RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 LYPD5Q6UWN5 251 aa9.76□□□□□ -0.85
PNKP-223ENST00000629179 NEGR1Q7Z3B1 354 aa9.76□□□□□ -0.85
PNKP-223ENST00000629179 C6orf223Q8N319 242 aa9.76□□□□□ -0.85
PNKP-223ENST00000629179 NHLRC2Q8NBF2 726 aa9.76□□□□□ -0.85
PNKP-223ENST00000629179 IGHV3-73A0A0B4J1V6 119 aa9.75□□□□□ -0.85
PNKP-223ENST00000629179 GRIFINA4D1Z8 144 aa9.75□□□□□ -0.85
PNKP-223ENST00000629179 KRBOX1C9JBD0 128 aa9.75□□□□□ -0.85
PNKP-223ENST00000629179 GATA1P15976 413 aaPredicted RBP9.75□□□□□ -0.85
PNKP-223ENST00000629179 SRIP30626 198 aa9.75□□□□□ -0.85
PNKP-223ENST00000629179 ASIPP42127 132 aa9.75□□□□□ -0.85
PNKP-223ENST00000629179 SULT1A2P50226 295 aa9.75□□□□□ -0.85
PNKP-223ENST00000629179 RAB5CP51148 216 aa9.75□□□□□ -0.85
PNKP-223ENST00000629179 ZNF674Q2M3X9 581 aa9.75□□□□□ -0.85
PNKP-223ENST00000629179 EIF5AL1Q6IS14 154 aaKnown RBP9.75□□□□□ -0.85
PNKP-223ENST00000629179 SLC51BQ86UW2 128 aa9.75□□□□□ -0.85
PNKP-223ENST00000629179 PCNPQ8WW12 178 aaKnown RBP9.75□□□□□ -0.85
PNKP-223ENST00000629179 PTH2Q96A98 100 aa9.75□□□□□ -0.85
PNKP-223ENST00000629179 TRAV1-1A0A0B4J248 108 aa9.74□□□□□ -0.85
PNKP-223ENST00000629179 H3BVH4 76 aa9.74□□□□□ -0.85
PNKP-223ENST00000629179 NXPH4O95158 308 aa9.74□□□□□ -0.85
PNKP-223ENST00000629179 ZNF575Q86XF7 245 aa9.74□□□□□ -0.85
PNKP-223ENST00000629179 GNG13Q9P2W3 67 aa9.74□□□□□ -0.85
PNKP-223ENST00000629179 DNAH2Q9P225 4427 aa9.74□□□□□ -0.85
PNKP-223ENST00000629179 TMSB15BA0A087X1C1 80 aa9.73□□□□□ -0.85
PNKP-223ENST00000629179 SIVA1O15304 175 aa9.73□□□□□ -0.85
PNKP-223ENST00000629179 S100A9P06702 114 aaKnown RBP9.73□□□□□ -0.85
PNKP-223ENST00000629179 TTC32Q5I0X7 151 aa9.73□□□□□ -0.85
PNKP-223ENST00000629179 DNLZQ5SXM8 178 aa9.73□□□□□ -0.85
PNKP-223ENST00000629179 BAGE2Q86Y30 109 aa9.73□□□□□ -0.85
PNKP-223ENST00000629179 SLC25A29Q8N8R3 303 aa9.73□□□□□ -0.85
PNKP-223ENST00000629179 JPT2Q9H910 190 aa9.73□□□□□ -0.85
PNKP-223ENST00000629179 IL36BQ9NZH7 164 aa9.73□□□□□ -0.85
PNKP-223ENST00000629179 CIDEAO60543 219 aa9.72□□□□□ -0.85
PNKP-223ENST00000629179 ARMS2P0C7Q2 107 aa9.72□□□□□ -0.85
PNKP-223ENST00000629179 TNP2Q05952 138 aa9.72□□□□□ -0.85
PNKP-223ENST00000629179 LINC01559Q495D7 138 aa9.72□□□□□ -0.85
PNKP-223ENST00000629179 C9orf62Q8N4C0 152 aa9.72□□□□□ -0.85
PNKP-223ENST00000629179 TXNDC17Q9BRA2 123 aa9.72□□□□□ -0.85
PNKP-223ENST00000629179 MANBALQ9NQG1 85 aa9.72□□□□□ -0.85
PNKP-223ENST00000629179 FAT2Q9NYQ8 4349 aa9.72□□□□□ -0.85
PNKP-223ENST00000629179 HECTD4Q9Y4D8 3996 aa9.72□□□□□ -0.85
PNKP-223ENST00000629179 A0A1W2PPQ1 181 aa9.71□□□□□ -0.86
PNKP-223ENST00000629179 DMRTA1Q5VZB9 504 aa9.71□□□□□ -0.86
PNKP-223ENST00000629179 Q6ZSN1 163 aa9.71□□□□□ -0.86
PNKP-223ENST00000629179 MLST8Q9BVC4 326 aa9.71□□□□□ -0.86
PNKP-223ENST00000629179 PARLQ9H300 379 aa9.71□□□□□ -0.86
PNKP-223ENST00000629179 TRBV6-4A0A1B0GX49 114 aa9.7□□□□□ -0.86
PNKP-223ENST00000629179 A8MWV9 139 aa9.7□□□□□ -0.86
PNKP-223ENST00000629179 TEX46H3BTG2 121 aa9.7□□□□□ -0.86
PNKP-223ENST00000629179 RPL35P42766 123 aaKnown RBP9.7□□□□□ -0.86
PNKP-223ENST00000629179 PIK3CD-AS1Q5SR53 167 aa9.7□□□□□ -0.86
PNKP-223ENST00000629179 PRADC1Q9BSG0 188 aa9.7□□□□□ -0.86
PNKP-223ENST00000629179 DERL1Q9BUN8 251 aa9.7□□□□□ -0.86
PNKP-223ENST00000629179 SAMD10Q9BYL1 202 aa9.7□□□□□ -0.86
PNKP-223ENST00000629179 RPL19P84098 196 aaKnown RBP9.69□□□□□ -0.86
PNKP-223ENST00000629179 RHOHQ15669 191 aa9.69□□□□□ -0.86
PNKP-223ENST00000629179 SH2D6Q7Z4S9 175 aa9.69□□□□□ -0.86
PNKP-223ENST00000629179 WFDC10BQ8IUB3 73 aa9.69□□□□□ -0.86
PNKP-223ENST00000629179 C11orf52Q96A22 123 aa9.69□□□□□ -0.86
PNKP-223ENST00000629179 SCRT2Q9NQ03 307 aa9.69□□□□□ -0.86
PNKP-223ENST00000629179 PHLDA3Q9Y5J5 127 aa9.69□□□□□ -0.86
PNKP-223ENST00000629179 MGST1P10620 155 aaKnown RBP9.68□□□□□ -0.86
PNKP-223ENST00000629179 PRR27Q6MZM9 219 aa9.68□□□□□ -0.86
PNKP-223ENST00000629179 UFSP1Q6NVU6 142 aa9.68□□□□□ -0.86
PNKP-223ENST00000629179 ZFP2Q6ZN57 461 aa9.68□□□□□ -0.86
PNKP-223ENST00000629179 SYT8Q8NBV8 401 aa9.68□□□□□ -0.86
PNKP-223ENST00000629179 RAB19A4D1S5 217 aa9.67□□□□□ -0.86
PNKP-223ENST00000629179 M0R381 172 aa9.67□□□□□ -0.86
PNKP-223ENST00000629179 LINC00315P59091 139 aa9.67□□□□□ -0.86
PNKP-223ENST00000629179 MEF2BQ02080 365 aaPredicted RBP9.67□□□□□ -0.86
PNKP-223ENST00000629179 ALKAL2Q6UX46 152 aa9.67□□□□□ -0.86
PNKP-223ENST00000629179 Q9UF83 564 aa9.67□□□□□ -0.86
PNKP-223ENST00000629179 TNFRSF18Q9Y5U5 241 aa9.67□□□□□ -0.86
PNKP-223ENST00000629179 LY96Q9Y6Y9 160 aa9.67□□□□□ -0.86
PNKP-223ENST00000629179 PKD1P98161 4303 aa9.66□□□□□ -0.86
PNKP-223ENST00000629179 A0A087WWL8 130 aa9.66□□□□□ -0.86
PNKP-223ENST00000629179 IFNA1P01562 189 aa9.66□□□□□ -0.86
PNKP-223ENST00000629179 BCL2P10415 239 aa9.66□□□□□ -0.86
PNKP-223ENST00000629179 NKX2-5P52952 324 aaPredicted RBP9.66□□□□□ -0.86
PNKP-223ENST00000629179 TIRAPP58753 221 aa9.66□□□□□ -0.86
PNKP-223ENST00000629179 NDUFA5Q16718 116 aa9.66□□□□□ -0.86
PNKP-223ENST00000629179 CENPWQ5EE01 88 aa9.66□□□□□ -0.86
PNKP-223ENST00000629179 FAM74A4Q5TZK3 123 aa9.66□□□□□ -0.86
PNKP-223ENST00000629179 C14orf178Q8N769 122 aaPredicted RBP9.66□□□□□ -0.86
PNKP-223ENST00000629179 SFRP2Q96HF1 295 aa9.66□□□□□ -0.86
PNKP-223ENST00000629179 IGLV2-8P01709 118 aa9.65□□□□□ -0.86
PNKP-223ENST00000629179 CRYGDP07320 174 aa9.65□□□□□ -0.86
PNKP-223ENST00000629179 ZFP82Q8N141 532 aa9.65□□□□□ -0.86
PNKP-223ENST00000629179 ATP6V0E2Q8NHE4 81 aa9.65□□□□□ -0.86
PNKP-223ENST00000629179 FAM210AQ96ND0 272 aa9.65□□□□□ -0.86
PNKP-223ENST00000629179 MED9Q9NWA0 146 aa9.65□□□□□ -0.86
PNKP-223ENST00000629179 VAX2Q9UIW0 290 aa9.65□□□□□ -0.86
PNKP-223ENST00000629179 PKHD1P08F94 4074 aa9.65□□□□□ -0.87
PNKP-223ENST00000629179 TRAV9-2A0A087WT02 112 aa9.64□□□□□ -0.87
PNKP-223ENST00000629179 MUC21A0A0G2JKD1 596 aa9.64□□□□□ -0.87
PNKP-223ENST00000629179 MUC21A0A140T8X8 626 aa9.64□□□□□ -0.87
PNKP-223ENST00000629179 GAGE12JA6NER3 117 aa9.64□□□□□ -0.87
PNKP-223ENST00000629179 RHODO00212 210 aa9.64□□□□□ -0.87
PNKP-223ENST00000629179 PDE6DO43924 150 aa9.64□□□□□ -0.87
PNKP-223ENST00000629179 CXCL1P09341 107 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms