RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 ARMS2P0C7Q2 107 aa11.89□□□□□ -0.51
USHBP1-210ENST00000600286 ZNF876PQ49A33 203 aa11.89□□□□□ -0.51
USHBP1-210ENST00000600286 Q6ZTC4 211 aa11.89□□□□□ -0.51
USHBP1-210ENST00000600286 Q6ZTI0 123 aa11.89□□□□□ -0.51
USHBP1-210ENST00000600286 FAM231DQ6ZW35 169 aa11.89□□□□□ -0.51
USHBP1-210ENST00000600286 NDUFAF3Q9BU61 184 aa11.89□□□□□ -0.51
USHBP1-210ENST00000600286 RNASE7Q9H1E1 156 aaKnown RBP11.89□□□□□ -0.51
USHBP1-210ENST00000600286 MRPL16Q9NX20 251 aaKnown RBP11.89□□□□□ -0.51
USHBP1-210ENST00000600286 DEFB131BA0A096LNP1 70 aa11.88□□□□□ -0.51
USHBP1-210ENST00000600286 H3BVH4 76 aa11.88□□□□□ -0.51
USHBP1-210ENST00000600286 MED14OSP0DP75 135 aa11.88□□□□□ -0.51
USHBP1-210ENST00000600286 HTN3P15516 51 aa11.88□□□□□ -0.51
USHBP1-210ENST00000600286 RPL19P84098 196 aaKnown RBP11.88□□□□□ -0.51
USHBP1-210ENST00000600286 RASL10AQ92737 203 aa11.88□□□□□ -0.51
USHBP1-210ENST00000600286 C9orf85Q96MD7 179 aa11.88□□□□□ -0.51
USHBP1-210ENST00000600286 RPP21Q9H633 154 aaKnown RBP11.88□□□□□ -0.51
USHBP1-210ENST00000600286 A0A1W2PPQ1 181 aa11.87□□□□□ -0.51
USHBP1-210ENST00000600286 A8MWL6 223 aa11.87□□□□□ -0.51
USHBP1-210ENST00000600286 RNASE3P12724 160 aaKnown RBP11.87□□□□□ -0.51
USHBP1-210ENST00000600286 RPL23P62829 140 aaKnown RBP11.87□□□□□ -0.51
USHBP1-210ENST00000600286 PTH2Q96A98 100 aa11.87□□□□□ -0.51
USHBP1-210ENST00000600286 OSTCQ9NRP0 149 aa11.87□□□□□ -0.51
USHBP1-210ENST00000600286 TMEM218A2RU14 115 aa11.86□□□□□ -0.51
USHBP1-210ENST00000600286 F5H768 121 aa11.86□□□□□ -0.51
USHBP1-210ENST00000600286 F8W036 122 aa11.86□□□□□ -0.51
USHBP1-210ENST00000600286 PNRC1Q12796 327 aaPredicted RBP11.86□□□□□ -0.51
USHBP1-210ENST00000600286 PIK3CD-AS1Q5SR53 167 aa11.86□□□□□ -0.51
USHBP1-210ENST00000600286 ZFAND6Q6FIF0 208 aa11.86□□□□□ -0.51
USHBP1-210ENST00000600286 CEMP1Q6PRD7 247 aaPredicted RBP11.86□□□□□ -0.51
USHBP1-210ENST00000600286 ZFP82Q8N141 532 aa11.86□□□□□ -0.51
USHBP1-210ENST00000600286 LINC00612Q8N6U2 182 aa11.86□□□□□ -0.51
USHBP1-210ENST00000600286 C18orf15Q96N68 181 aa11.86□□□□□ -0.51
USHBP1-210ENST00000600286 TPPP3Q9BW30 176 aa11.86□□□□□ -0.51
USHBP1-210ENST00000600286 DNAH1Q9P2D7 4330 aa11.86□□□□□ -0.51
USHBP1-210ENST00000600286 F2Z2F3 143 aa11.85□□□□□ -0.51
USHBP1-210ENST00000600286 CIDEAO60543 219 aa11.85□□□□□ -0.51
USHBP1-210ENST00000600286 SPANXN1Q5VSR9 72 aa11.85□□□□□ -0.51
USHBP1-210ENST00000600286 FER1L6-AS1Q8NA97 138 aa11.85□□□□□ -0.51
USHBP1-210ENST00000600286 OR4C5Q8NGB2 326 aa11.85□□□□□ -0.51
USHBP1-210ENST00000600286 OR10G8Q8NGN5 311 aa11.85□□□□□ -0.51
USHBP1-210ENST00000600286 ISOC2Q96AB3 205 aa11.85□□□□□ -0.51
USHBP1-210ENST00000600286 SFRP2Q96HF1 295 aa11.85□□□□□ -0.51
USHBP1-210ENST00000600286 OR5AL1P0C617 328 aa11.84□□□□□ -0.51
USHBP1-210ENST00000600286 SLAQ13239 276 aa11.84□□□□□ -0.51
USHBP1-210ENST00000600286 CT83Q5H943 113 aa11.84□□□□□ -0.51
USHBP1-210ENST00000600286 FAM210BQ96KR6 192 aa11.84□□□□□ -0.51
USHBP1-210ENST00000600286 TRAV4A0A0B4J268 109 aa11.83□□□□□ -0.52
USHBP1-210ENST00000600286 A8MWV9 139 aa11.83□□□□□ -0.52
USHBP1-210ENST00000600286 M0R381 172 aa11.83□□□□□ -0.52
USHBP1-210ENST00000600286 BORCS7Q96B45 105 aa11.83□□□□□ -0.52
USHBP1-210ENST00000600286 SCRT2Q9NQ03 307 aa11.83□□□□□ -0.52
USHBP1-210ENST00000600286 TRGV4A0A0C4DH28 118 aa11.82□□□□□ -0.52
USHBP1-210ENST00000600286 IGLL5B9A064 214 aa11.82□□□□□ -0.52
USHBP1-210ENST00000600286 PPP1R2P9O14990 202 aa11.82□□□□□ -0.52
USHBP1-210ENST00000600286 SNAI2O43623 268 aa11.82□□□□□ -0.52
USHBP1-210ENST00000600286 GZMBP10144 247 aa11.82□□□□□ -0.52
USHBP1-210ENST00000600286 CACNG7P62955 275 aa11.82□□□□□ -0.52
USHBP1-210ENST00000600286 SSBP4Q9BWG4 385 aaPredicted RBP11.82□□□□□ -0.52
USHBP1-210ENST00000600286 SEC11CQ9BY50 192 aa11.82□□□□□ -0.52
USHBP1-210ENST00000600286 IGHV3-53P01767 116 aa11.81□□□□□ -0.52
USHBP1-210ENST00000600286 MT-ND4LP03901 98 aa11.81□□□□□ -0.52
USHBP1-210ENST00000600286 TCTAP57738 103 aa11.81□□□□□ -0.52
USHBP1-210ENST00000600286 DMRTA1Q5VZB9 504 aa11.81□□□□□ -0.52
USHBP1-210ENST00000600286 FAM231BA6NCW3 169 aa11.8□□□□□ -0.52
USHBP1-210ENST00000600286 RS1O15537 224 aa11.8□□□□□ -0.52
USHBP1-210ENST00000600286 IGLC6P0CF74 106 aa11.8□□□□□ -0.52
USHBP1-210ENST00000600286 SMIM17P0DL12 118 aa11.8□□□□□ -0.52
USHBP1-210ENST00000600286 SSTP61278 116 aa11.8□□□□□ -0.52
USHBP1-210ENST00000600286 CASC10Q5T4H9 136 aa11.8□□□□□ -0.52
USHBP1-210ENST00000600286 WDR73Q6P4I2 378 aa11.8□□□□□ -0.52
USHBP1-210ENST00000600286 ZNF575Q86XF7 245 aa11.8□□□□□ -0.52
USHBP1-210ENST00000600286 TSKUQ8WUA8 353 aa11.8□□□□□ -0.52
USHBP1-210ENST00000600286 GFRA4Q9GZZ7 299 aa11.8□□□□□ -0.52
USHBP1-210ENST00000600286 HYDINQ4G0P3 5121 aa11.8□□□□□ -0.52
USHBP1-210ENST00000600286 TENM2Q9NT68 2774 aa11.79□□□□□ -0.52
USHBP1-210ENST00000600286 RHODO00212 210 aa11.79□□□□□ -0.52
USHBP1-210ENST00000600286 NDUFA5Q16718 116 aa11.79□□□□□ -0.52
USHBP1-210ENST00000600286 LYZL1Q6UWQ5 148 aa11.79□□□□□ -0.52
USHBP1-210ENST00000600286 OR10AG1Q8NH19 301 aa11.79□□□□□ -0.52
USHBP1-210ENST00000600286 CFAP126Q5VTH2 177 aa11.78□□□□□ -0.52
USHBP1-210ENST00000600286 SMIM15Q7Z3B0 74 aa11.78□□□□□ -0.52
USHBP1-210ENST00000600286 ANAPC16Q96DE5 110 aa11.78□□□□□ -0.52
USHBP1-210ENST00000600286 ZNF479Q96JC4 524 aa11.78□□□□□ -0.52
USHBP1-210ENST00000600286 PRO0255Q9UI72 69 aa11.78□□□□□ -0.52
USHBP1-210ENST00000600286 HHLA3Q9XRX5 114 aa11.78□□□□□ -0.52
USHBP1-210ENST00000600286 V9GYV3 84 aa11.78□□□□□ -0.52
USHBP1-210ENST00000600286 MUC21A0A0G2JKD1 596 aa11.77□□□□□ -0.53
USHBP1-210ENST00000600286 MUC21A0A140T8X8 626 aa11.77□□□□□ -0.53
USHBP1-210ENST00000600286 TRGC1P0CF51 173 aa11.77□□□□□ -0.53
USHBP1-210ENST00000600286 FOXA3P55318 350 aaPredicted RBP11.77□□□□□ -0.53
USHBP1-210ENST00000600286 ZFP2Q6ZN57 461 aa11.77□□□□□ -0.53
USHBP1-210ENST00000600286 C15orf53Q8NAA6 179 aa11.77□□□□□ -0.53
USHBP1-210ENST00000600286 AP1S3Q96PC3 154 aa11.77□□□□□ -0.53
USHBP1-210ENST00000600286 IGHV4-4A0A075B6R2 117 aa11.76□□□□□ -0.53
USHBP1-210ENST00000600286 PAX4O43316 350 aa11.76□□□□□ -0.53
USHBP1-210ENST00000600286 TWIST1Q15672 202 aa11.76□□□□□ -0.53
USHBP1-210ENST00000600286 TMEM88Q6PEY1 159 aa11.76□□□□□ -0.53
USHBP1-210ENST00000600286 PGLYRP4Q96LB8 373 aa11.76□□□□□ -0.53
USHBP1-210ENST00000600286 NAT8BQ9UHF3 227 aa11.76□□□□□ -0.53
USHBP1-210ENST00000600286 TRAV26-1A0A087WT03 109 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms