RNA–Protein interactions for RNA: ENST00000626299.2

SOX2-OT-238, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 622 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-238ENST00000626299 H3BVH4 76 aa9.44□□□□□ -0.9
SOX2-OT-238ENST00000626299 RPL19P84098 196 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-238ENST00000626299 TEX261Q6UWH6 196 aa9.44□□□□□ -0.9
SOX2-OT-238ENST00000626299 UBE2DNLQ8IWF7 75 aa9.44□□□□□ -0.9
SOX2-OT-238ENST00000626299 OR4C5Q8NGB2 326 aa9.44□□□□□ -0.9
SOX2-OT-238ENST00000626299 PTH2Q96A98 100 aa9.44□□□□□ -0.9
SOX2-OT-238ENST00000626299 IL36BQ9NZH7 164 aa9.44□□□□□ -0.9
SOX2-OT-238ENST00000626299 KMT2AQ03164 3969 aa9.44□□□□□ -0.9
SOX2-OT-238ENST00000626299 VPS13DQ5THJ4 4388 aa9.44□□□□□ -0.9
SOX2-OT-238ENST00000626299 TRGV4A0A0C4DH28 118 aa9.43□□□□□ -0.9
SOX2-OT-238ENST00000626299 PAX4O43316 350 aa9.43□□□□□ -0.9
SOX2-OT-238ENST00000626299 GNG4P50150 75 aa9.43□□□□□ -0.9
SOX2-OT-238ENST00000626299 CRYBA4P53673 196 aa9.43□□□□□ -0.9
SOX2-OT-238ENST00000626299 RNF212Q495C1 297 aa9.43□□□□□ -0.9
SOX2-OT-238ENST00000626299 PRO0255Q9UI72 69 aa9.43□□□□□ -0.9
SOX2-OT-238ENST00000626299 HHLA3Q9XRX5 114 aa9.43□□□□□ -0.9
SOX2-OT-238ENST00000626299 A0A096LPF7 62 aa9.42□□□□□ -0.9
SOX2-OT-238ENST00000626299 RS1O15537 224 aa9.42□□□□□ -0.9
SOX2-OT-238ENST00000626299 ARMS2P0C7Q2 107 aa9.42□□□□□ -0.9
SOX2-OT-238ENST00000626299 MGST1P10620 155 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-238ENST00000626299 SLAQ13239 276 aa9.42□□□□□ -0.9
SOX2-OT-238ENST00000626299 TOR2AQ5JU69 321 aa9.42□□□□□ -0.9
SOX2-OT-238ENST00000626299 CFAP126Q5VTH2 177 aa9.42□□□□□ -0.9
SOX2-OT-238ENST00000626299 PCNPQ8WW12 178 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-238ENST00000626299 SCRT2Q9NQ03 307 aa9.42□□□□□ -0.9
SOX2-OT-238ENST00000626299 LINC00588Q9Y4M8 146 aa9.42□□□□□ -0.9
SOX2-OT-238ENST00000626299 A6NJY4 79 aa9.41□□□□□ -0.9
SOX2-OT-238ENST00000626299 SMIM12Q96EX1 92 aa9.41□□□□□ -0.9
SOX2-OT-238ENST00000626299 FAM210AQ96ND0 272 aa9.41□□□□□ -0.9
SOX2-OT-238ENST00000626299 C19orf71A6NCJ1 209 aa9.4□□□□□ -0.9
SOX2-OT-238ENST00000626299 TMEM250H0YL14 139 aa9.4□□□□□ -0.9
SOX2-OT-238ENST00000626299 GATA1P15976 413 aaPredicted RBP9.4□□□□□ -0.9
SOX2-OT-238ENST00000626299 PIK3CD-AS1Q5SR53 167 aa9.4□□□□□ -0.9
SOX2-OT-238ENST00000626299 PARLQ9H300 379 aa9.4□□□□□ -0.9
SOX2-OT-238ENST00000626299 JPT2Q9H910 190 aa9.4□□□□□ -0.9
SOX2-OT-238ENST00000626299 ICOSQ9Y6W8 199 aa9.4□□□□□ -0.9
SOX2-OT-238ENST00000626299 IGHV3-73A0A0B4J1V6 119 aa9.39□□□□□ -0.91
SOX2-OT-238ENST00000626299 CXCL1P09341 107 aa9.39□□□□□ -0.91
SOX2-OT-238ENST00000626299 CCL18P55774 89 aa9.39□□□□□ -0.91
SOX2-OT-238ENST00000626299 FAM3BP58499 235 aaPredicted RBP9.39□□□□□ -0.91
SOX2-OT-238ENST00000626299 ESRGQ1W209 222 aa9.39□□□□□ -0.91
SOX2-OT-238ENST00000626299 ZNRF2Q8NHG8 242 aa9.39□□□□□ -0.91
SOX2-OT-238ENST00000626299 EIF5A2Q9GZV4 153 aaKnown RBP9.39□□□□□ -0.91
SOX2-OT-238ENST00000626299 IGLV2-18A0A075B6J9 118 aa9.38□□□□□ -0.91
SOX2-OT-238ENST00000626299 LOC100131303A0A0U1RQF7 123 aa9.38□□□□□ -0.91
SOX2-OT-238ENST00000626299 K7EN84 100 aa9.38□□□□□ -0.91
SOX2-OT-238ENST00000626299 K7EQD1 137 aa9.38□□□□□ -0.91
SOX2-OT-238ENST00000626299 M0R381 172 aa9.38□□□□□ -0.91
SOX2-OT-238ENST00000626299 MED14OSP0DP75 135 aa9.38□□□□□ -0.91
SOX2-OT-238ENST00000626299 GYPEP15421 78 aa9.38□□□□□ -0.91
SOX2-OT-238ENST00000626299 UFSP1Q6NVU6 142 aa9.38□□□□□ -0.91
SOX2-OT-238ENST00000626299 SAMD10Q9BYL1 202 aa9.38□□□□□ -0.91
SOX2-OT-238ENST00000626299 PHLDA3Q9Y5J5 127 aa9.38□□□□□ -0.91
SOX2-OT-238ENST00000626299 A8MWV9 139 aa9.37□□□□□ -0.91
SOX2-OT-238ENST00000626299 M0R2N4 97 aa9.37□□□□□ -0.91
SOX2-OT-238ENST00000626299 SNAI2O43623 268 aa9.37□□□□□ -0.91
SOX2-OT-238ENST00000626299 CIDEAO60543 219 aa9.37□□□□□ -0.91
SOX2-OT-238ENST00000626299 CEBPGP53567 150 aa9.37□□□□□ -0.91
SOX2-OT-238ENST00000626299 MRPL23Q16540 153 aaKnown RBP9.37□□□□□ -0.91
SOX2-OT-238ENST00000626299 SLC25A29Q8N8R3 303 aa9.37□□□□□ -0.91
SOX2-OT-238ENST00000626299 SYT8Q8NBV8 401 aa9.37□□□□□ -0.91
SOX2-OT-238ENST00000626299 DAZAP1Q96EP5 407 aaKnown RBP9.37□□□□□ -0.91
SOX2-OT-238ENST00000626299 SSBP4Q9BWG4 385 aaPredicted RBP9.37□□□□□ -0.91
SOX2-OT-238ENST00000626299 NDUFS6O75380 124 aaKnown RBP9.36□□□□□ -0.91
SOX2-OT-238ENST00000626299 NXPH4O95158 308 aa9.36□□□□□ -0.91
SOX2-OT-238ENST00000626299 SRP19P09132 144 aaKnown RBP9.36□□□□□ -0.91
SOX2-OT-238ENST00000626299 OR5AL1P0C617 328 aa9.36□□□□□ -0.91
SOX2-OT-238ENST00000626299 GZMBP10144 247 aa9.36□□□□□ -0.91
SOX2-OT-238ENST00000626299 ZFP2Q6ZN57 461 aa9.36□□□□□ -0.91
SOX2-OT-238ENST00000626299 Q6ZR54 194 aa9.36□□□□□ -0.91
SOX2-OT-238ENST00000626299 Q6ZSN1 163 aa9.36□□□□□ -0.91
SOX2-OT-238ENST00000626299 ZFP82Q8N141 532 aa9.36□□□□□ -0.91
SOX2-OT-238ENST00000626299 OR2D3Q8NGH3 330 aa9.36□□□□□ -0.91
SOX2-OT-238ENST00000626299 OR10AG1Q8NH19 301 aa9.36□□□□□ -0.91
SOX2-OT-238ENST00000626299 OCC1Q8TAD7 63 aa9.36□□□□□ -0.91
SOX2-OT-238ENST00000626299 BIN3Q9NQY0 253 aa9.36□□□□□ -0.91
SOX2-OT-238ENST00000626299 MRPS16Q9Y3D3 137 aaKnown RBP9.36□□□□□ -0.91
SOX2-OT-238ENST00000626299 MUC4Q99102 2169 aa9.36□□□□□ -0.91
SOX2-OT-238ENST00000626299 DNAH6Q9C0G6 4158 aa9.35□□□□□ -0.91
SOX2-OT-238ENST00000626299 MUC21A0A0G2JKD1 596 aa9.35□□□□□ -0.91
SOX2-OT-238ENST00000626299 MUC21A0A140T8X8 626 aa9.35□□□□□ -0.91
SOX2-OT-238ENST00000626299 TRBV6-4A0A1B0GX49 114 aa9.35□□□□□ -0.91
SOX2-OT-238ENST00000626299 P01737 135 aa9.35□□□□□ -0.91
SOX2-OT-238ENST00000626299 SRIP30626 198 aa9.35□□□□□ -0.91
SOX2-OT-238ENST00000626299 NEGR1Q7Z3B1 354 aa9.35□□□□□ -0.91
SOX2-OT-238ENST00000626299 SFRP2Q96HF1 295 aa9.35□□□□□ -0.91
SOX2-OT-238ENST00000626299 UPK3BQ9BT76 320 aa9.35□□□□□ -0.91
SOX2-OT-238ENST00000626299 A0A087WWL8 130 aa9.34□□□□□ -0.91
SOX2-OT-238ENST00000626299 C9JQL5 133 aa9.34□□□□□ -0.91
SOX2-OT-238ENST00000626299 CRYGDP07320 174 aa9.34□□□□□ -0.91
SOX2-OT-238ENST00000626299 IGLC6P0CF74 106 aa9.34□□□□□ -0.91
SOX2-OT-238ENST00000626299 RPS20P60866 119 aaKnown RBP9.34□□□□□ -0.91
SOX2-OT-238ENST00000626299 SRSF3P84103 164 aaKnown RBP9.34□□□□□ -0.91
SOX2-OT-238ENST00000626299 RHOHQ15669 191 aa9.34□□□□□ -0.91
SOX2-OT-238ENST00000626299 LYPD5Q6UWN5 251 aa9.34□□□□□ -0.91
SOX2-OT-238ENST00000626299 NUDT10Q8NFP7 164 aa9.34□□□□□ -0.91
SOX2-OT-238ENST00000626299 NUDT11Q96G61 164 aa9.34□□□□□ -0.91
SOX2-OT-238ENST00000626299 RNASE7Q9H1E1 156 aaKnown RBP9.34□□□□□ -0.91
SOX2-OT-238ENST00000626299 RHODO00212 210 aa9.33□□□□□ -0.92
SOX2-OT-238ENST00000626299 FAM74A4Q5TZK3 123 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms