RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 ZNF688P0C7X2 276 aa8.98□□□□□ -0.97
TP53-227ENST00000622645 RBX1P62877 108 aa8.98□□□□□ -0.97
TP53-227ENST00000622645 MYOZ3Q8TDC0 251 aa8.98□□□□□ -0.97
TP53-227ENST00000622645 ABCA12Q86UK0 2595 aa8.97□□□□□ -0.97
TP53-227ENST00000622645 KLLNB2CW77 178 aa8.97□□□□□ -0.97
TP53-227ENST00000622645 ID1P41134 155 aa8.97□□□□□ -0.97
TP53-227ENST00000622645 SUMO2P61956 95 aaKnown RBP8.97□□□□□ -0.97
TP53-227ENST00000622645 DUX5Q96PT3 197 aa8.97□□□□□ -0.97
TP53-227ENST00000622645 MXRA5Q9NR99 2828 aa8.97□□□□□ -0.97
TP53-227ENST00000622645 TRBV7-9A0A0J9YWB2 115 aa8.97□□□□□ -0.97
TP53-227ENST00000622645 ATP5LO75964 103 aa8.97□□□□□ -0.97
TP53-227ENST00000622645 IGKV3-20P01619 116 aa8.97□□□□□ -0.97
TP53-227ENST00000622645 IGKCP01834 107 aa8.97□□□□□ -0.97
TP53-227ENST00000622645 SYNJ2BPP57105 145 aa8.97□□□□□ -0.97
TP53-227ENST00000622645 PSMG4Q5JS54 123 aa8.97□□□□□ -0.97
TP53-227ENST00000622645 TMEM160Q9NX00 188 aa8.97□□□□□ -0.97
TP53-227ENST00000622645 TRAV12-3A0A0B4J271 114 aa8.96□□□□□ -0.97
TP53-227ENST00000622645 J3QLI3 93 aa8.96□□□□□ -0.97
TP53-227ENST00000622645 GTSCR1Q86UQ5 136 aa8.96□□□□□ -0.97
TP53-227ENST00000622645 MRPL35Q9NZE8 188 aaKnown RBP8.96□□□□□ -0.97
TP53-227ENST00000622645 CREBBPQ92793 2442 aa8.96□□□□□ -0.98
TP53-227ENST00000622645 MUC4Q99102 2169 aa8.96□□□□□ -0.98
TP53-227ENST00000622645 NAV2Q8IVL1 2488 aa8.96□□□□□ -0.98
TP53-227ENST00000622645 ZC2HC1BQ5TFG8 222 aa8.96□□□□□ -0.98
TP53-227ENST00000622645 FAM159AQ6UWV7 190 aa8.96□□□□□ -0.98
TP53-227ENST00000622645 JPT2Q9H910 190 aa8.96□□□□□ -0.98
TP53-227ENST00000622645 BEX4Q9NWD9 120 aaPredicted RBP8.96□□□□□ -0.98
TP53-227ENST00000622645 VPREB3Q9UKI3 123 aa8.96□□□□□ -0.98
TP53-227ENST00000622645 SORL1Q92673 2214 aa8.96□□□□□ -0.98
TP53-227ENST00000622645 DPM2O94777 84 aa8.95□□□□□ -0.98
TP53-227ENST00000622645 ADAMTSL5Q6ZMM2 481 aa8.95□□□□□ -0.98
TP53-227ENST00000622645 OR9G4Q8NGQ1 327 aa8.95□□□□□ -0.98
TP53-227ENST00000622645 TRAV12-2A0A075B6T6 113 aa8.95□□□□□ -0.98
TP53-227ENST00000622645 MED14OSP0DP75 135 aa8.95□□□□□ -0.98
TP53-227ENST00000622645 PCP4P48539 62 aa8.95□□□□□ -0.98
TP53-227ENST00000622645 SEC11AP67812 179 aa8.95□□□□□ -0.98
TP53-227ENST00000622645 AP1S3Q96PC3 154 aa8.95□□□□□ -0.98
TP53-227ENST00000622645 IGHV4OR15-8A0A075B7B6 117 aa8.94□□□□□ -0.98
TP53-227ENST00000622645 A0A087WW49 117 aa8.94□□□□□ -0.98
TP53-227ENST00000622645 CD7P09564 240 aa8.94□□□□□ -0.98
TP53-227ENST00000622645 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.94□□□□□ -0.98
TP53-227ENST00000622645 HOXA3O43365 443 aaPredicted RBP8.94□□□□□ -0.98
TP53-227ENST00000622645 IGHV4-31P0DP07 118 aa8.94□□□□□ -0.98
TP53-227ENST00000622645 RNF151Q2KHN1 245 aa8.94□□□□□ -0.98
TP53-227ENST00000622645 Q6YL49 198 aa8.94□□□□□ -0.98
TP53-227ENST00000622645 DEFB104AQ8WTQ1 72 aa8.94□□□□□ -0.98
TP53-227ENST00000622645 C20orf78Q9BR46 151 aa8.94□□□□□ -0.98
TP53-227ENST00000622645 SIVA1O15304 175 aa8.93□□□□□ -0.98
TP53-227ENST00000622645 NEGR1Q7Z3B1 354 aa8.93□□□□□ -0.98
TP53-227ENST00000622645 ZNF843Q8N446 348 aa8.93□□□□□ -0.98
TP53-227ENST00000622645 NAA38Q9BRA0 125 aaKnown RBP8.93□□□□□ -0.98
TP53-227ENST00000622645 ZNF702PQ9H963 129 aa8.93□□□□□ -0.98
TP53-227ENST00000622645 AGRNO00468 2067 aa8.93□□□□□ -0.98
TP53-227ENST00000622645 A0A087WX48 190 aa8.93□□□□□ -0.98
TP53-227ENST00000622645 TMEM89A2RUT3 159 aa8.93□□□□□ -0.98
TP53-227ENST00000622645 LINC00315P59091 139 aa8.93□□□□□ -0.98
TP53-227ENST00000622645 HSD52Q0P140 79 aa8.93□□□□□ -0.98
TP53-227ENST00000622645 ORMDL2Q53FV1 153 aa8.93□□□□□ -0.98
TP53-227ENST00000622645 KIF25-AS1Q9Y6Z4 181 aa8.93□□□□□ -0.98
TP53-227ENST00000622645 UBR5O95071 2799 aaPredicted RBP8.93□□□□□ -0.98
TP53-227ENST00000622645 TEX15Q9BXT5 2789 aa8.92□□□□□ -0.98
TP53-227ENST00000622645 A0A087WWL8 130 aa8.92□□□□□ -0.98
TP53-227ENST00000622645 A0A0J9YX75 114 aa8.92□□□□□ -0.98
TP53-227ENST00000622645 K7EQG2 157 aa8.92□□□□□ -0.98
TP53-227ENST00000622645 FSHBP01225 129 aa8.92□□□□□ -0.98
TP53-227ENST00000622645 LGALS1P09382 135 aaKnown RBP8.92□□□□□ -0.98
TP53-227ENST00000622645 HOXD3P31249 432 aaPredicted RBP8.92□□□□□ -0.98
TP53-227ENST00000622645 SNRPD3P62318 126 aaKnown RBP8.92□□□□□ -0.98
TP53-227ENST00000622645 SAMD13Q5VXD3 122 aa8.92□□□□□ -0.98
TP53-227ENST00000622645 SCGB3A1Q96QR1 104 aa8.92□□□□□ -0.98
TP53-227ENST00000622645 CST9LQ9H4G1 147 aa8.92□□□□□ -0.98
TP53-227ENST00000622645 NXPH4O95158 308 aa8.92□□□□□ -0.98
TP53-227ENST00000622645 CSTL1Q9H114 145 aa8.92□□□□□ -0.98
TP53-227ENST00000622645 SPINK13Q1W4C9 94 aa8.91□□□□□ -0.98
TP53-227ENST00000622645 TOMM6Q96B49 74 aa8.91□□□□□ -0.98
TP53-227ENST00000622645 JMJD8Q96S16 334 aa8.91□□□□□ -0.98
TP53-227ENST00000622645 MDFICQ9P1T7 246 aa8.91□□□□□ -0.98
TP53-227ENST00000622645 ELANEP08246 267 aa8.91□□□□□ -0.98
TP53-227ENST00000622645 CDKN1BP46527 198 aa8.91□□□□□ -0.98
TP53-227ENST00000622645 DEFB136Q30KP8 78 aa8.91□□□□□ -0.98
TP53-227ENST00000622645 C2orf66Q6UXQ4 117 aa8.91□□□□□ -0.98
TP53-227ENST00000622645 C18orf65Q6ZTR6 163 aa8.91□□□□□ -0.98
TP53-227ENST00000622645 RAB37Q96AX2 223 aa8.91□□□□□ -0.98
TP53-227ENST00000622645 EPG5Q9HCE0 2579 aa8.9□□□□□ -0.98
TP53-227ENST00000622645 A6NDN8 102 aa8.9□□□□□ -0.98
TP53-227ENST00000622645 H3BRM9 83 aa8.9□□□□□ -0.98
TP53-227ENST00000622645 H3BUT2 72 aa8.9□□□□□ -0.98
TP53-227ENST00000622645 Q5PR19 223 aa8.9□□□□□ -0.98
TP53-227ENST00000622645 UBE2E2Q96LR5 201 aa8.9□□□□□ -0.98
TP53-227ENST00000622645 TRBV25-1A0A075B6N4 114 aa8.9□□□□□ -0.98
TP53-227ENST00000622645 GAGE12BA1L429 117 aa8.9□□□□□ -0.98
TP53-227ENST00000622645 C9orf118A6NHY6 69 aa8.9□□□□□ -0.98
TP53-227ENST00000622645 F5H697 171 aa8.9□□□□□ -0.98
TP53-227ENST00000622645 POM121L12Q8N7R1 296 aa8.9□□□□□ -0.98
TP53-227ENST00000622645 MAPKAPK5-AS1Q8N8E1 139 aa8.9□□□□□ -0.98
TP53-227ENST00000622645 TLN2Q9Y4G6 2542 aa8.9□□□□□ -0.99
TP53-227ENST00000622645 CR1P17927 2039 aa8.9□□□□□ -0.99
TP53-227ENST00000622645 GAGE10A6NGK3 116 aa8.89□□□□□ -0.99
TP53-227ENST00000622645 OCIAD2Q56VL3 154 aa8.89□□□□□ -0.99
TP53-227ENST00000622645 FAM74A4Q5TZK3 123 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms