RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 C9orf62Q8N4C0 152 aa13.32□□□□□ -0.28
SRSF4-206ENST00000605204 ZC2HC1AQ96GY0 325 aa13.32□□□□□ -0.28
SRSF4-206ENST00000605204 IL36BQ9NZH7 164 aa13.32□□□□□ -0.28
SRSF4-206ENST00000605204 GNG13Q9P2W3 67 aa13.32□□□□□ -0.28
SRSF4-206ENST00000605204 B4DEV8 164 aa13.31□□□□□ -0.28
SRSF4-206ENST00000605204 M0R2N4 97 aa13.31□□□□□ -0.28
SRSF4-206ENST00000605204 SFTA3P0C7M3 94 aa13.31□□□□□ -0.28
SRSF4-206ENST00000605204 RNASE3P12724 160 aaKnown RBP13.31□□□□□ -0.28
SRSF4-206ENST00000605204 TAGLN2P37802 199 aaKnown RBP13.31□□□□□ -0.28
SRSF4-206ENST00000605204 ZNF674Q2M3X9 581 aa13.31□□□□□ -0.28
SRSF4-206ENST00000605204 DNLZQ5SXM8 178 aa13.31□□□□□ -0.28
SRSF4-206ENST00000605204 SH2D6Q7Z4S9 175 aa13.31□□□□□ -0.28
SRSF4-206ENST00000605204 NBDYA0A0U1RRE5 68 aa13.3□□□□□ -0.28
SRSF4-206ENST00000605204 SCO2A0A1W2PP80 73 aa13.3□□□□□ -0.28
SRSF4-206ENST00000605204 SH2D1AO60880 128 aa13.3□□□□□ -0.28
SRSF4-206ENST00000605204 ESRGQ1W209 222 aa13.3□□□□□ -0.28
SRSF4-206ENST00000605204 C11orf52Q96A22 123 aa13.3□□□□□ -0.28
SRSF4-206ENST00000605204 MUC4Q99102 2169 aa13.3□□□□□ -0.28
SRSF4-206ENST00000605204 PKD1P98161 4303 aa13.29□□□□□ -0.28
SRSF4-206ENST00000605204 LINC01559Q495D7 138 aa13.29□□□□□ -0.28
SRSF4-206ENST00000605204 NEGR1Q7Z3B1 354 aa13.29□□□□□ -0.28
SRSF4-206ENST00000605204 A0A1W2PPQ1 181 aa13.28□□□□□ -0.28
SRSF4-206ENST00000605204 A8MWV9 139 aa13.28□□□□□ -0.28
SRSF4-206ENST00000605204 KRBOX1C9JBD0 128 aa13.28□□□□□ -0.28
SRSF4-206ENST00000605204 PDE6DO43924 150 aa13.28□□□□□ -0.28
SRSF4-206ENST00000605204 BTF3P20290 206 aaKnown RBP13.28□□□□□ -0.28
SRSF4-206ENST00000605204 SRIP30626 198 aa13.28□□□□□ -0.28
SRSF4-206ENST00000605204 CRIP1P50238 77 aa13.28□□□□□ -0.28
SRSF4-206ENST00000605204 C1orf134Q5TEV5 83 aa13.28□□□□□ -0.28
SRSF4-206ENST00000605204 BAGE2Q86Y30 109 aa13.28□□□□□ -0.28
SRSF4-206ENST00000605204 Q9H8V8 135 aa13.28□□□□□ -0.28
SRSF4-206ENST00000605204 RS1O15537 224 aa13.27□□□□□ -0.29
SRSF4-206ENST00000605204 GATA1P15976 413 aaPredicted RBP13.27□□□□□ -0.29
SRSF4-206ENST00000605204 ZNF506Q5JVG8 444 aa13.27□□□□□ -0.29
SRSF4-206ENST00000605204 CFAP126Q5VTH2 177 aa13.27□□□□□ -0.29
SRSF4-206ENST00000605204 SYT8Q8NBV8 401 aa13.27□□□□□ -0.29
SRSF4-206ENST00000605204 MLST8Q9BVC4 326 aa13.27□□□□□ -0.29
SRSF4-206ENST00000605204 K7EQD1 137 aa13.26□□□□□ -0.29
SRSF4-206ENST00000605204 MGST1P10620 155 aaKnown RBP13.26□□□□□ -0.29
SRSF4-206ENST00000605204 CCL20P78556 96 aa13.26□□□□□ -0.29
SRSF4-206ENST00000605204 MEF2BQ02080 365 aaPredicted RBP13.26□□□□□ -0.29
SRSF4-206ENST00000605204 SMIM12Q96EX1 92 aa13.26□□□□□ -0.29
SRSF4-206ENST00000605204 TRBV6-4A0A1B0GX49 114 aa13.25□□□□□ -0.29
SRSF4-206ENST00000605204 PGPEP1LA6NFU8 196 aa13.25□□□□□ -0.29
SRSF4-206ENST00000605204 M0R036 132 aa13.25□□□□□ -0.29
SRSF4-206ENST00000605204 CXCL1P09341 107 aa13.25□□□□□ -0.29
SRSF4-206ENST00000605204 GYPEP15421 78 aa13.25□□□□□ -0.29
SRSF4-206ENST00000605204 RPL35P42766 123 aaKnown RBP13.25□□□□□ -0.29
SRSF4-206ENST00000605204 RHOHQ15669 191 aa13.25□□□□□ -0.29
SRSF4-206ENST00000605204 ZFP2Q6ZN57 461 aa13.25□□□□□ -0.29
SRSF4-206ENST00000605204 PRADC1Q9BSG0 188 aa13.25□□□□□ -0.29
SRSF4-206ENST00000605204 H3BVH4 76 aa13.24□□□□□ -0.29
SRSF4-206ENST00000605204 RTL8CO15255 209 aa13.24□□□□□ -0.29
SRSF4-206ENST00000605204 MED14OSP0DP75 135 aa13.24□□□□□ -0.29
SRSF4-206ENST00000605204 BCL2P10415 239 aa13.24□□□□□ -0.29
SRSF4-206ENST00000605204 VAX2Q9UIW0 290 aa13.24□□□□□ -0.29
SRSF4-206ENST00000605204 NACAE9PAV3 2078 aa13.24□□□□□ -0.29
SRSF4-206ENST00000605204 RHODO00212 210 aa13.23□□□□□ -0.29
SRSF4-206ENST00000605204 BOLA1Q9Y3E2 137 aa13.23□□□□□ -0.29
SRSF4-206ENST00000605204 PHLDA3Q9Y5J5 127 aa13.23□□□□□ -0.29
SRSF4-206ENST00000605204 PRSS29PA6NIE9 313 aa13.22□□□□□ -0.29
SRSF4-206ENST00000605204 ARMS2P0C7Q2 107 aa13.22□□□□□ -0.29
SRSF4-206ENST00000605204 TIRAPP58753 221 aa13.22□□□□□ -0.29
SRSF4-206ENST00000605204 BLOC1S1P78537 153 aa13.22□□□□□ -0.29
SRSF4-206ENST00000605204 LYPD5Q6UWN5 251 aa13.22□□□□□ -0.29
SRSF4-206ENST00000605204 C6orf223Q8N319 242 aa13.22□□□□□ -0.29
SRSF4-206ENST00000605204 NHLRC2Q8NBF2 726 aa13.22□□□□□ -0.29
SRSF4-206ENST00000605204 SCRT2Q9NQ03 307 aa13.22□□□□□ -0.29
SRSF4-206ENST00000605204 A0A1B0GVY2 172 aa13.21□□□□□ -0.29
SRSF4-206ENST00000605204 K7EP13 123 aa13.21□□□□□ -0.29
SRSF4-206ENST00000605204 SIVA1O15304 175 aa13.21□□□□□ -0.29
SRSF4-206ENST00000605204 ZFP82Q8N141 532 aa13.21□□□□□ -0.29
SRSF4-206ENST00000605204 SLC25A29Q8N8R3 303 aa13.21□□□□□ -0.29
SRSF4-206ENST00000605204 PARLQ9H300 379 aa13.21□□□□□ -0.29
SRSF4-206ENST00000605204 NXPH4O95158 308 aa13.2□□□□□ -0.3
SRSF4-206ENST00000605204 BIN3Q9NQY0 253 aa13.2□□□□□ -0.3
SRSF4-206ENST00000605204 GNG4P50150 75 aa13.2□□□□□ -0.3
SRSF4-206ENST00000605204 CENPWQ5EE01 88 aa13.2□□□□□ -0.3
SRSF4-206ENST00000605204 ALKAL2Q6UX46 152 aa13.2□□□□□ -0.3
SRSF4-206ENST00000605204 HSPG2P98160 4391 aa13.19□□□□□ -0.3
SRSF4-206ENST00000605204 TMSB15BA0A087X1C1 80 aa13.19□□□□□ -0.3
SRSF4-206ENST00000605204 GRIFINA4D1Z8 144 aa13.19□□□□□ -0.3
SRSF4-206ENST00000605204 DERL1Q9BUN8 251 aa13.19□□□□□ -0.3
SRSF4-206ENST00000605204 DMRTA1Q5VZB9 504 aa13.18□□□□□ -0.3
SRSF4-206ENST00000605204 PRR27Q6MZM9 219 aa13.18□□□□□ -0.3
SRSF4-206ENST00000605204 MED9Q9NWA0 146 aa13.18□□□□□ -0.3
SRSF4-206ENST00000605204 TRAV9-2A0A087WT02 112 aa13.17□□□□□ -0.3
SRSF4-206ENST00000605204 A0A1B0GVG6 124 aa13.17□□□□□ -0.3
SRSF4-206ENST00000605204 DAZAP1Q96EP5 407 aaKnown RBP13.17□□□□□ -0.3
SRSF4-206ENST00000605204 SFRP2Q96HF1 295 aa13.17□□□□□ -0.3
SRSF4-206ENST00000605204 IGHV3-73A0A0B4J1V6 119 aa13.16□□□□□ -0.3
SRSF4-206ENST00000605204 M0R381 172 aa13.16□□□□□ -0.3
SRSF4-206ENST00000605204 OR5AL1P0C617 328 aa13.16□□□□□ -0.3
SRSF4-206ENST00000605204 RPS20P60866 119 aaKnown RBP13.16□□□□□ -0.3
SRSF4-206ENST00000605204 UFSP1Q6NVU6 142 aa13.16□□□□□ -0.3
SRSF4-206ENST00000605204 ZNF575Q86XF7 245 aa13.16□□□□□ -0.3
SRSF4-206ENST00000605204 LYPD6BQ8NI32 183 aa13.16□□□□□ -0.3
SRSF4-206ENST00000605204 LOC100131303A0A0U1RQF7 123 aa13.15□□□□□ -0.3
SRSF4-206ENST00000605204 XKRY2A2RUG3 117 aa13.15□□□□□ -0.3
SRSF4-206ENST00000605204 SNAI2O43623 268 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms