RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 SNAPC5O75971 98 aa2.09□□□□□ -2.07
RFC3-203ENST00000616236 TFF1P04155 84 aa2.09□□□□□ -2.07
RFC3-203ENST00000616236 IL5P05113 134 aa2.09□□□□□ -2.07
RFC3-203ENST00000616236 PIRTP0C851 137 aa2.09□□□□□ -2.07
RFC3-203ENST00000616236 MRPS10P82664 201 aaKnown RBP2.09□□□□□ -2.07
RFC3-203ENST00000616236 GDF5OSQ5U4N7 250 aa2.09□□□□□ -2.07
RFC3-203ENST00000616236 KRTAP13-1Q8IUC0 172 aa2.09□□□□□ -2.07
RFC3-203ENST00000616236 PPDPFLQ8WWR9 84 aa2.09□□□□□ -2.07
RFC3-203ENST00000616236 OBSCN-AS1Q96MR7 158 aa2.09□□□□□ -2.07
RFC3-203ENST00000616236 RERGLQ9H628 205 aa2.09□□□□□ -2.07
RFC3-203ENST00000616236 TMEM242Q9NWH2 141 aa2.09□□□□□ -2.07
RFC3-203ENST00000616236 BOKQ9UMX3 212 aaPredicted RBP2.09□□□□□ -2.07
RFC3-203ENST00000616236 CTTNBP2Q8WZ74 1663 aa2.09□□□□□ -2.08
RFC3-203ENST00000616236 CFTRP13569 1480 aa2.08□□□□□ -2.08
RFC3-203ENST00000616236 NUPR2A6NF83 97 aa2.08□□□□□ -2.08
RFC3-203ENST00000616236 SLC25A6P12236 298 aa2.08□□□□□ -2.08
RFC3-203ENST00000616236 PDE6GP18545 87 aa2.08□□□□□ -2.08
RFC3-203ENST00000616236 SPTSSAQ969W0 71 aa2.08□□□□□ -2.08
RFC3-203ENST00000616236 NAA60Q9H7X0 242 aa2.08□□□□□ -2.08
RFC3-203ENST00000616236 MRPL36Q9P0J6 103 aaKnown RBP2.08□□□□□ -2.08
RFC3-203ENST00000616236 NDUFA12Q9UI09 145 aa2.08□□□□□ -2.08
RFC3-203ENST00000616236 PHRF1Q9P1Y6 1649 aaKnown RBP2.08□□□□□ -2.08
RFC3-203ENST00000616236 IGHV3-30P01768 117 aa2.07□□□□□ -2.08
RFC3-203ENST00000616236 IGHV3-30-5P0DP03 117 aa2.07□□□□□ -2.08
RFC3-203ENST00000616236 IL9P15248 144 aa2.07□□□□□ -2.08
RFC3-203ENST00000616236 LCE3AQ5TA76 89 aa2.07□□□□□ -2.08
RFC3-203ENST00000616236 SPANXN1Q5VSR9 72 aa2.07□□□□□ -2.08
RFC3-203ENST00000616236 PLPP5Q8NEB5 264 aa2.07□□□□□ -2.08
RFC3-203ENST00000616236 LSM10Q969L4 123 aaKnown RBP2.07□□□□□ -2.08
RFC3-203ENST00000616236 TCEAL7Q9BRU2 100 aa2.07□□□□□ -2.08
RFC3-203ENST00000616236 ZGRF1Q86YA3 2104 aa2.06□□□□□ -2.08
RFC3-203ENST00000616236 BCORL1Q5H9F3 1711 aa2.06□□□□□ -2.08
RFC3-203ENST00000616236 IGKV3-7A0A075B6H7 116 aa2.06□□□□□ -2.08
RFC3-203ENST00000616236 CXorf51AA0A1B0GTR3 108 aa2.06□□□□□ -2.08
RFC3-203ENST00000616236 SNCGO76070 127 aa2.06□□□□□ -2.08
RFC3-203ENST00000616236 GYPBP06028 91 aa2.06□□□□□ -2.08
RFC3-203ENST00000616236 ODF3Q96PU9 254 aa2.06□□□□□ -2.08
RFC3-203ENST00000616236 SERP1Q9Y6X1 66 aa2.06□□□□□ -2.08
RFC3-203ENST00000616236 CITO14578 2027 aa2.06□□□□□ -2.08
RFC3-203ENST00000616236 QRICH2Q9H0J4 1663 aa2.06□□□□□ -2.08
RFC3-203ENST00000616236 TET1Q8NFU7 2136 aa2.05□□□□□ -2.08
RFC3-203ENST00000616236 IGKV2-40A0A087WW87 121 aaPredicted RBP2.05□□□□□ -2.08
RFC3-203ENST00000616236 NDUFB6O95139 128 aa2.05□□□□□ -2.08
RFC3-203ENST00000616236 IGKV2D-40P01614 121 aaPredicted RBP2.05□□□□□ -2.08
RFC3-203ENST00000616236 PIPP12273 146 aaPredicted RBP2.05□□□□□ -2.08
RFC3-203ENST00000616236 GNG4P50150 75 aa2.05□□□□□ -2.08
RFC3-203ENST00000616236 SPATA45Q537H7 98 aa2.05□□□□□ -2.08
RFC3-203ENST00000616236 DMAC1Q96GE9 116 aa2.05□□□□□ -2.08
RFC3-203ENST00000616236 ATG5Q9H1Y0 275 aa2.05□□□□□ -2.08
RFC3-203ENST00000616236 C22orf24Q9Y442 160 aa2.05□□□□□ -2.08
RFC3-203ENST00000616236 A2ML1A8K2U0 1454 aa2.05□□□□□ -2.08
RFC3-203ENST00000616236 PTPRMP28827 1452 aa2.05□□□□□ -2.08
RFC3-203ENST00000616236 MUC22E2RYF6 1773 aaPredicted RBP2.05□□□□□ -2.08
RFC3-203ENST00000616236 TRBV10-1A0A0K0K1A3 114 aa2.04□□□□□ -2.08
RFC3-203ENST00000616236 MCRIP1C9JLW8 97 aa2.04□□□□□ -2.08
RFC3-203ENST00000616236 HIVEP2P31629 2446 aa2.04□□□□□ -2.08
RFC3-203ENST00000616236 MYOM2P54296 1465 aa2.04□□□□□ -2.08
RFC3-203ENST00000616236 Q56UQ5 140 aa2.04□□□□□ -2.08
RFC3-203ENST00000616236 Q6AWC8 147 aa2.04□□□□□ -2.08
RFC3-203ENST00000616236 C14orf144Q96I85 54 aa2.04□□□□□ -2.08
RFC3-203ENST00000616236 C20orf202A1L168 122 aa2.03□□□□□ -2.08
RFC3-203ENST00000616236 TPPP2P59282 170 aa2.03□□□□□ -2.08
RFC3-203ENST00000616236 RPL37AP61513 92 aaKnown RBP2.03□□□□□ -2.08
RFC3-203ENST00000616236 PPP3R1P63098 170 aa2.03□□□□□ -2.08
RFC3-203ENST00000616236 S100A7L2Q5SY68 101 aa2.03□□□□□ -2.08
RFC3-203ENST00000616236 SLC48A1Q6P1K1 146 aa2.03□□□□□ -2.08
RFC3-203ENST00000616236 TMEM141Q96I45 108 aa2.03□□□□□ -2.08
RFC3-203ENST00000616236 KRTAP12-3P60328 96 aa2.02□□□□□ -2.09
RFC3-203ENST00000616236 Q6ZS92 163 aa2.02□□□□□ -2.09
RFC3-203ENST00000616236 LINC00526Q96FQ7 95 aa2.02□□□□□ -2.09
RFC3-203ENST00000616236 E9PCH4 1651 aa2.02□□□□□ -2.09
RFC3-203ENST00000616236 CDK12Q9NYV4 1490 aaPredicted RBP2.01□□□□□ -2.09
RFC3-203ENST00000616236 LAMB1P07942 1786 aa2.01□□□□□ -2.09
RFC3-203ENST00000616236 J3QKU1 62 aa2.01□□□□□ -2.09
RFC3-203ENST00000616236 UBE2G1P62253 170 aa2.01□□□□□ -2.09
RFC3-203ENST00000616236 RPL7L1Q6DKI1 246 aaKnown RBP2.01□□□□□ -2.09
RFC3-203ENST00000616236 MRPL54Q6P161 138 aaKnown RBP2.01□□□□□ -2.09
RFC3-203ENST00000616236 SBSPONQ8IVN8 264 aa2.01□□□□□ -2.09
RFC3-203ENST00000616236 KRTAP4-3Q9BYR4 195 aa2.01□□□□□ -2.09
RFC3-203ENST00000616236 KTN1Q86UP2 1357 aaKnown RBP2□□□□□ -2.09
RFC3-203ENST00000616236 APOC4-APOC2K7ER74 178 aa2□□□□□ -2.09
RFC3-203ENST00000616236 TNFP01375 233 aa2□□□□□ -2.09
RFC3-203ENST00000616236 APOC2P02655 101 aa2□□□□□ -2.09
RFC3-203ENST00000616236 CCKP06307 115 aa2□□□□□ -2.09
RFC3-203ENST00000616236 CATR1Q13166 79 aa2□□□□□ -2.09
RFC3-203ENST00000616236 C10orf105Q8TEF2 133 aa2□□□□□ -2.09
RFC3-203ENST00000616236 IFI27L1Q96BM0 104 aa2□□□□□ -2.09
RFC3-203ENST00000616236 MRPL35Q9NZE8 188 aaKnown RBP2□□□□□ -2.09
RFC3-203ENST00000616236 MED13Q9UHV7 2174 aa1.99□□□□□ -2.09
RFC3-203ENST00000616236 TCRBV3S1A0A5B6 114 aa1.99□□□□□ -2.09
RFC3-203ENST00000616236 RBP2P50120 134 aa1.99□□□□□ -2.09
RFC3-203ENST00000616236 FXYD4P59646 89 aa1.99□□□□□ -2.09
RFC3-203ENST00000616236 C9orf116Q5BN46 136 aaPredicted RBP1.99□□□□□ -2.09
RFC3-203ENST00000616236 MRPL57Q9BQC6 102 aaKnown RBP1.99□□□□□ -2.09
RFC3-203ENST00000616236 DLEC1Q9Y238 1755 aa1.99□□□□□ -2.09
RFC3-203ENST00000616236 PZPP20742 1482 aa1.99□□□□□ -2.09
RFC3-203ENST00000616236 OBSCNQ5VST9 7968 aa1.99□□□□□ -2.09
RFC3-203ENST00000616236 DAPK1P53355 1430 aa1.99□□□□□ -2.09
RFC3-203ENST00000616236 SORL1Q92673 2214 aa1.98□□□□□ -2.09
RFC3-203ENST00000616236 RBBP6Q7Z6E9 1792 aaKnown RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms