RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 TRBV20-1A0A075B6N2 111 aa4.97□□□□□ -1.61
CDKL5-205ENST00000623535 HS3ST6Q96QI5 342 aa4.97□□□□□ -1.61
CDKL5-205ENST00000623535 KAAG1Q9UBP8 84 aa4.97□□□□□ -1.61
CDKL5-205ENST00000623535 IGKV1-27A0A075B6S5 117 aa4.97□□□□□ -1.61
CDKL5-205ENST00000623535 FXYD1O00168 92 aa4.97□□□□□ -1.61
CDKL5-205ENST00000623535 SIVA1O15304 175 aa4.97□□□□□ -1.61
CDKL5-205ENST00000623535 FAM104BQ5XKR9 115 aa4.97□□□□□ -1.61
CDKL5-205ENST00000623535 FAM19A1Q7Z5A9 133 aa4.97□□□□□ -1.61
CDKL5-205ENST00000623535 WNK3Q9BYP7 1800 aa4.97□□□□□ -1.61
CDKL5-205ENST00000623535 TRBV7-3A0A075B6L6 115 aa4.97□□□□□ -1.61
CDKL5-205ENST00000623535 IGKV1-12A0A0C4DH73 117 aa4.97□□□□□ -1.61
CDKL5-205ENST00000623535 CENPVL1A0A0U1RR11 272 aa4.97□□□□□ -1.61
CDKL5-205ENST00000623535 HIVEP3Q5T1R4 2406 aa4.97□□□□□ -1.61
CDKL5-205ENST00000623535 IGHV4-61A0A0C4DH41 118 aa4.97□□□□□ -1.61
CDKL5-205ENST00000623535 LY6G6DO95868 133 aa4.97□□□□□ -1.61
CDKL5-205ENST00000623535 LINC00311Q8N616 119 aa4.97□□□□□ -1.61
CDKL5-205ENST00000623535 LINC00482Q8N8I6 264 aa4.97□□□□□ -1.61
CDKL5-205ENST00000623535 FN1P02751 2386 aaKnown RBP4.97□□□□□ -1.61
CDKL5-205ENST00000623535 IGHG2P01859 326 aa4.96□□□□□ -1.61
CDKL5-205ENST00000623535 PLXNB1O43157 2135 aa4.96□□□□□ -1.61
CDKL5-205ENST00000623535 TRAV12-1A0A0B4J245 112 aa4.96□□□□□ -1.62
CDKL5-205ENST00000623535 A0A1B0GTL3 188 aa4.96□□□□□ -1.62
CDKL5-205ENST00000623535 SRP19P09132 144 aaKnown RBP4.96□□□□□ -1.62
CDKL5-205ENST00000623535 C10orf55Q5SWW7 151 aa4.96□□□□□ -1.62
CDKL5-205ENST00000623535 PNRC2Q9NPJ4 139 aaKnown RBP4.96□□□□□ -1.62
CDKL5-205ENST00000623535 GREB1LQ9C091 1923 aaPredicted RBP4.96□□□□□ -1.62
CDKL5-205ENST00000623535 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.96□□□□□ -1.62
CDKL5-205ENST00000623535 EDN2P20800 178 aa4.96□□□□□ -1.62
CDKL5-205ENST00000623535 APRG1Q8IVJ8 170 aa4.96□□□□□ -1.62
CDKL5-205ENST00000623535 TRBV10-2A0A0K0K1G8 114 aa4.96□□□□□ -1.62
CDKL5-205ENST00000623535 SNAI2O43623 268 aa4.96□□□□□ -1.62
CDKL5-205ENST00000623535 MED14OSP0DP75 135 aa4.96□□□□□ -1.62
CDKL5-205ENST00000623535 NDUFS7O75251 213 aa4.96□□□□□ -1.62
CDKL5-205ENST00000623535 KIAA1671Q9BY89 1806 aa4.96□□□□□ -1.62
CDKL5-205ENST00000623535 RPL28P46779 137 aaKnown RBP4.96□□□□□ -1.62
CDKL5-205ENST00000623535 A4D1N5 150 aa4.95□□□□□ -1.62
CDKL5-205ENST00000623535 H3BUT2 72 aa4.95□□□□□ -1.62
CDKL5-205ENST00000623535 K7EM74 188 aa4.95□□□□□ -1.62
CDKL5-205ENST00000623535 IGHV2-70P01814 119 aa4.95□□□□□ -1.62
CDKL5-205ENST00000623535 CRYGBP07316 175 aa4.95□□□□□ -1.62
CDKL5-205ENST00000623535 ZNF664Q8N3J9 261 aa4.95□□□□□ -1.62
CDKL5-205ENST00000623535 F8P00451 2351 aa4.95□□□□□ -1.62
CDKL5-205ENST00000623535 AGMATQ9BSE5 352 aa4.95□□□□□ -1.62
CDKL5-205ENST00000623535 REG3GQ6UW15 175 aa4.95□□□□□ -1.62
CDKL5-205ENST00000623535 C2orf66Q6UXQ4 117 aa4.95□□□□□ -1.62
CDKL5-205ENST00000623535 SMIM20Q8N5G0 67 aa4.95□□□□□ -1.62
CDKL5-205ENST00000623535 PRSS47A8MTI9 375 aa4.95□□□□□ -1.62
CDKL5-205ENST00000623535 PUSL1Q8N0Z8 303 aaKnown RBP4.95□□□□□ -1.62
CDKL5-205ENST00000623535 C20orf78Q9BR46 151 aa4.95□□□□□ -1.62
CDKL5-205ENST00000623535 COL24A1Q17RW2 1714 aa4.95□□□□□ -1.62
CDKL5-205ENST00000623535 C1orf134Q5TEV5 83 aa4.95□□□□□ -1.62
CDKL5-205ENST00000623535 HLA-DMBP28068 263 aa4.95□□□□□ -1.62
CDKL5-205ENST00000623535 TNRC6AQ8NDV7 1962 aaKnown RBP4.95□□□□□ -1.62
CDKL5-205ENST00000623535 PTPRFP10586 1907 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.94□□□□□ -1.62
CDKL5-205ENST00000623535 COL5A3P25940 1745 aaPredicted RBP4.94□□□□□ -1.62
CDKL5-205ENST00000623535 PRSS46E5RG02 174 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 IGLL1P15814 213 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 IGKV1D-17A0A075B6S4 117 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 RBAKDNA6NC62 111 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 UFSP1Q6NVU6 142 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 C5orf38Q86SI9 138 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 COX7B2Q8TF08 81 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 IGLV2-18A0A075B6J9 118 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 FGF23Q9GZV9 251 aaPredicted RBP4.94□□□□□ -1.62
CDKL5-205ENST00000623535 ZNF837Q96EG3 531 aaPredicted RBP4.94□□□□□ -1.62
CDKL5-205ENST00000623535 C2orf70A6NJV1 201 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 ZNF833PQ6ZTB9 187 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 PPP1R3EQ9H7J1 279 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 FAM231BA6NCW3 169 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 SYS1-DBNDD2H3BUS1 97 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 NCR3O14931 201 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 Q86TA4 180 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 LYPD6BQ8NI32 183 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 WDR83OSQ9Y284 106 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 COL11A2P13942 1736 aaPredicted RBP4.94□□□□□ -1.62
CDKL5-205ENST00000623535 H0YIZ8 118 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 IGKV1-17P01599 117 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 C14orf144Q96I85 54 aa4.94□□□□□ -1.62
CDKL5-205ENST00000623535 IGHV4-38-2P0DP08 117 aa4.93□□□□□ -1.62
CDKL5-205ENST00000623535 HGFACQ04756 655 aa4.93□□□□□ -1.62
CDKL5-205ENST00000623535 LYPD6Q86Y78 171 aa4.93□□□□□ -1.62
CDKL5-205ENST00000623535 CCDC140Q96MF4 163 aa4.93□□□□□ -1.62
CDKL5-205ENST00000623535 KLHDC3Q9BQ90 382 aa4.93□□□□□ -1.62
CDKL5-205ENST00000623535 TRAV26-1A0A087WT03 109 aa4.93□□□□□ -1.62
CDKL5-205ENST00000623535 SPINK8P0C7L1 97 aa4.93□□□□□ -1.62
CDKL5-205ENST00000623535 LIMD2Q9BT23 127 aa4.93□□□□□ -1.62
CDKL5-205ENST00000623535 Q6ZVQ6 151 aa4.93□□□□□ -1.62
CDKL5-205ENST00000623535 ANKHD1Q8IWZ3 2542 aaKnown RBP4.93□□□□□ -1.62
CDKL5-205ENST00000623535 IGHV1-58A0A0C4DH39 117 aa4.93□□□□□ -1.62
CDKL5-205ENST00000623535 A8MWP6 167 aa4.93□□□□□ -1.62
CDKL5-205ENST00000623535 K7EMT4 169 aa4.93□□□□□ -1.62
CDKL5-205ENST00000623535 COX7BP24311 80 aa4.93□□□□□ -1.62
CDKL5-205ENST00000623535 NPBQ8NG41 125 aa4.93□□□□□ -1.62
CDKL5-205ENST00000623535 IGF1P05019 195 aa4.93□□□□□ -1.62
CDKL5-205ENST00000623535 GATA1P15976 413 aaPredicted RBP4.93□□□□□ -1.62
CDKL5-205ENST00000623535 Q8N8P6 123 aa4.93□□□□□ -1.62
CDKL5-205ENST00000623535 ESM1Q9NQ30 184 aa4.93□□□□□ -1.62
CDKL5-205ENST00000623535 NPDC1Q9NQX5 325 aaPredicted RBP4.93□□□□□ -1.62
CDKL5-205ENST00000623535 ZNRD1Q9P1U0 126 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms