RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 PTH2Q96A98 100 aa11.24□□□□□ -0.61
PPFIA3-213ENST00000602905 H3BNG1 76 aa11.23□□□□□ -0.61
PPFIA3-213ENST00000602905 CIDEAO60543 219 aa11.23□□□□□ -0.61
PPFIA3-213ENST00000602905 ARMS2P0C7Q2 107 aa11.23□□□□□ -0.61
PPFIA3-213ENST00000602905 RAB14P61106 215 aa11.23□□□□□ -0.61
PPFIA3-213ENST00000602905 PCNPQ8WW12 178 aaKnown RBP11.23□□□□□ -0.61
PPFIA3-213ENST00000602905 PARLQ9H300 379 aa11.23□□□□□ -0.61
PPFIA3-213ENST00000602905 PRO0255Q9UI72 69 aa11.23□□□□□ -0.61
PPFIA3-213ENST00000602905 HHLA3Q9XRX5 114 aa11.23□□□□□ -0.61
PPFIA3-213ENST00000602905 PHLDA3Q9Y5J5 127 aa11.23□□□□□ -0.61
PPFIA3-213ENST00000602905 PGPEP1LA6NFU8 196 aa11.22□□□□□ -0.61
PPFIA3-213ENST00000602905 PAX4O43316 350 aa11.22□□□□□ -0.61
PPFIA3-213ENST00000602905 CXCL1P09341 107 aa11.22□□□□□ -0.61
PPFIA3-213ENST00000602905 SFTA3P0C7M3 94 aa11.22□□□□□ -0.61
PPFIA3-213ENST00000602905 PIK3CD-AS1Q5SR53 167 aa11.22□□□□□ -0.61
PPFIA3-213ENST00000602905 LYSTQ99698 3801 aa11.22□□□□□ -0.61
PPFIA3-213ENST00000602905 KMT2CQ8NEZ4 4911 aaKnown RBP11.22□□□□□ -0.61
PPFIA3-213ENST00000602905 ALMS1Q8TCU4 4167 aa11.21□□□□□ -0.61
PPFIA3-213ENST00000602905 XKRY2A2RUG3 117 aa11.21□□□□□ -0.61
PPFIA3-213ENST00000602905 IGLV2-8P01709 118 aa11.21□□□□□ -0.61
PPFIA3-213ENST00000602905 P01737 135 aa11.21□□□□□ -0.61
PPFIA3-213ENST00000602905 MED14OSP0DP75 135 aa11.21□□□□□ -0.61
PPFIA3-213ENST00000602905 RPS20P60866 119 aaKnown RBP11.21□□□□□ -0.61
PPFIA3-213ENST00000602905 FHL2Q14192 279 aa11.21□□□□□ -0.61
PPFIA3-213ENST00000602905 PEA15Q15121 130 aa11.21□□□□□ -0.61
PPFIA3-213ENST00000602905 ZNF479Q96JC4 524 aa11.21□□□□□ -0.61
PPFIA3-213ENST00000602905 TRBV20OR9-2A0A075B6H5 130 aa11.2□□□□□ -0.62
PPFIA3-213ENST00000602905 A8MWV9 139 aa11.2□□□□□ -0.62
PPFIA3-213ENST00000602905 RS1O15537 224 aa11.2□□□□□ -0.62
PPFIA3-213ENST00000602905 RPL19P84098 196 aaKnown RBP11.2□□□□□ -0.62
PPFIA3-213ENST00000602905 ZFP82Q8N141 532 aa11.2□□□□□ -0.62
PPFIA3-213ENST00000602905 POM121L12Q8N7R1 296 aa11.2□□□□□ -0.62
PPFIA3-213ENST00000602905 SRP19P09132 144 aaKnown RBP11.19□□□□□ -0.62
PPFIA3-213ENST00000602905 CRYBA4P53673 196 aa11.19□□□□□ -0.62
PPFIA3-213ENST00000602905 CCL18P55774 89 aa11.19□□□□□ -0.62
PPFIA3-213ENST00000602905 RNF212Q495C1 297 aa11.19□□□□□ -0.62
PPFIA3-213ENST00000602905 CFAP126Q5VTH2 177 aa11.19□□□□□ -0.62
PPFIA3-213ENST00000602905 OR2D3Q8NGH3 330 aa11.19□□□□□ -0.62
PPFIA3-213ENST00000602905 SMIM7Q9BQ49 75 aa11.19□□□□□ -0.62
PPFIA3-213ENST00000602905 ICOSQ9Y6W8 199 aa11.19□□□□□ -0.62
PPFIA3-213ENST00000602905 C19orf71A6NCJ1 209 aa11.18□□□□□ -0.62
PPFIA3-213ENST00000602905 ZNF727A8MUV8 499 aa11.18□□□□□ -0.62
PPFIA3-213ENST00000602905 M0R381 172 aa11.18□□□□□ -0.62
PPFIA3-213ENST00000602905 OCC1Q8TAD7 63 aa11.18□□□□□ -0.62
PPFIA3-213ENST00000602905 VSIG2Q96IQ7 327 aa11.18□□□□□ -0.62
PPFIA3-213ENST00000602905 SMDT1Q9H4I9 107 aa11.18□□□□□ -0.62
PPFIA3-213ENST00000602905 SCRT2Q9NQ03 307 aa11.18□□□□□ -0.62
PPFIA3-213ENST00000602905 MRPL23Q16540 153 aaKnown RBP11.17□□□□□ -0.62
PPFIA3-213ENST00000602905 DMRTA1Q5VZB9 504 aa11.17□□□□□ -0.62
PPFIA3-213ENST00000602905 LY96Q9Y6Y9 160 aa11.17□□□□□ -0.62
PPFIA3-213ENST00000602905 RHODO00212 210 aa11.16□□□□□ -0.62
PPFIA3-213ENST00000602905 OR5AL1P0C617 328 aa11.16□□□□□ -0.62
PPFIA3-213ENST00000602905 FAM3BP58499 235 aaPredicted RBP11.16□□□□□ -0.62
PPFIA3-213ENST00000602905 FAM74A3Q4VXF1 159 aa11.16□□□□□ -0.62
PPFIA3-213ENST00000602905 SPANXN1Q5VSR9 72 aa11.16□□□□□ -0.62
PPFIA3-213ENST00000602905 PRADC1Q9BSG0 188 aa11.16□□□□□ -0.62
PPFIA3-213ENST00000602905 A0A096LPF7 62 aa11.15□□□□□ -0.62
PPFIA3-213ENST00000602905 IGHV3-73A0A0B4J1V6 119 aa11.15□□□□□ -0.62
PPFIA3-213ENST00000602905 SNAI2O43623 268 aa11.15□□□□□ -0.62
PPFIA3-213ENST00000602905 GATA1P15976 413 aaPredicted RBP11.15□□□□□ -0.62
PPFIA3-213ENST00000602905 ZFP2Q6ZN57 461 aa11.15□□□□□ -0.62
PPFIA3-213ENST00000602905 ZNF575Q86XF7 245 aa11.15□□□□□ -0.62
PPFIA3-213ENST00000602905 FER1L6-AS1Q8NA97 138 aa11.15□□□□□ -0.62
PPFIA3-213ENST00000602905 NUDT10Q8NFP7 164 aa11.15□□□□□ -0.62
PPFIA3-213ENST00000602905 NUDT11Q96G61 164 aa11.15□□□□□ -0.62
PPFIA3-213ENST00000602905 TPPP3Q9BW30 176 aa11.15□□□□□ -0.62
PPFIA3-213ENST00000602905 DNAH1Q9P2D7 4330 aa11.14□□□□□ -0.63
PPFIA3-213ENST00000602905 SACSQ9NZJ4 4579 aa11.14□□□□□ -0.63
PPFIA3-213ENST00000602905 K7EN84 100 aa11.14□□□□□ -0.63
PPFIA3-213ENST00000602905 GYPEP15421 78 aa11.14□□□□□ -0.63
PPFIA3-213ENST00000602905 SRIP30626 198 aa11.14□□□□□ -0.63
PPFIA3-213ENST00000602905 RHOHQ15669 191 aa11.14□□□□□ -0.63
PPFIA3-213ENST00000602905 SFRP2Q96HF1 295 aa11.14□□□□□ -0.63
PPFIA3-213ENST00000602905 SSBP4Q9BWG4 385 aaPredicted RBP11.14□□□□□ -0.63
PPFIA3-213ENST00000602905 RPP21Q9H633 154 aaKnown RBP11.14□□□□□ -0.63
PPFIA3-213ENST00000602905 TRBV6-4A0A1B0GX49 114 aa11.13□□□□□ -0.63
PPFIA3-213ENST00000602905 A0A1W2PPQ1 181 aa11.13□□□□□ -0.63
PPFIA3-213ENST00000602905 GATCO43716 136 aaKnown RBP11.13□□□□□ -0.63
PPFIA3-213ENST00000602905 GZMBP10144 247 aa11.13□□□□□ -0.63
PPFIA3-213ENST00000602905 ERVFC1-1P60608 527 aa11.13□□□□□ -0.63
PPFIA3-213ENST00000602905 TMEM241Q24JQ0 296 aa11.13□□□□□ -0.63
PPFIA3-213ENST00000602905 FAM74A4Q5TZK3 123 aa11.13□□□□□ -0.63
PPFIA3-213ENST00000602905 SH2D6Q7Z4S9 175 aa11.13□□□□□ -0.63
PPFIA3-213ENST00000602905 OR10AG1Q8NH19 301 aa11.13□□□□□ -0.63
PPFIA3-213ENST00000602905 RNASE7Q9H1E1 156 aaKnown RBP11.13□□□□□ -0.63
PPFIA3-213ENST00000602905 F2Z2F3 143 aa11.12□□□□□ -0.63
PPFIA3-213ENST00000602905 K7EQD1 137 aa11.12□□□□□ -0.63
PPFIA3-213ENST00000602905 CACNG7P62955 275 aa11.12□□□□□ -0.63
PPFIA3-213ENST00000602905 FAM231DQ6ZW35 169 aa11.12□□□□□ -0.63
PPFIA3-213ENST00000602905 NEGR1Q7Z3B1 354 aa11.12□□□□□ -0.63
PPFIA3-213ENST00000602905 SLC25A29Q8N8R3 303 aa11.12□□□□□ -0.63
PPFIA3-213ENST00000602905 JPT2Q9H910 190 aa11.12□□□□□ -0.63
PPFIA3-213ENST00000602905 A0A087WWL8 130 aa11.11□□□□□ -0.63
PPFIA3-213ENST00000602905 MUC21A0A0G2JKD1 596 aa11.11□□□□□ -0.63
PPFIA3-213ENST00000602905 MUC21A0A140T8X8 626 aa11.11□□□□□ -0.63
PPFIA3-213ENST00000602905 NXPH4O95158 308 aa11.11□□□□□ -0.63
PPFIA3-213ENST00000602905 SMIM17P0DL12 118 aa11.11□□□□□ -0.63
PPFIA3-213ENST00000602905 SSTP61278 116 aa11.11□□□□□ -0.63
PPFIA3-213ENST00000602905 SOHLH1Q5JUK2 328 aa11.11□□□□□ -0.63
PPFIA3-213ENST00000602905 CLLU1Q5K131 121 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms