RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 TEX261Q6UWH6 196 aa6.05□□□□□ -1.44
SSBP4-208ENST00000600628 TXNDC17Q9BRA2 123 aa6.05□□□□□ -1.44
SSBP4-208ENST00000600628 MANBALQ9NQG1 85 aa6.05□□□□□ -1.44
SSBP4-208ENST00000600628 IL36BQ9NZH7 164 aa6.05□□□□□ -1.44
SSBP4-208ENST00000600628 HHLA3Q9XRX5 114 aa6.05□□□□□ -1.44
SSBP4-208ENST00000600628 MRPS16Q9Y3D3 137 aaKnown RBP6.05□□□□□ -1.44
SSBP4-208ENST00000600628 KIAA1109Q2LD37 5005 aa6.04□□□□□ -1.44
SSBP4-208ENST00000600628 SCO2A0A1W2PP80 73 aa6.04□□□□□ -1.44
SSBP4-208ENST00000600628 PGPEP1LA6NFU8 196 aa6.04□□□□□ -1.44
SSBP4-208ENST00000600628 RS1O15537 224 aa6.04□□□□□ -1.44
SSBP4-208ENST00000600628 CIDEAO60543 219 aa6.04□□□□□ -1.44
SSBP4-208ENST00000600628 IGLV2-8P01709 118 aa6.04□□□□□ -1.44
SSBP4-208ENST00000600628 SFTA3P0C7M3 94 aa6.04□□□□□ -1.44
SSBP4-208ENST00000600628 GATA1P15976 413 aaPredicted RBP6.04□□□□□ -1.44
SSBP4-208ENST00000600628 ZNF506Q5JVG8 444 aa6.04□□□□□ -1.44
SSBP4-208ENST00000600628 CFAP126Q5VTH2 177 aa6.04□□□□□ -1.44
SSBP4-208ENST00000600628 CST9LP1Q5W188 147 aa6.04□□□□□ -1.44
SSBP4-208ENST00000600628 EIF5AL1Q6IS14 154 aaKnown RBP6.04□□□□□ -1.44
SSBP4-208ENST00000600628 KRTAP1-5Q9BYS1 174 aa6.04□□□□□ -1.44
SSBP4-208ENST00000600628 NAGKQ9UJ70 344 aa6.04□□□□□ -1.44
SSBP4-208ENST00000600628 HERC2O95714 4834 aa6.04□□□□□ -1.44
SSBP4-208ENST00000600628 HSPG2P98160 4391 aa6.04□□□□□ -1.44
SSBP4-208ENST00000600628 NBDYA0A0U1RRE5 68 aa6.03□□□□□ -1.44
SSBP4-208ENST00000600628 LINC00862A6NCI5 91 aa6.03□□□□□ -1.44
SSBP4-208ENST00000600628 PRSS29PA6NIE9 313 aa6.03□□□□□ -1.44
SSBP4-208ENST00000600628 K7EQD1 137 aa6.03□□□□□ -1.44
SSBP4-208ENST00000600628 PAX4O43316 350 aa6.03□□□□□ -1.44
SSBP4-208ENST00000600628 SH2D1AO60880 128 aa6.03□□□□□ -1.44
SSBP4-208ENST00000600628 NXPH4O95158 308 aa6.03□□□□□ -1.44
SSBP4-208ENST00000600628 CXCL1P09341 107 aa6.03□□□□□ -1.44
SSBP4-208ENST00000600628 LINC00694P0DN24 101 aa6.03□□□□□ -1.44
SSBP4-208ENST00000600628 ZNF876PQ49A33 203 aa6.03□□□□□ -1.44
SSBP4-208ENST00000600628 SOHLH1Q5JUK2 328 aa6.03□□□□□ -1.44
SSBP4-208ENST00000600628 CLLU1Q5K131 121 aa6.03□□□□□ -1.44
SSBP4-208ENST00000600628 FAM162BQ5T6X4 162 aa6.03□□□□□ -1.44
SSBP4-208ENST00000600628 APOBP04114 4563 aaKnown RBP6.02□□□□□ -1.45
SSBP4-208ENST00000600628 TRBV20OR9-2A0A075B6H5 130 aa6.02□□□□□ -1.45
SSBP4-208ENST00000600628 IGHV3-53P01767 116 aa6.02□□□□□ -1.45
SSBP4-208ENST00000600628 BTF3P20290 206 aaKnown RBP6.02□□□□□ -1.45
SSBP4-208ENST00000600628 TIRAPP58753 221 aa6.02□□□□□ -1.45
SSBP4-208ENST00000600628 UBE2G1P62253 170 aa6.02□□□□□ -1.45
SSBP4-208ENST00000600628 MRPL23Q16540 153 aaKnown RBP6.02□□□□□ -1.45
SSBP4-208ENST00000600628 C1orf134Q5TEV5 83 aa6.02□□□□□ -1.45
SSBP4-208ENST00000600628 ZFP2Q6ZN57 461 aa6.02□□□□□ -1.45
SSBP4-208ENST00000600628 DERL1Q9BUN8 251 aa6.02□□□□□ -1.45
SSBP4-208ENST00000600628 SSBP4Q9BWG4 385 aaPredicted RBP6.02□□□□□ -1.45
SSBP4-208ENST00000600628 Q9H8V8 135 aa6.02□□□□□ -1.45
SSBP4-208ENST00000600628 ICOSQ9Y6W8 199 aa6.02□□□□□ -1.45
SSBP4-208ENST00000600628 A0A1B0GV50 99 aa6.01□□□□□ -1.45
SSBP4-208ENST00000600628 TRBV6-4A0A1B0GX49 114 aa6.01□□□□□ -1.45
SSBP4-208ENST00000600628 A0A1W2PPQ1 181 aa6.01□□□□□ -1.45
SSBP4-208ENST00000600628 B4DEV8 164 aa6.01□□□□□ -1.45
SSBP4-208ENST00000600628 NDUFS6O75380 124 aaKnown RBP6.01□□□□□ -1.45
SSBP4-208ENST00000600628 ORM1P02763 201 aa6.01□□□□□ -1.45
SSBP4-208ENST00000600628 MED14OSP0DP75 135 aa6.01□□□□□ -1.45
SSBP4-208ENST00000600628 AKR1C3P42330 323 aa6.01□□□□□ -1.45
SSBP4-208ENST00000600628 RPL35P42766 123 aaKnown RBP6.01□□□□□ -1.45
SSBP4-208ENST00000600628 MEF2BQ02080 365 aaPredicted RBP6.01□□□□□ -1.45
SSBP4-208ENST00000600628 LYPD5Q6UWN5 251 aa6.01□□□□□ -1.45
SSBP4-208ENST00000600628 NEGR1Q7Z3B1 354 aa6.01□□□□□ -1.45
SSBP4-208ENST00000600628 SLC25A29Q8N8R3 303 aa6.01□□□□□ -1.45
SSBP4-208ENST00000600628 OR4C5Q8NGB2 326 aa6.01□□□□□ -1.45
SSBP4-208ENST00000600628 SMIM12Q96EX1 92 aa6.01□□□□□ -1.45
SSBP4-208ENST00000600628 PARLQ9H300 379 aa6.01□□□□□ -1.45
SSBP4-208ENST00000600628 TRGV4A0A0C4DH28 118 aa6□□□□□ -1.45
SSBP4-208ENST00000600628 C19orf71A6NCJ1 209 aa6□□□□□ -1.45
SSBP4-208ENST00000600628 SNAI2O43623 268 aa6□□□□□ -1.45
SSBP4-208ENST00000600628 PDE6DO43924 150 aa6□□□□□ -1.45
SSBP4-208ENST00000600628 ARMS2P0C7Q2 107 aa6□□□□□ -1.45
SSBP4-208ENST00000600628 BCL2P10415 239 aa6□□□□□ -1.45
SSBP4-208ENST00000600628 ASIPP42127 132 aa6□□□□□ -1.45
SSBP4-208ENST00000600628 DMRTA1Q5VZB9 504 aa6□□□□□ -1.45
SSBP4-208ENST00000600628 Q6ZRN7 208 aaPredicted RBP6□□□□□ -1.45
SSBP4-208ENST00000600628 Q6ZSN1 163 aa6□□□□□ -1.45
SSBP4-208ENST00000600628 BAGE2Q86Y30 109 aa6□□□□□ -1.45
SSBP4-208ENST00000600628 MED9Q9NWA0 146 aa6□□□□□ -1.45
SSBP4-208ENST00000600628 GNG13Q9P2W3 67 aa6□□□□□ -1.45
SSBP4-208ENST00000600628 LOC100131303A0A0U1RQF7 123 aa5.99□□□□□ -1.45
SSBP4-208ENST00000600628 A8MWV9 139 aa5.99□□□□□ -1.45
SSBP4-208ENST00000600628 C9JCJ5 164 aa5.99□□□□□ -1.45
SSBP4-208ENST00000600628 TEX46H3BTG2 121 aa5.99□□□□□ -1.45
SSBP4-208ENST00000600628 H3BVH4 76 aa5.99□□□□□ -1.45
SSBP4-208ENST00000600628 CRYGDP07320 174 aa5.99□□□□□ -1.45
SSBP4-208ENST00000600628 OR5AL1P0C617 328 aa5.99□□□□□ -1.45
SSBP4-208ENST00000600628 MGST1P10620 155 aaKnown RBP5.99□□□□□ -1.45
SSBP4-208ENST00000600628 GYPEP15421 78 aa5.99□□□□□ -1.45
SSBP4-208ENST00000600628 TAGLN2P37802 199 aaKnown RBP5.99□□□□□ -1.45
SSBP4-208ENST00000600628 C6orf223Q8N319 242 aa5.99□□□□□ -1.45
SSBP4-208ENST00000600628 NHLRC2Q8NBF2 726 aa5.99□□□□□ -1.45
SSBP4-208ENST00000600628 SFRP2Q96HF1 295 aa5.99□□□□□ -1.45
SSBP4-208ENST00000600628 SAMD10Q9BYL1 202 aa5.99□□□□□ -1.45
SSBP4-208ENST00000600628 JPT2Q9H910 190 aa5.99□□□□□ -1.45
SSBP4-208ENST00000600628 Q9UF83 564 aa5.99□□□□□ -1.45
SSBP4-208ENST00000600628 RYR1P21817 5038 aa5.98□□□□□ -1.45
SSBP4-208ENST00000600628 K7EP13 123 aa5.98□□□□□ -1.45
SSBP4-208ENST00000600628 M0R036 132 aa5.98□□□□□ -1.45
SSBP4-208ENST00000600628 IGLC6P0CF74 106 aa5.98□□□□□ -1.45
SSBP4-208ENST00000600628 ALKAL2Q6UX46 152 aa5.98□□□□□ -1.45
SSBP4-208ENST00000600628 SH2D6Q7Z4S9 175 aa5.98□□□□□ -1.45
SSBP4-208ENST00000600628 VAX2Q9UIW0 290 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms