RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 OR4C5Q8NGB2 326 aa10.85□□□□□ -0.67
CLN6-211ENST00000635754 PTH2Q96A98 100 aa10.85□□□□□ -0.67
CLN6-211ENST00000635754 KMT2CQ8NEZ4 4911 aaKnown RBP10.85□□□□□ -0.67
CLN6-211ENST00000635754 TRGV4A0A0C4DH28 118 aa10.84□□□□□ -0.67
CLN6-211ENST00000635754 A0A0J9YY99 117 aa10.84□□□□□ -0.67
CLN6-211ENST00000635754 NUDT3O95989 172 aa10.84□□□□□ -0.67
CLN6-211ENST00000635754 CXCL1P09341 107 aa10.84□□□□□ -0.67
CLN6-211ENST00000635754 SFTA3P0C7M3 94 aa10.84□□□□□ -0.67
CLN6-211ENST00000635754 ARMS2P0C7Q2 107 aa10.84□□□□□ -0.67
CLN6-211ENST00000635754 P0DMU3 169 aa10.84□□□□□ -0.67
CLN6-211ENST00000635754 FAM231AP0DMU4 169 aa10.84□□□□□ -0.67
CLN6-211ENST00000635754 FAM231CP0DMU5 169 aa10.84□□□□□ -0.67
CLN6-211ENST00000635754 RAB14P61106 215 aa10.84□□□□□ -0.67
CLN6-211ENST00000635754 RPL19P84098 196 aaKnown RBP10.84□□□□□ -0.67
CLN6-211ENST00000635754 ZNF479Q96JC4 524 aa10.84□□□□□ -0.67
CLN6-211ENST00000635754 DYNC2H1Q8NCM8 4307 aaKnown RBP10.84□□□□□ -0.67
CLN6-211ENST00000635754 H3BNG1 76 aa10.84□□□□□ -0.67
CLN6-211ENST00000635754 SRP19P09132 144 aaKnown RBP10.84□□□□□ -0.67
CLN6-211ENST00000635754 SLAQ13239 276 aa10.84□□□□□ -0.67
CLN6-211ENST00000635754 PIK3CD-AS1Q5SR53 167 aa10.84□□□□□ -0.67
CLN6-211ENST00000635754 SYT8Q8NBV8 401 aa10.84□□□□□ -0.67
CLN6-211ENST00000635754 PRO0255Q9UI72 69 aa10.84□□□□□ -0.67
CLN6-211ENST00000635754 PHLDA3Q9Y5J5 127 aa10.84□□□□□ -0.67
CLN6-211ENST00000635754 P01737 135 aa10.83□□□□□ -0.68
CLN6-211ENST00000635754 MED14OSP0DP75 135 aa10.83□□□□□ -0.68
CLN6-211ENST00000635754 FHL2Q14192 279 aa10.83□□□□□ -0.68
CLN6-211ENST00000635754 ZNF575Q86XF7 245 aa10.83□□□□□ -0.68
CLN6-211ENST00000635754 POM121L12Q8N7R1 296 aa10.83□□□□□ -0.68
CLN6-211ENST00000635754 OCC1Q8TAD7 63 aa10.83□□□□□ -0.68
CLN6-211ENST00000635754 SMIM7Q9BQ49 75 aa10.83□□□□□ -0.68
CLN6-211ENST00000635754 NACAE9PAV3 2078 aa10.83□□□□□ -0.68
CLN6-211ENST00000635754 C19orf71A6NCJ1 209 aa10.82□□□□□ -0.68
CLN6-211ENST00000635754 RS1O15537 224 aa10.82□□□□□ -0.68
CLN6-211ENST00000635754 PAX4O43316 350 aa10.82□□□□□ -0.68
CLN6-211ENST00000635754 PEA15Q15121 130 aa10.82□□□□□ -0.68
CLN6-211ENST00000635754 CFAP126Q5VTH2 177 aa10.82□□□□□ -0.68
CLN6-211ENST00000635754 OR2D3Q8NGH3 330 aa10.82□□□□□ -0.68
CLN6-211ENST00000635754 VSIG2Q96IQ7 327 aa10.82□□□□□ -0.68
CLN6-211ENST00000635754 SMDT1Q9H4I9 107 aa10.82□□□□□ -0.68
CLN6-211ENST00000635754 SCRT2Q9NQ03 307 aa10.82□□□□□ -0.68
CLN6-211ENST00000635754 HHLA3Q9XRX5 114 aa10.82□□□□□ -0.68
CLN6-211ENST00000635754 PLECQ15149 4684 aaKnown RBP10.81□□□□□ -0.68
CLN6-211ENST00000635754 XKRY2A2RUG3 117 aa10.81□□□□□ -0.68
CLN6-211ENST00000635754 ZNF727A8MUV8 499 aa10.81□□□□□ -0.68
CLN6-211ENST00000635754 A8MWV9 139 aa10.81□□□□□ -0.68
CLN6-211ENST00000635754 K7EN84 100 aa10.81□□□□□ -0.68
CLN6-211ENST00000635754 CIDEAO60543 219 aa10.81□□□□□ -0.68
CLN6-211ENST00000635754 CRYBA4P53673 196 aa10.81□□□□□ -0.68
CLN6-211ENST00000635754 RPS20P60866 119 aaKnown RBP10.81□□□□□ -0.68
CLN6-211ENST00000635754 UBE2DNLQ8IWF7 75 aa10.81□□□□□ -0.68
CLN6-211ENST00000635754 LYSTQ99698 3801 aa10.81□□□□□ -0.68
CLN6-211ENST00000635754 M0R381 172 aa10.8□□□□□ -0.68
CLN6-211ENST00000635754 ZFP82Q8N141 532 aa10.8□□□□□ -0.68
CLN6-211ENST00000635754 LY96Q9Y6Y9 160 aa10.8□□□□□ -0.68
CLN6-211ENST00000635754 SNAI2O43623 268 aa10.79□□□□□ -0.68
CLN6-211ENST00000635754 NUDT10Q8NFP7 164 aa10.79□□□□□ -0.68
CLN6-211ENST00000635754 NUDT11Q96G61 164 aa10.79□□□□□ -0.68
CLN6-211ENST00000635754 ICOSQ9Y6W8 199 aa10.79□□□□□ -0.68
CLN6-211ENST00000635754 OR5AL1P0C617 328 aa10.78□□□□□ -0.68
CLN6-211ENST00000635754 SRSF3P84103 164 aaKnown RBP10.78□□□□□ -0.68
CLN6-211ENST00000635754 RNF212Q495C1 297 aa10.78□□□□□ -0.68
CLN6-211ENST00000635754 FAM74A3Q4VXF1 159 aa10.78□□□□□ -0.68
CLN6-211ENST00000635754 SSBP4Q9BWG4 385 aaPredicted RBP10.78□□□□□ -0.68
CLN6-211ENST00000635754 RNASE7Q9H1E1 156 aaKnown RBP10.78□□□□□ -0.68
CLN6-211ENST00000635754 A0A096LPF7 62 aa10.77□□□□□ -0.68
CLN6-211ENST00000635754 IGHV3-73A0A0B4J1V6 119 aa10.77□□□□□ -0.68
CLN6-211ENST00000635754 C9JQL5 133 aa10.77□□□□□ -0.68
CLN6-211ENST00000635754 GZMBP10144 247 aa10.77□□□□□ -0.68
CLN6-211ENST00000635754 GATA1P15976 413 aaPredicted RBP10.77□□□□□ -0.68
CLN6-211ENST00000635754 CCL18P55774 89 aa10.77□□□□□ -0.68
CLN6-211ENST00000635754 IFITM2Q01629 132 aa10.77□□□□□ -0.68
CLN6-211ENST00000635754 CLLU1Q5K131 121 aa10.77□□□□□ -0.68
CLN6-211ENST00000635754 SPANXN1Q5VSR9 72 aa10.77□□□□□ -0.68
CLN6-211ENST00000635754 ZFP2Q6ZN57 461 aa10.77□□□□□ -0.68
CLN6-211ENST00000635754 LINC01551Q86U37 167 aa10.77□□□□□ -0.68
CLN6-211ENST00000635754 FER1L6-AS1Q8NA97 138 aa10.77□□□□□ -0.68
CLN6-211ENST00000635754 OR10AG1Q8NH19 301 aa10.77□□□□□ -0.68
CLN6-211ENST00000635754 RPP21Q9H633 154 aaKnown RBP10.77□□□□□ -0.68
CLN6-211ENST00000635754 ALMS1Q8TCU4 4167 aa10.77□□□□□ -0.69
CLN6-211ENST00000635754 RHODO00212 210 aa10.76□□□□□ -0.69
CLN6-211ENST00000635754 NXPH4O95158 308 aa10.76□□□□□ -0.69
CLN6-211ENST00000635754 IGLC6P0CF74 106 aa10.76□□□□□ -0.69
CLN6-211ENST00000635754 SFRP2Q96HF1 295 aa10.76□□□□□ -0.69
CLN6-211ENST00000635754 TPPP3Q9BW30 176 aa10.76□□□□□ -0.69
CLN6-211ENST00000635754 JPT2Q9H910 190 aa10.76□□□□□ -0.69
CLN6-211ENST00000635754 PGPEP1Q9NXJ5 209 aa10.76□□□□□ -0.69
CLN6-211ENST00000635754 ERVFC1-1P60608 527 aa10.75□□□□□ -0.69
CLN6-211ENST00000635754 MRPL23Q16540 153 aaKnown RBP10.75□□□□□ -0.69
CLN6-211ENST00000635754 TMEM241Q24JQ0 296 aa10.75□□□□□ -0.69
CLN6-211ENST00000635754 FAM74A4Q5TZK3 123 aa10.75□□□□□ -0.69
CLN6-211ENST00000635754 FAM231DQ6ZW35 169 aa10.75□□□□□ -0.69
CLN6-211ENST00000635754 MUC21A0A0G2JKD1 596 aa10.75□□□□□ -0.69
CLN6-211ENST00000635754 MUC21A0A140T8X8 626 aa10.75□□□□□ -0.69
CLN6-211ENST00000635754 TRBV6-4A0A1B0GX49 114 aa10.75□□□□□ -0.69
CLN6-211ENST00000635754 A0A1W2PPQ1 181 aa10.75□□□□□ -0.69
CLN6-211ENST00000635754 GATCO43716 136 aaKnown RBP10.75□□□□□ -0.69
CLN6-211ENST00000635754 GYPEP15421 78 aa10.75□□□□□ -0.69
CLN6-211ENST00000635754 SRIP30626 198 aa10.75□□□□□ -0.69
CLN6-211ENST00000635754 FAM3BP58499 235 aaPredicted RBP10.75□□□□□ -0.69
CLN6-211ENST00000635754 RHOHQ15669 191 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms