RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 C7orf71A4D174 169 aa12.9□□□□□ -0.34
PCDHGC3-205ENST00000617641 M0R381 172 aa12.9□□□□□ -0.34
PCDHGC3-205ENST00000617641 GAGE1Q13065 139 aa12.9□□□□□ -0.34
PCDHGC3-205ENST00000617641 FOXI2Q6ZQN5 318 aa12.9□□□□□ -0.34
PCDHGC3-205ENST00000617641 SMIM15Q7Z3B0 74 aa12.9□□□□□ -0.34
PCDHGC3-205ENST00000617641 OTOGQ6ZRI0 2925 aa12.9□□□□□ -0.34
PCDHGC3-205ENST00000617641 DLEU1O43261 78 aa12.89□□□□□ -0.35
PCDHGC3-205ENST00000617641 LEPROTL1O95214 131 aa12.89□□□□□ -0.35
PCDHGC3-205ENST00000617641 RNASE3P12724 160 aaKnown RBP12.89□□□□□ -0.35
PCDHGC3-205ENST00000617641 GATA1P15976 413 aaPredicted RBP12.89□□□□□ -0.35
PCDHGC3-205ENST00000617641 DEFB131AP59861 70 aa12.89□□□□□ -0.35
PCDHGC3-205ENST00000617641 SPINK13Q1W4C9 94 aa12.89□□□□□ -0.35
PCDHGC3-205ENST00000617641 KNCNA6PVL3 124 aa12.89□□□□□ -0.35
PCDHGC3-205ENST00000617641 CCL24O00175 119 aa12.89□□□□□ -0.35
PCDHGC3-205ENST00000617641 DUSP14O95147 198 aaKnown RBP12.89□□□□□ -0.35
PCDHGC3-205ENST00000617641 PPBPP02775 128 aa12.89□□□□□ -0.35
PCDHGC3-205ENST00000617641 FHL3Q13643 280 aa12.89□□□□□ -0.35
PCDHGC3-205ENST00000617641 FAM159AQ6UWV7 190 aa12.89□□□□□ -0.35
PCDHGC3-205ENST00000617641 PHLDA3Q9Y5J5 127 aa12.89□□□□□ -0.35
PCDHGC3-205ENST00000617641 NOTCH2Q04721 2471 aa12.88□□□□□ -0.35
PCDHGC3-205ENST00000617641 HIVEP2P31629 2446 aa12.88□□□□□ -0.35
PCDHGC3-205ENST00000617641 DEFB114Q30KQ6 69 aa12.88□□□□□ -0.35
PCDHGC3-205ENST00000617641 SCRT2Q9NQ03 307 aa12.88□□□□□ -0.35
PCDHGC3-205ENST00000617641 TCF21O43680 179 aa12.88□□□□□ -0.35
PCDHGC3-205ENST00000617641 SPATA12Q7Z6I5 190 aa12.88□□□□□ -0.35
PCDHGC3-205ENST00000617641 PAM16Q9Y3D7 125 aa12.88□□□□□ -0.35
PCDHGC3-205ENST00000617641 TSSC4Q9Y5U2 329 aaPredicted RBP12.88□□□□□ -0.35
PCDHGC3-205ENST00000617641 CIDEAO60543 219 aa12.87□□□□□ -0.35
PCDHGC3-205ENST00000617641 MED14OSP0DP75 135 aa12.87□□□□□ -0.35
PCDHGC3-205ENST00000617641 CDKN1BP46527 198 aa12.87□□□□□ -0.35
PCDHGC3-205ENST00000617641 CD300EQ496F6 205 aaPredicted RBP12.87□□□□□ -0.35
PCDHGC3-205ENST00000617641 NDUFAF3Q9BU61 184 aa12.87□□□□□ -0.35
PCDHGC3-205ENST00000617641 VAMP8Q9BV40 100 aa12.87□□□□□ -0.35
PCDHGC3-205ENST00000617641 TRAV26-2A0A0B4J265 109 aa12.87□□□□□ -0.35
PCDHGC3-205ENST00000617641 KIR2DL5BA0A0G2JN68 375 aa12.87□□□□□ -0.35
PCDHGC3-205ENST00000617641 KIR2DL5BA0A0G2JPC4 375 aa12.87□□□□□ -0.35
PCDHGC3-205ENST00000617641 TNFRSF6BO95407 300 aa12.87□□□□□ -0.35
PCDHGC3-205ENST00000617641 AMTNQ6UX39 209 aa12.87□□□□□ -0.35
PCDHGC3-205ENST00000617641 KIR2DL5AQ8N109 375 aa12.87□□□□□ -0.35
PCDHGC3-205ENST00000617641 TMEM208Q9BTX3 173 aa12.87□□□□□ -0.35
PCDHGC3-205ENST00000617641 TRAV2A0A0B4J234 112 aa12.86□□□□□ -0.35
PCDHGC3-205ENST00000617641 TMEM70Q9BUB7 260 aa12.86□□□□□ -0.35
PCDHGC3-205ENST00000617641 MAP1LC3AQ9H492 121 aa12.86□□□□□ -0.35
PCDHGC3-205ENST00000617641 SETD2Q9BYW2 2564 aaPredicted RBP12.85□□□□□ -0.35
PCDHGC3-205ENST00000617641 CD7P09564 240 aa12.85□□□□□ -0.35
PCDHGC3-205ENST00000617641 TSPOP30536 169 aa12.85□□□□□ -0.35
PCDHGC3-205ENST00000617641 ATOH7Q8N100 152 aa12.85□□□□□ -0.35
PCDHGC3-205ENST00000617641 A0A096LNJ9 63 aa12.85□□□□□ -0.35
PCDHGC3-205ENST00000617641 EREGO14944 169 aa12.85□□□□□ -0.35
PCDHGC3-205ENST00000617641 NPSP0C0P6 89 aa12.85□□□□□ -0.35
PCDHGC3-205ENST00000617641 FXYD7P58549 80 aa12.85□□□□□ -0.35
PCDHGC3-205ENST00000617641 LAMTOR2Q9Y2Q5 125 aa12.85□□□□□ -0.35
PCDHGC3-205ENST00000617641 C14orf178Q8N769 122 aaPredicted RBP12.84□□□□□ -0.35
PCDHGC3-205ENST00000617641 OR2K2Q8NGT1 345 aa12.84□□□□□ -0.35
PCDHGC3-205ENST00000617641 MAP6D1Q9H9H5 199 aa12.84□□□□□ -0.35
PCDHGC3-205ENST00000617641 SYS1-DBNDD2H3BUS1 97 aa12.83□□□□□ -0.36
PCDHGC3-205ENST00000617641 NDUFA7O95182 113 aa12.83□□□□□ -0.36
PCDHGC3-205ENST00000617641 HLA-DRB4P13762 266 aa12.83□□□□□ -0.36
PCDHGC3-205ENST00000617641 HSPB8Q9UJY1 196 aa12.83□□□□□ -0.36
PCDHGC3-205ENST00000617641 HLA-DRB4X5D2U9 266 aa12.83□□□□□ -0.36
PCDHGC3-205ENST00000617641 WNK1Q9H4A3 2382 aa12.83□□□□□ -0.36
PCDHGC3-205ENST00000617641 MUC4Q99102 2169 aa12.83□□□□□ -0.36
PCDHGC3-205ENST00000617641 HSBP1L1C9JCN9 74 aa12.83□□□□□ -0.36
PCDHGC3-205ENST00000617641 H3BMM0 161 aa12.83□□□□□ -0.36
PCDHGC3-205ENST00000617641 NRACQ8N912 160 aa12.83□□□□□ -0.36
PCDHGC3-205ENST00000617641 RBMY1BA6NDE4 496 aaKnown RBP12.82□□□□□ -0.36
PCDHGC3-205ENST00000617641 RBMY1EA6NEQ0 496 aaKnown RBP12.82□□□□□ -0.36
PCDHGC3-205ENST00000617641 RBMY1DP0C7P1 496 aaKnown RBP12.82□□□□□ -0.36
PCDHGC3-205ENST00000617641 INAFM1C9JVW0 142 aa12.82□□□□□ -0.36
PCDHGC3-205ENST00000617641 NXPH4O95158 308 aa12.82□□□□□ -0.36
PCDHGC3-205ENST00000617641 RBX1P62877 108 aa12.82□□□□□ -0.36
PCDHGC3-205ENST00000617641 JMJD8Q96S16 334 aa12.82□□□□□ -0.36
PCDHGC3-205ENST00000617641 MAP1LC3CQ9BXW4 147 aa12.82□□□□□ -0.36
PCDHGC3-205ENST00000617641 DPH3P1Q9H4G8 78 aa12.82□□□□□ -0.36
PCDHGC3-205ENST00000617641 ZNF256Q9Y2P7 627 aaPredicted RBP12.82□□□□□ -0.36
PCDHGC3-205ENST00000617641 IGHV3-16A0A0C4DH30 117 aa12.81□□□□□ -0.36
PCDHGC3-205ENST00000617641 OR4C46A6NHA9 309 aa12.81□□□□□ -0.36
PCDHGC3-205ENST00000617641 H0Y8G0 127 aa12.81□□□□□ -0.36
PCDHGC3-205ENST00000617641 CRXO43186 299 aaPredicted RBP12.81□□□□□ -0.36
PCDHGC3-205ENST00000617641 PROK1P58294 105 aa12.81□□□□□ -0.36
PCDHGC3-205ENST00000617641 Q8N1Y9 231 aa12.81□□□□□ -0.36
PCDHGC3-205ENST00000617641 SPAG8Q99932 426 aaPredicted RBP12.81□□□□□ -0.36
PCDHGC3-205ENST00000617641 C20orf144Q9BQM9 153 aa12.81□□□□□ -0.36
PCDHGC3-205ENST00000617641 ZNF747Q9BV97 191 aa12.81□□□□□ -0.36
PCDHGC3-205ENST00000617641 MDFICQ9P1T7 246 aa12.81□□□□□ -0.36
PCDHGC3-205ENST00000617641 IGHV1OR15-1A0A075B7D0 117 aa12.8□□□□□ -0.36
PCDHGC3-205ENST00000617641 A8MTW9 85 aa12.8□□□□□ -0.36
PCDHGC3-205ENST00000617641 MRAP2Q96G30 205 aa12.8□□□□□ -0.36
PCDHGC3-205ENST00000617641 AP1S3Q96PC3 154 aa12.8□□□□□ -0.36
PCDHGC3-205ENST00000617641 MCRIP2Q9BUT9 160 aaKnown RBP12.8□□□□□ -0.36
PCDHGC3-205ENST00000617641 MGPP08493 103 aa12.8□□□□□ -0.36
PCDHGC3-205ENST00000617641 RBMY1A1P0DJD3 496 aaKnown RBP12.8□□□□□ -0.36
PCDHGC3-205ENST00000617641 RBMY1CP0DJD4 496 aa12.8□□□□□ -0.36
PCDHGC3-205ENST00000617641 RBMY1FQ15415 496 aaKnown RBP12.8□□□□□ -0.36
PCDHGC3-205ENST00000617641 SPATA45Q537H7 98 aa12.8□□□□□ -0.36
PCDHGC3-205ENST00000617641 NXT2Q9NPJ8 142 aaKnown RBP12.8□□□□□ -0.36
PCDHGC3-205ENST00000617641 ADARB2-AS1A8MUL3 147 aa12.79□□□□□ -0.36
PCDHGC3-205ENST00000617641 HBDP02042 147 aa12.79□□□□□ -0.36
PCDHGC3-205ENST00000617641 NSUN5P1Q3KNT7 163 aa12.79□□□□□ -0.36
PCDHGC3-205ENST00000617641 A6NJY4 79 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms