RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 LY6G6DO95868 133 aa13.42□□□□□ -0.26
PCF11-207ENST00000624931 IGHG2P01859 326 aa13.42□□□□□ -0.26
PCF11-207ENST00000624931 TMEM78Q5T7P6 136 aa13.42□□□□□ -0.26
PCF11-207ENST00000624931 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.42□□□□□ -0.26
PCF11-207ENST00000624931 ATP6V0BQ99437 205 aa13.42□□□□□ -0.26
PCF11-207ENST00000624931 LENEPQ9Y5L5 61 aa13.42□□□□□ -0.26
PCF11-207ENST00000624931 F8W1H4 67 aa13.41□□□□□ -0.26
PCF11-207ENST00000624931 J3QR89 54 aa13.41□□□□□ -0.26
PCF11-207ENST00000624931 FXYD2P54710 66 aa13.41□□□□□ -0.26
PCF11-207ENST00000624931 ZC2HC1BQ5TFG8 222 aa13.41□□□□□ -0.26
PCF11-207ENST00000624931 ZFAND3Q9H8U3 227 aa13.41□□□□□ -0.26
PCF11-207ENST00000624931 IGKV2D-26A0A0A0MRZ7 120 aa13.4□□□□□ -0.26
PCF11-207ENST00000624931 SCGB1A1P11684 91 aa13.4□□□□□ -0.26
PCF11-207ENST00000624931 WFDC3Q8IUB2 231 aa13.4□□□□□ -0.26
PCF11-207ENST00000624931 PHLDA1Q8WV24 401 aaPredicted RBP13.4□□□□□ -0.26
PCF11-207ENST00000624931 FLNBO75369 2602 aaKnown RBP13.39□□□□□ -0.27
PCF11-207ENST00000624931 IGKV3D-20A0A0C4DH25 116 aa13.39□□□□□ -0.27
PCF11-207ENST00000624931 E9PLD3 99 aa13.39□□□□□ -0.27
PCF11-207ENST00000624931 HLA-DMBP28068 263 aa13.39□□□□□ -0.27
PCF11-207ENST00000624931 CRIP2P52943 208 aaPredicted RBP13.39□□□□□ -0.27
PCF11-207ENST00000624931 ERCC8Q13216 396 aa13.39□□□□□ -0.27
PCF11-207ENST00000624931 C9orf47Q6ZRZ4 202 aa13.39□□□□□ -0.27
PCF11-207ENST00000624931 GTSCR1Q86UQ5 136 aa13.39□□□□□ -0.27
PCF11-207ENST00000624931 TEX29Q8N6K0 151 aa13.39□□□□□ -0.27
PCF11-207ENST00000624931 NRACQ8N912 160 aa13.39□□□□□ -0.27
PCF11-207ENST00000624931 TRBV7-1A0A0A6YYK4 115 aa13.38□□□□□ -0.27
PCF11-207ENST00000624931 TMEM238C9JI98 176 aa13.38□□□□□ -0.27
PCF11-207ENST00000624931 IGF1P05019 195 aa13.38□□□□□ -0.27
PCF11-207ENST00000624931 PRB4P10163 310 aaPredicted RBP13.38□□□□□ -0.27
PCF11-207ENST00000624931 RIPPLY3P57055 190 aa13.38□□□□□ -0.27
PCF11-207ENST00000624931 TCTAP57738 103 aa13.38□□□□□ -0.27
PCF11-207ENST00000624931 EEF1AKMT3Q96AZ1 226 aa13.38□□□□□ -0.27
PCF11-207ENST00000624931 METTL26Q96S19 204 aa13.38□□□□□ -0.27
PCF11-207ENST00000624931 NAA38Q9BRA0 125 aaKnown RBP13.38□□□□□ -0.27
PCF11-207ENST00000624931 AGPAT4-IT1Q9H0P7 198 aa13.38□□□□□ -0.27
PCF11-207ENST00000624931 PRAC2D3DTV9 90 aa13.37□□□□□ -0.27
PCF11-207ENST00000624931 ORMDL2Q53FV1 153 aa13.37□□□□□ -0.27
PCF11-207ENST00000624931 ESM1Q9NQ30 184 aa13.37□□□□□ -0.27
PCF11-207ENST00000624931 TMEM160Q9NX00 188 aa13.37□□□□□ -0.27
PCF11-207ENST00000624931 DNAJC9-AS1A6NH13 148 aa13.36□□□□□ -0.27
PCF11-207ENST00000624931 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.36□□□□□ -0.27
PCF11-207ENST00000624931 H7C1H1 209 aa13.36□□□□□ -0.27
PCF11-207ENST00000624931 C15orf32Q32M92 178 aa13.36□□□□□ -0.27
PCF11-207ENST00000624931 IGFL4Q6B9Z1 124 aa13.36□□□□□ -0.27
PCF11-207ENST00000624931 FOXI2Q6ZQN5 318 aa13.36□□□□□ -0.27
PCF11-207ENST00000624931 LCNL1Q6ZST4 164 aa13.36□□□□□ -0.27
PCF11-207ENST00000624931 ZNF702PQ9H963 129 aa13.36□□□□□ -0.27
PCF11-207ENST00000624931 IGHV7-4-1A0A0J9YVY3 117 aa13.36□□□□□ -0.27
PCF11-207ENST00000624931 IGLL5B9A064 214 aa13.36□□□□□ -0.27
PCF11-207ENST00000624931 CLEC3BP05452 202 aa13.36□□□□□ -0.27
PCF11-207ENST00000624931 C10orf99Q6UWK7 81 aa13.36□□□□□ -0.27
PCF11-207ENST00000624931 C20orf78Q9BR46 151 aa13.36□□□□□ -0.27
PCF11-207ENST00000624931 NHP2Q9NX24 153 aaKnown RBP13.36□□□□□ -0.27
PCF11-207ENST00000624931 MRPL35Q9NZE8 188 aaKnown RBP13.36□□□□□ -0.27
PCF11-207ENST00000624931 MTORP42345 2549 aa13.35□□□□□ -0.27
PCF11-207ENST00000624931 PPIFP30405 207 aaKnown RBP13.35□□□□□ -0.27
PCF11-207ENST00000624931 SPANXN1Q5VSR9 72 aa13.35□□□□□ -0.27
PCF11-207ENST00000624931 U3KQE9 123 aa13.35□□□□□ -0.27
PCF11-207ENST00000624931 LINC01549A6NIU2 74 aa13.34□□□□□ -0.27
PCF11-207ENST00000624931 F8VRH5 84 aa13.34□□□□□ -0.27
PCF11-207ENST00000624931 GAS8-AS1O95177 125 aa13.34□□□□□ -0.27
PCF11-207ENST00000624931 PPP1R17O96001 155 aa13.34□□□□□ -0.27
PCF11-207ENST00000624931 GATA1P15976 413 aaPredicted RBP13.34□□□□□ -0.27
PCF11-207ENST00000624931 RPL24P83731 157 aaKnown RBP13.34□□□□□ -0.27
PCF11-207ENST00000624931 CYSRT1A8MQ03 144 aa13.33□□□□□ -0.27
PCF11-207ENST00000624931 TRGV3P03979 118 aa13.33□□□□□ -0.27
PCF11-207ENST00000624931 CFHR3Q02985 330 aa13.33□□□□□ -0.27
PCF11-207ENST00000624931 C12orf74Q32Q52 190 aa13.33□□□□□ -0.27
PCF11-207ENST00000624931 TM4SF20Q53R12 229 aa13.33□□□□□ -0.27
PCF11-207ENST00000624931 ZNF479Q96JC4 524 aa13.33□□□□□ -0.27
PCF11-207ENST00000624931 SMIM2Q9BVW6 85 aa13.33□□□□□ -0.27
PCF11-207ENST00000624931 KLK15Q9H2R5 256 aa13.33□□□□□ -0.27
PCF11-207ENST00000624931 A0A1B0GWB2 263 aa13.33□□□□□ -0.28
PCF11-207ENST00000624931 CLPSL1A2RUU4 121 aa13.33□□□□□ -0.28
PCF11-207ENST00000624931 MED14OSP0DP75 135 aa13.33□□□□□ -0.28
PCF11-207ENST00000624931 CCDC140Q96MF4 163 aa13.33□□□□□ -0.28
PCF11-207ENST00000624931 TRAV8-2A0A0B4J237 113 aa13.32□□□□□ -0.28
PCF11-207ENST00000624931 PF4V1P10720 104 aa13.32□□□□□ -0.28
PCF11-207ENST00000624931 SRD5A1P18405 259 aa13.32□□□□□ -0.28
PCF11-207ENST00000624931 RNF182Q8N6D2 247 aa13.32□□□□□ -0.28
PCF11-207ENST00000624931 LINC00477Q96M19 166 aa13.32□□□□□ -0.28
PCF11-207ENST00000624931 HIST1H4GQ99525 98 aa13.32□□□□□ -0.28
PCF11-207ENST00000624931 C11orf21Q9P2W6 132 aa13.32□□□□□ -0.28
PCF11-207ENST00000624931 UFC1Q9Y3C8 167 aa13.32□□□□□ -0.28
PCF11-207ENST00000624931 M0R381 172 aa13.31□□□□□ -0.28
PCF11-207ENST00000624931 C8orf86Q6ZUL3 223 aa13.31□□□□□ -0.28
PCF11-207ENST00000624931 TMEM86BQ8N661 226 aa13.31□□□□□ -0.28
PCF11-207ENST00000624931 TOMM6Q96B49 74 aa13.31□□□□□ -0.28
PCF11-207ENST00000624931 HIVEP2P31629 2446 aa13.31□□□□□ -0.28
PCF11-207ENST00000624931 IGHV3-35A0A0C4DH35 117 aa13.3□□□□□ -0.28
PCF11-207ENST00000624931 MYMXA0A1B0GTQ4 84 aa13.3□□□□□ -0.28
PCF11-207ENST00000624931 OR11H12B2RN74 326 aa13.3□□□□□ -0.28
PCF11-207ENST00000624931 INAFM1C9JVW0 142 aa13.3□□□□□ -0.28
PCF11-207ENST00000624931 SAMD13Q5VXD3 122 aa13.3□□□□□ -0.28
PCF11-207ENST00000624931 CLEC19AQ6UXS0 136 aa13.3□□□□□ -0.28
PCF11-207ENST00000624931 OR11H1Q8NG94 326 aa13.3□□□□□ -0.28
PCF11-207ENST00000624931 OR11H2Q8NH07 326 aa13.3□□□□□ -0.28
PCF11-207ENST00000624931 SIGMAR1Q99720 223 aa13.3□□□□□ -0.28
PCF11-207ENST00000624931 CHTOPQ9Y3Y2 248 aaKnown RBP13.3□□□□□ -0.28
PCF11-207ENST00000624931 HIVEP1P15822 2718 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms