□□ -0.29
CLN5-206ENST00000635915 ZNF256Q9Y2P7 627 aaPredicted RBP13.26□□□□□ -0.29
CLN5-206ENST00000635915 HLA-DRB4X5D2U9 266 aa13.26□□□□□ -0.29
CLN5-206ENST00000635915 TENM1Q9UKZ4 2725 aa13.26□□□□□ -0.29
CLN5-206ENST00000635915 OR4C46A6NHA9 309 aa13.26□□□□□ -0.29
CLN5-206ENST00000635915 PMCHL2Q9BQD1 86 aa13.26□□□□□ -0.29
CLN5-206ENST00000635915 ZNF747Q9BV97 191 aa13.26□□□□□ -0.29
CLN5-206ENST00000635915 MGPP08493 103 aa13.25□□□□□ -0.29
CLN5-206ENST00000635915 PROK1P58294 105 aa13.25□□□□□ -0.29
CLN5-206ENST00000635915 HSPB8Q9UJY1 196 aa13.25□□□□□ -0.29
CLN5-206ENST00000635915 IGHV3-16A0A0C4DH30 117 aa13.24□□□□□ -0.29
CLN5-206ENST00000635915 CRXO43186 299 aaPredicted RBP13.24□□□□□ -0.29
CLN5-206ENST00000635915 PRM2P04554 102 aa13.24□□□□□ -0.29
CLN5-206ENST00000635915 HTN1P15515 57 aa13.24□□□□□ -0.29
CLN5-206ENST00000635915 SPATA45Q537H7 98 aa13.24□□□□□ -0.29
CLN5-206ENST00000635915 MAP1LC3CQ9BXW4 147 aa13.24□□□□□ -0.29
CLN5-206ENST00000635915 LAMTOR2Q9Y2Q5 125 aa13.24□□□□□ -0.29
CLN5-206ENST00000635915 IGHV1OR15-1A0A075B7D0 117 aa13.24□□□□□ -0.29
CLN5-206ENST00000635915 TRAV2A0A0B4J234 112 aa13.24□□□□□ -0.29
CLN5-206ENST00000635915 DPH3P1Q9H4G8 78 aa13.24□□□□□ -0.29
CLN5-206ENST00000635915 ADARB2-AS1A8MUL3 147 aa13.23□□□□□ -0.29
CLN5-206ENST00000635915 C20orf144Q9BQM9 153 aa13.23□□□□□ -0.29
CLN5-206ENST00000635915 RPL39LQ96EH5 51 aaKnown RBP13.23□□□□□ -0.29
CLN5-206ENST00000635915 AP1S3Q96PC3 154 aa13.23□□□□□ -0.29
CLN5-206ENST00000635915 SPAG8Q99932 426 aaPredicted RBP13.23□□□□□ -0.29
CLN5-206ENST00000635915 NXPH4O95158 308 aa13.22□□□□□ -0.29
CLN5-206ENST00000635915 NDUFA7O95182 113 aa13.22□□□□□ -0.29
CLN5-206ENST00000635915 HBDP02042 147 aa13.22□□□□□ -0.29
CLN5-206ENST00000635915 ODF3L2Q3SX64 289 aa13.22□□□□□ -0.29
CLN5-206ENST00000635915 ZMAT5Q9UDW3 170 aaKnown RBP13.22□□□□□ -0.29
CLN5-206ENST00000635915 IGLV2-18A0A075B6J9 118 aa13.22□□□□□ -0.29
CLN5-206ENST00000635915 A0A087WWL8 130 aa13.22□□□□□ -0.29
CLN5-206ENST00000635915 KRTAP10-3P60369 221 aa13.22□□□□□ -0.29
CLN5-206ENST00000635915 C2orf88Q9BSF0 95 aa13.22□□□□□ -0.29
CLN5-206ENST00000635915 LINC00469Q8N7U9 141 aa13.21□□□□□ -0.29
CLN5-206ENST00000635915 RASL10AQ92737 203 aa13.21□□□□□ -0.29
CLN5-206ENST00000635915 MIEN1Q9BRT3 115 aa13.21□□□□□ -0.29
CLN5-206ENST00000635915 NXT2Q9NPJ8 142 aaKnown RBP13.21□□□□□ -0.29
CLN5-206ENST00000635915 MRAP2Q96G30 205 aa13.21□□□□□ -0.29
CLN5-206ENST00000635915 C9orf85Q96MD7 179 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms