RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 GYPEP15421 78 aa8.55□□□□□ -1.04
CBWD3-208ENST00000612050 SLC51BQ86UW2 128 aa8.55□□□□□ -1.04
CBWD3-208ENST00000612050 C6orf223Q8N319 242 aa8.55□□□□□ -1.04
CBWD3-208ENST00000612050 NHLRC2Q8NBF2 726 aa8.55□□□□□ -1.04
CBWD3-208ENST00000612050 A8MWV9 139 aa8.54□□□□□ -1.04
CBWD3-208ENST00000612050 SIVA1O15304 175 aa8.54□□□□□ -1.04
CBWD3-208ENST00000612050 BTF3P20290 206 aaKnown RBP8.54□□□□□ -1.04
CBWD3-208ENST00000612050 PTH2Q96A98 100 aa8.54□□□□□ -1.04
CBWD3-208ENST00000612050 LTAP01374 205 aa8.54□□□□□ -1.04
CBWD3-208ENST00000612050 MGST1P10620 155 aaKnown RBP8.54□□□□□ -1.04
CBWD3-208ENST00000612050 RHOHQ15669 191 aa8.54□□□□□ -1.04
CBWD3-208ENST00000612050 PIK3CD-AS1Q5SR53 167 aa8.54□□□□□ -1.04
CBWD3-208ENST00000612050 Q6ZNX1 250 aa8.54□□□□□ -1.04
CBWD3-208ENST00000612050 C9orf85Q96MD7 179 aa8.54□□□□□ -1.04
CBWD3-208ENST00000612050 IL36BQ9NZH7 164 aa8.54□□□□□ -1.04
CBWD3-208ENST00000612050 GNG13Q9P2W3 67 aa8.54□□□□□ -1.04
CBWD3-208ENST00000612050 hCG_2014768A0A024R1R8 64 aa8.53□□□□□ -1.04
CBWD3-208ENST00000612050 K7EQD1 137 aa8.53□□□□□ -1.04
CBWD3-208ENST00000612050 M0R036 132 aa8.53□□□□□ -1.04
CBWD3-208ENST00000612050 RTL8CO15255 209 aa8.53□□□□□ -1.04
CBWD3-208ENST00000612050 SH2D1AO60880 128 aa8.53□□□□□ -1.04
CBWD3-208ENST00000612050 ZNF506Q5JVG8 444 aa8.53□□□□□ -1.04
CBWD3-208ENST00000612050 ZC2HC1AQ96GY0 325 aa8.53□□□□□ -1.04
CBWD3-208ENST00000612050 C11orf21Q9P2W6 132 aa8.53□□□□□ -1.04
CBWD3-208ENST00000612050 PHLDA3Q9Y5J5 127 aa8.53□□□□□ -1.04
CBWD3-208ENST00000612050 KMT2AQ03164 3969 aa8.52□□□□□ -1.04
CBWD3-208ENST00000612050 TRBV6-4A0A1B0GX49 114 aa8.52□□□□□ -1.05
CBWD3-208ENST00000612050 RS1O15537 224 aa8.52□□□□□ -1.05
CBWD3-208ENST00000612050 NXPH4O95158 308 aa8.52□□□□□ -1.05
CBWD3-208ENST00000612050 TAGLN2P37802 199 aaKnown RBP8.52□□□□□ -1.05
CBWD3-208ENST00000612050 SULT1A2P50226 295 aa8.52□□□□□ -1.05
CBWD3-208ENST00000612050 LYPD5Q6UWN5 251 aa8.52□□□□□ -1.05
CBWD3-208ENST00000612050 COX8CQ7Z4L0 72 aa8.52□□□□□ -1.05
CBWD3-208ENST00000612050 BAGE2Q86Y30 109 aa8.52□□□□□ -1.05
CBWD3-208ENST00000612050 TRAV1-1A0A0B4J248 108 aa8.51□□□□□ -1.05
CBWD3-208ENST00000612050 IGKV3D-20A0A0C4DH25 116 aa8.51□□□□□ -1.05
CBWD3-208ENST00000612050 SCO2A0A1W2PP80 73 aa8.51□□□□□ -1.05
CBWD3-208ENST00000612050 PGPEP1LA6NFU8 196 aa8.51□□□□□ -1.05
CBWD3-208ENST00000612050 KRBOX1C9JBD0 128 aa8.51□□□□□ -1.05
CBWD3-208ENST00000612050 H3BVH4 76 aa8.51□□□□□ -1.05
CBWD3-208ENST00000612050 K7EP13 123 aa8.51□□□□□ -1.05
CBWD3-208ENST00000612050 RHODO00212 210 aa8.51□□□□□ -1.05
CBWD3-208ENST00000612050 RNASE3P12724 160 aaKnown RBP8.51□□□□□ -1.05
CBWD3-208ENST00000612050 GATA1P15976 413 aaPredicted RBP8.51□□□□□ -1.05
CBWD3-208ENST00000612050 EVI2AP22794 236 aa8.51□□□□□ -1.05
CBWD3-208ENST00000612050 ZNF674Q2M3X9 581 aa8.51□□□□□ -1.05
CBWD3-208ENST00000612050 CFAP126Q5VTH2 177 aa8.51□□□□□ -1.05
CBWD3-208ENST00000612050 LY96Q9Y6Y9 160 aa8.51□□□□□ -1.05
CBWD3-208ENST00000612050 TRAV8-6A0A0B4J262 113 aa8.5□□□□□ -1.05
CBWD3-208ENST00000612050 PDE6DO43924 150 aa8.5□□□□□ -1.05
CBWD3-208ENST00000612050 ARMS2P0C7Q2 107 aa8.5□□□□□ -1.05
CBWD3-208ENST00000612050 ZFP2Q6ZN57 461 aa8.5□□□□□ -1.05
CBWD3-208ENST00000612050 ZFP82Q8N141 532 aa8.5□□□□□ -1.05
CBWD3-208ENST00000612050 DAZAP1Q96EP5 407 aaKnown RBP8.5□□□□□ -1.05
CBWD3-208ENST00000612050 VPS13DQ5THJ4 4388 aa8.5□□□□□ -1.05
CBWD3-208ENST00000612050 TMSB15BA0A087X1C1 80 aa8.49□□□□□ -1.05
CBWD3-208ENST00000612050 IGHV3-73A0A0B4J1V6 119 aa8.49□□□□□ -1.05
CBWD3-208ENST00000612050 GRIFINA4D1Z8 144 aa8.49□□□□□ -1.05
CBWD3-208ENST00000612050 DNLZQ5SXM8 178 aa8.49□□□□□ -1.05
CBWD3-208ENST00000612050 PRR27Q6MZM9 219 aa8.49□□□□□ -1.05
CBWD3-208ENST00000612050 NFE4Q86UQ8 179 aa8.49□□□□□ -1.05
CBWD3-208ENST00000612050 C10orf126Q8N4M7 172 aa8.49□□□□□ -1.05
CBWD3-208ENST00000612050 SLC25A29Q8N8R3 303 aa8.49□□□□□ -1.05
CBWD3-208ENST00000612050 BIN3Q9NQY0 253 aa8.49□□□□□ -1.05
CBWD3-208ENST00000612050 DNAH6Q9C0G6 4158 aa8.48□□□□□ -1.05
CBWD3-208ENST00000612050 M0R381 172 aa8.48□□□□□ -1.05
CBWD3-208ENST00000612050 EREGO14944 169 aa8.48□□□□□ -1.05
CBWD3-208ENST00000612050 RPL35P42766 123 aaKnown RBP8.48□□□□□ -1.05
CBWD3-208ENST00000612050 MEF2BQ02080 365 aaPredicted RBP8.48□□□□□ -1.05
CBWD3-208ENST00000612050 PARLQ9H300 379 aa8.48□□□□□ -1.05
CBWD3-208ENST00000612050 XKRY2A2RUG3 117 aa8.47□□□□□ -1.05
CBWD3-208ENST00000612050 CXCL1P09341 107 aa8.47□□□□□ -1.05
CBWD3-208ENST00000612050 MED14OSP0DP75 135 aa8.47□□□□□ -1.05
CBWD3-208ENST00000612050 CRIP1P50238 77 aa8.47□□□□□ -1.05
CBWD3-208ENST00000612050 BLOC1S1P78537 153 aa8.47□□□□□ -1.05
CBWD3-208ENST00000612050 OR10J3Q5JRS4 329 aa8.47□□□□□ -1.05
CBWD3-208ENST00000612050 FAM74A4Q5TZK3 123 aa8.47□□□□□ -1.05
CBWD3-208ENST00000612050 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.47□□□□□ -1.05
CBWD3-208ENST00000612050 SMIM12Q96EX1 92 aa8.47□□□□□ -1.05
CBWD3-208ENST00000612050 VAX2Q9UIW0 290 aa8.47□□□□□ -1.05
CBWD3-208ENST00000612050 GNG4P50150 75 aa8.46□□□□□ -1.05
CBWD3-208ENST00000612050 TIRAPP58753 221 aa8.46□□□□□ -1.05
CBWD3-208ENST00000612050 SPANXN1Q5VSR9 72 aa8.46□□□□□ -1.05
CBWD3-208ENST00000612050 ATP6V0E2Q8NHE4 81 aa8.46□□□□□ -1.05
CBWD3-208ENST00000612050 C11orf52Q96A22 123 aa8.46□□□□□ -1.05
CBWD3-208ENST00000612050 MED9Q9NWA0 146 aa8.46□□□□□ -1.05
CBWD3-208ENST00000612050 LOC100131303A0A0U1RQF7 123 aa8.46□□□□□ -1.06
CBWD3-208ENST00000612050 BCL2P10415 239 aa8.46□□□□□ -1.06
CBWD3-208ENST00000612050 RPS20P60866 119 aaKnown RBP8.46□□□□□ -1.06
CBWD3-208ENST00000612050 IGHV3-38A0A0C4DH36 116 aa8.45□□□□□ -1.06
CBWD3-208ENST00000612050 A0A1B0GVY2 172 aa8.45□□□□□ -1.06
CBWD3-208ENST00000612050 SMIM17P0DL12 118 aa8.45□□□□□ -1.06
CBWD3-208ENST00000612050 LINC00315P59091 139 aa8.45□□□□□ -1.06
CBWD3-208ENST00000612050 CCL20P78556 96 aa8.45□□□□□ -1.06
CBWD3-208ENST00000612050 CENPWQ5EE01 88 aa8.45□□□□□ -1.06
CBWD3-208ENST00000612050 C9orf62Q8N4C0 152 aa8.45□□□□□ -1.06
CBWD3-208ENST00000612050 MLST8Q9BVC4 326 aa8.45□□□□□ -1.06
CBWD3-208ENST00000612050 GTSF1LQ9H1H1 148 aa8.45□□□□□ -1.06
CBWD3-208ENST00000612050 EPPK1P58107 5090 aaKnown RBP8.44□□□□□ -1.06
CBWD3-208ENST00000612050 A0A087WWC5 75 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms