RNA–Protein interactions for RNA: ENST00000613355.4

CBWD1-221, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-221ENST00000613355 C6orf223Q8N319 242 aa8.55□□□□□ -1.04
CBWD1-221ENST00000613355 NHLRC2Q8NBF2 726 aa8.55□□□□□ -1.04
CBWD1-221ENST00000613355 A8MWV9 139 aa8.54□□□□□ -1.04
CBWD1-221ENST00000613355 EREGO14944 169 aa8.54□□□□□ -1.04
CBWD1-221ENST00000613355 SIVA1O15304 175 aa8.54□□□□□ -1.04
CBWD1-221ENST00000613355 BTF3P20290 206 aaKnown RBP8.54□□□□□ -1.04
CBWD1-221ENST00000613355 PTH2Q96A98 100 aa8.54□□□□□ -1.04
CBWD1-221ENST00000613355 LTAP01374 205 aa8.54□□□□□ -1.04
CBWD1-221ENST00000613355 MGST1P10620 155 aaKnown RBP8.54□□□□□ -1.04
CBWD1-221ENST00000613355 RHOHQ15669 191 aa8.54□□□□□ -1.04
CBWD1-221ENST00000613355 PIK3CD-AS1Q5SR53 167 aa8.54□□□□□ -1.04
CBWD1-221ENST00000613355 Q6ZNX1 250 aa8.54□□□□□ -1.04
CBWD1-221ENST00000613355 C9orf85Q96MD7 179 aa8.54□□□□□ -1.04
CBWD1-221ENST00000613355 IL36BQ9NZH7 164 aa8.54□□□□□ -1.04
CBWD1-221ENST00000613355 GNG13Q9P2W3 67 aa8.54□□□□□ -1.04
CBWD1-221ENST00000613355 hCG_2014768A0A024R1R8 64 aa8.53□□□□□ -1.04
CBWD1-221ENST00000613355 K7EQD1 137 aa8.53□□□□□ -1.04
CBWD1-221ENST00000613355 M0R036 132 aa8.53□□□□□ -1.04
CBWD1-221ENST00000613355 RTL8CO15255 209 aa8.53□□□□□ -1.04
CBWD1-221ENST00000613355 SH2D1AO60880 128 aa8.53□□□□□ -1.04
CBWD1-221ENST00000613355 ZNF506Q5JVG8 444 aa8.53□□□□□ -1.04
CBWD1-221ENST00000613355 ZC2HC1AQ96GY0 325 aa8.53□□□□□ -1.04
CBWD1-221ENST00000613355 C11orf21Q9P2W6 132 aa8.53□□□□□ -1.04
CBWD1-221ENST00000613355 PHLDA3Q9Y5J5 127 aa8.53□□□□□ -1.04
CBWD1-221ENST00000613355 KMT2AQ03164 3969 aa8.52□□□□□ -1.04
CBWD1-221ENST00000613355 TRBV6-4A0A1B0GX49 114 aa8.52□□□□□ -1.05
CBWD1-221ENST00000613355 RS1O15537 224 aa8.52□□□□□ -1.05
CBWD1-221ENST00000613355 NXPH4O95158 308 aa8.52□□□□□ -1.05
CBWD1-221ENST00000613355 TAGLN2P37802 199 aaKnown RBP8.52□□□□□ -1.05
CBWD1-221ENST00000613355 SULT1A2P50226 295 aa8.52□□□□□ -1.05
CBWD1-221ENST00000613355 LYPD5Q6UWN5 251 aa8.52□□□□□ -1.05
CBWD1-221ENST00000613355 COX8CQ7Z4L0 72 aa8.52□□□□□ -1.05
CBWD1-221ENST00000613355 BAGE2Q86Y30 109 aa8.52□□□□□ -1.05
CBWD1-221ENST00000613355 TRAV1-1A0A0B4J248 108 aa8.51□□□□□ -1.05
CBWD1-221ENST00000613355 IGKV3D-20A0A0C4DH25 116 aa8.51□□□□□ -1.05
CBWD1-221ENST00000613355 SCO2A0A1W2PP80 73 aa8.51□□□□□ -1.05
CBWD1-221ENST00000613355 PGPEP1LA6NFU8 196 aa8.51□□□□□ -1.05
CBWD1-221ENST00000613355 KRBOX1C9JBD0 128 aa8.51□□□□□ -1.05
CBWD1-221ENST00000613355 H3BVH4 76 aa8.51□□□□□ -1.05
CBWD1-221ENST00000613355 K7EP13 123 aa8.51□□□□□ -1.05
CBWD1-221ENST00000613355 RHODO00212 210 aa8.51□□□□□ -1.05
CBWD1-221ENST00000613355 RNASE3P12724 160 aaKnown RBP8.51□□□□□ -1.05
CBWD1-221ENST00000613355 GATA1P15976 413 aaPredicted RBP8.51□□□□□ -1.05
CBWD1-221ENST00000613355 EVI2AP22794 236 aa8.51□□□□□ -1.05
CBWD1-221ENST00000613355 ZNF674Q2M3X9 581 aa8.51□□□□□ -1.05
CBWD1-221ENST00000613355 CFAP126Q5VTH2 177 aa8.51□□□□□ -1.05
CBWD1-221ENST00000613355 LY96Q9Y6Y9 160 aa8.51□□□□□ -1.05
CBWD1-221ENST00000613355 TRAV8-6A0A0B4J262 113 aa8.5□□□□□ -1.05
CBWD1-221ENST00000613355 PDE6DO43924 150 aa8.5□□□□□ -1.05
CBWD1-221ENST00000613355 ARMS2P0C7Q2 107 aa8.5□□□□□ -1.05
CBWD1-221ENST00000613355 ZFP2Q6ZN57 461 aa8.5□□□□□ -1.05
CBWD1-221ENST00000613355 ZFP82Q8N141 532 aa8.5□□□□□ -1.05
CBWD1-221ENST00000613355 DAZAP1Q96EP5 407 aaKnown RBP8.5□□□□□ -1.05
CBWD1-221ENST00000613355 VPS13DQ5THJ4 4388 aa8.5□□□□□ -1.05
CBWD1-221ENST00000613355 TMSB15BA0A087X1C1 80 aa8.49□□□□□ -1.05
CBWD1-221ENST00000613355 IGHV3-73A0A0B4J1V6 119 aa8.49□□□□□ -1.05
CBWD1-221ENST00000613355 GRIFINA4D1Z8 144 aa8.49□□□□□ -1.05
CBWD1-221ENST00000613355 DNLZQ5SXM8 178 aa8.49□□□□□ -1.05
CBWD1-221ENST00000613355 PRR27Q6MZM9 219 aa8.49□□□□□ -1.05
CBWD1-221ENST00000613355 NFE4Q86UQ8 179 aa8.49□□□□□ -1.05
CBWD1-221ENST00000613355 C10orf126Q8N4M7 172 aa8.49□□□□□ -1.05
CBWD1-221ENST00000613355 SLC25A29Q8N8R3 303 aa8.49□□□□□ -1.05
CBWD1-221ENST00000613355 BIN3Q9NQY0 253 aa8.49□□□□□ -1.05
CBWD1-221ENST00000613355 DNAH6Q9C0G6 4158 aa8.48□□□□□ -1.05
CBWD1-221ENST00000613355 M0R381 172 aa8.48□□□□□ -1.05
CBWD1-221ENST00000613355 RPL35P42766 123 aaKnown RBP8.48□□□□□ -1.05
CBWD1-221ENST00000613355 MEF2BQ02080 365 aaPredicted RBP8.48□□□□□ -1.05
CBWD1-221ENST00000613355 PARLQ9H300 379 aa8.48□□□□□ -1.05
CBWD1-221ENST00000613355 XKRY2A2RUG3 117 aa8.47□□□□□ -1.05
CBWD1-221ENST00000613355 CXCL1P09341 107 aa8.47□□□□□ -1.05
CBWD1-221ENST00000613355 MED14OSP0DP75 135 aa8.47□□□□□ -1.05
CBWD1-221ENST00000613355 CRIP1P50238 77 aa8.47□□□□□ -1.05
CBWD1-221ENST00000613355 BLOC1S1P78537 153 aa8.47□□□□□ -1.05
CBWD1-221ENST00000613355 OR10J3Q5JRS4 329 aa8.47□□□□□ -1.05
CBWD1-221ENST00000613355 FAM74A4Q5TZK3 123 aa8.47□□□□□ -1.05
CBWD1-221ENST00000613355 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.47□□□□□ -1.05
CBWD1-221ENST00000613355 SMIM12Q96EX1 92 aa8.47□□□□□ -1.05
CBWD1-221ENST00000613355 VAX2Q9UIW0 290 aa8.47□□□□□ -1.05
CBWD1-221ENST00000613355 GNG4P50150 75 aa8.46□□□□□ -1.05
CBWD1-221ENST00000613355 TIRAPP58753 221 aa8.46□□□□□ -1.05
CBWD1-221ENST00000613355 SPANXN1Q5VSR9 72 aa8.46□□□□□ -1.05
CBWD1-221ENST00000613355 ATP6V0E2Q8NHE4 81 aa8.46□□□□□ -1.05
CBWD1-221ENST00000613355 C11orf52Q96A22 123 aa8.46□□□□□ -1.05
CBWD1-221ENST00000613355 MED9Q9NWA0 146 aa8.46□□□□□ -1.05
CBWD1-221ENST00000613355 LOC100131303A0A0U1RQF7 123 aa8.46□□□□□ -1.06
CBWD1-221ENST00000613355 BCL2P10415 239 aa8.46□□□□□ -1.06
CBWD1-221ENST00000613355 RPS20P60866 119 aaKnown RBP8.46□□□□□ -1.06
CBWD1-221ENST00000613355 IGHV3-38A0A0C4DH36 116 aa8.45□□□□□ -1.06
CBWD1-221ENST00000613355 A0A1B0GVY2 172 aa8.45□□□□□ -1.06
CBWD1-221ENST00000613355 SMIM17P0DL12 118 aa8.45□□□□□ -1.06
CBWD1-221ENST00000613355 LINC00315P59091 139 aa8.45□□□□□ -1.06
CBWD1-221ENST00000613355 CCL20P78556 96 aa8.45□□□□□ -1.06
CBWD1-221ENST00000613355 CENPWQ5EE01 88 aa8.45□□□□□ -1.06
CBWD1-221ENST00000613355 C9orf62Q8N4C0 152 aa8.45□□□□□ -1.06
CBWD1-221ENST00000613355 MLST8Q9BVC4 326 aa8.45□□□□□ -1.06
CBWD1-221ENST00000613355 GTSF1LQ9H1H1 148 aa8.45□□□□□ -1.06
CBWD1-221ENST00000613355 EPPK1P58107 5090 aaKnown RBP8.44□□□□□ -1.06
CBWD1-221ENST00000613355 A0A087WWC5 75 aa8.44□□□□□ -1.06
CBWD1-221ENST00000613355 CRYGDP07320 174 aa8.44□□□□□ -1.06
CBWD1-221ENST00000613355 LELP1Q5T871 98 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms