RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 LENEPQ9Y5L5 61 aa10.87□□□□□ -0.67
CHD1-212ENST00000614616 PTPRQQ9UMZ3 2332 aa10.87□□□□□ -0.67
CHD1-212ENST00000614616 DAD1P61803 113 aa10.87□□□□□ -0.67
CHD1-212ENST00000614616 ATP5EP2Q5VTU8 51 aa10.87□□□□□ -0.67
CHD1-212ENST00000614616 Q6ZS92 163 aa10.87□□□□□ -0.67
CHD1-212ENST00000614616 TRAV23DV6A0A075B6W5 121 aa10.86□□□□□ -0.67
CHD1-212ENST00000614616 CENPVL3A0A0U1RRI6 287 aa10.86□□□□□ -0.67
CHD1-212ENST00000614616 TEX36Q5VZQ5 186 aa10.86□□□□□ -0.67
CHD1-212ENST00000614616 LINC00694P0DN24 101 aa10.86□□□□□ -0.67
CHD1-212ENST00000614616 IGHV1OR15-1A0A075B7D0 117 aa10.86□□□□□ -0.67
CHD1-212ENST00000614616 PATE3B3GLJ2 98 aa10.86□□□□□ -0.67
CHD1-212ENST00000614616 PRSS22Q9GZN4 317 aa10.86□□□□□ -0.67
CHD1-212ENST00000614616 WT1-ASQ06250 92 aa10.86□□□□□ -0.67
CHD1-212ENST00000614616 NKAPP1Q8N9T2 125 aa10.86□□□□□ -0.67
CHD1-212ENST00000614616 SPTSSBQ8NFR3 76 aa10.85□□□□□ -0.67
CHD1-212ENST00000614616 MRPL53Q96EL3 112 aaKnown RBP10.85□□□□□ -0.67
CHD1-212ENST00000614616 C15orf65H3BRN8 121 aa10.85□□□□□ -0.67
CHD1-212ENST00000614616 Q6Q795 121 aa10.85□□□□□ -0.67
CHD1-212ENST00000614616 PCSK5Q92824 1860 aa10.85□□□□□ -0.67
CHD1-212ENST00000614616 P0DMU3 169 aa10.85□□□□□ -0.67
CHD1-212ENST00000614616 FAM231AP0DMU4 169 aa10.85□□□□□ -0.67
CHD1-212ENST00000614616 FAM231CP0DMU5 169 aa10.85□□□□□ -0.67
CHD1-212ENST00000614616 HTN3P15516 51 aa10.85□□□□□ -0.67
CHD1-212ENST00000614616 MSRB2Q9Y3D2 182 aa10.85□□□□□ -0.67
CHD1-212ENST00000614616 TECTAO75443 2155 aa10.85□□□□□ -0.67
CHD1-212ENST00000614616 CRYGCP07315 174 aa10.84□□□□□ -0.67
CHD1-212ENST00000614616 RHPN1-AS1Q9BWJ2 59 aa10.84□□□□□ -0.67
CHD1-212ENST00000614616 C17orf58Q2M2W7 97 aa10.84□□□□□ -0.67
CHD1-212ENST00000614616 RPL39LQ96EH5 51 aaKnown RBP10.84□□□□□ -0.67
CHD1-212ENST00000614616 PDE6GP18545 87 aa10.84□□□□□ -0.67
CHD1-212ENST00000614616 CRIPAKQ8N1N5 446 aa10.84□□□□□ -0.67
CHD1-212ENST00000614616 SDIM1Q6ZPB5 146 aa10.84□□□□□ -0.67
CHD1-212ENST00000614616 FANCD2OSQ96PS1 177 aa10.84□□□□□ -0.67
CHD1-212ENST00000614616 IGHV3-53P01767 116 aa10.83□□□□□ -0.67
CHD1-212ENST00000614616 TRAV12-2A0A075B6T6 113 aa10.83□□□□□ -0.68
CHD1-212ENST00000614616 PRB1P04280 392 aa10.83□□□□□ -0.68
CHD1-212ENST00000614616 SERP2Q8N6R1 65 aa10.83□□□□□ -0.68
CHD1-212ENST00000614616 SND1-IT1Q9HBX3 110 aa10.83□□□□□ -0.68
CHD1-212ENST00000614616 RNASE13Q5GAN3 156 aaKnown RBP10.83□□□□□ -0.68
CHD1-212ENST00000614616 LINC01560Q8TB33 94 aa10.83□□□□□ -0.68
CHD1-212ENST00000614616 ZNF561-AS1K7EIQ3 104 aa10.83□□□□□ -0.68
CHD1-212ENST00000614616 PRR30Q53SZ7 412 aaPredicted RBP10.83□□□□□ -0.68
CHD1-212ENST00000614616 COX7CP15954 63 aa10.83□□□□□ -0.68
CHD1-212ENST00000614616 COX7B2Q8TF08 81 aa10.82□□□□□ -0.68
CHD1-212ENST00000614616 C7orf69Q9H7B7 122 aa10.82□□□□□ -0.68
CHD1-212ENST00000614616 LTBRP36941 435 aa10.82□□□□□ -0.68
CHD1-212ENST00000614616 ZNF503Q96F45 646 aa10.82□□□□□ -0.68
CHD1-212ENST00000614616 A0A1B0GXF2 115 aa10.82□□□□□ -0.68
CHD1-212ENST00000614616 RNASE6Q93091 150 aaKnown RBP10.82□□□□□ -0.68
CHD1-212ENST00000614616 CSPG4Q6UVK1 2322 aa10.82□□□□□ -0.68
CHD1-212ENST00000614616 SPINK13Q1W4C9 94 aa10.82□□□□□ -0.68
CHD1-212ENST00000614616 C10orf105Q8TEF2 133 aa10.81□□□□□ -0.68
CHD1-212ENST00000614616 BUB3O43684 328 aa10.81□□□□□ -0.68
CHD1-212ENST00000614616 OPRPNQ99935 248 aaPredicted RBP10.81□□□□□ -0.68
CHD1-212ENST00000614616 SMIM9A6NGZ8 99 aa10.81□□□□□ -0.68
CHD1-212ENST00000614616 F5H768 121 aa10.81□□□□□ -0.68
CHD1-212ENST00000614616 CD59P13987 128 aa10.81□□□□□ -0.68
CHD1-212ENST00000614616 HIGD2BQ4VC39 106 aa10.8□□□□□ -0.68
CHD1-212ENST00000614616 NBASA2RRP1 2371 aa10.8□□□□□ -0.68
CHD1-212ENST00000614616 PINLYPA6NC86 204 aa10.8□□□□□ -0.68
CHD1-212ENST00000614616 FAM167A-AS1Q96KT0 104 aa10.8□□□□□ -0.68
CHD1-212ENST00000614616 OTOGLQ3ZCN5 2332 aa10.8□□□□□ -0.68
CHD1-212ENST00000614616 TRAV4A0A0B4J268 109 aa10.8□□□□□ -0.68
CHD1-212ENST00000614616 GP9P14770 177 aa10.8□□□□□ -0.68
CHD1-212ENST00000614616 GATA1P15976 413 aaPredicted RBP10.8□□□□□ -0.68
CHD1-212ENST00000614616 NREPQ16612 68 aa10.8□□□□□ -0.68
CHD1-212ENST00000614616 MIAQ16674 131 aa10.8□□□□□ -0.68
CHD1-212ENST00000614616 LINC00311Q8N616 119 aa10.8□□□□□ -0.68
CHD1-212ENST00000614616 TRBV6-1A0A0K0K1D8 114 aa10.8□□□□□ -0.68
CHD1-212ENST00000614616 KLK9Q9UKQ9 250 aa10.8□□□□□ -0.68
CHD1-212ENST00000614616 IGHV1-69P01742 117 aa10.8□□□□□ -0.68
CHD1-212ENST00000614616 TIMM17AQ99595 171 aa10.8□□□□□ -0.68
CHD1-212ENST00000614616 CHKB-CPT1BH3BT56 60 aa10.79□□□□□ -0.68
CHD1-212ENST00000614616 C20orf197Q8N268 126 aa10.79□□□□□ -0.68
CHD1-212ENST00000614616 UCNP55089 124 aa10.79□□□□□ -0.68
CHD1-212ENST00000614616 C2orf91Q6ZV80 131 aa10.79□□□□□ -0.68
CHD1-212ENST00000614616 C11orf1Q9H5F2 150 aa10.79□□□□□ -0.68
CHD1-212ENST00000614616 FAM110DQ8TAY7 271 aaPredicted RBP10.79□□□□□ -0.68
CHD1-212ENST00000614616 GATA4P43694 442 aa10.79□□□□□ -0.68
CHD1-212ENST00000614616 B3GALT5-AS1P59052 145 aa10.79□□□□□ -0.68
CHD1-212ENST00000614616 MRPS36P82909 103 aaKnown RBP10.79□□□□□ -0.68
CHD1-212ENST00000614616 FOXE3Q13461 319 aa10.79□□□□□ -0.68
CHD1-212ENST00000614616 DAZ2Q13117 558 aaKnown RBP10.79□□□□□ -0.68
CHD1-212ENST00000614616 DAZ4Q86SG3 579 aaKnown RBP10.79□□□□□ -0.68
CHD1-212ENST00000614616 DAZ3Q9NR90 486 aaKnown RBP10.79□□□□□ -0.68
CHD1-212ENST00000614616 WISP1O95388 367 aa10.79□□□□□ -0.68
CHD1-212ENST00000614616 ATP1A1-AS1Q5TC04 95 aa10.79□□□□□ -0.68
CHD1-212ENST00000614616 C17orf77Q96MU5 243 aa10.79□□□□□ -0.68
CHD1-212ENST00000614616 TRBV12-3P01733 135 aa10.78□□□□□ -0.68
CHD1-212ENST00000614616 IGHV3-16A0A0C4DH30 117 aa10.78□□□□□ -0.68
CHD1-212ENST00000614616 WI2-2373I1.2A0A1W2PRP0 233 aa10.78□□□□□ -0.68
CHD1-212ENST00000614616 C14orf132Q9NPU4 83 aa10.78□□□□□ -0.68
CHD1-212ENST00000614616 ZNRD1Q9P1U0 126 aa10.78□□□□□ -0.68
CHD1-212ENST00000614616 RPL18AQ02543 176 aaKnown RBP10.78□□□□□ -0.68
CHD1-212ENST00000614616 ZNF491Q8N8L2 437 aa10.78□□□□□ -0.68
CHD1-212ENST00000614616 ZNRF2Q8NHG8 242 aa10.78□□□□□ -0.68
CHD1-212ENST00000614616 NDUFA4O00483 81 aa10.78□□□□□ -0.68
CHD1-212ENST00000614616 CSDC2Q9Y534 153 aaKnown RBP10.78□□□□□ -0.68
CHD1-212ENST00000614616 PROP1O75360 226 aa10.77□□□□□ -0.68
CHD1-212ENST00000614616 DEFB123Q8N688 67 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms