RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 CIDEAO60543 219 aa6.66□□□□□ -1.34
VRK3-215ENST00000599138 SH2D1AO60880 128 aa6.66□□□□□ -1.34
VRK3-215ENST00000599138 ORM1P02763 201 aa6.66□□□□□ -1.34
VRK3-215ENST00000599138 S100A9P06702 114 aaKnown RBP6.66□□□□□ -1.34
VRK3-215ENST00000599138 AKR1C3P42330 323 aa6.66□□□□□ -1.34
VRK3-215ENST00000599138 SULT1A2P50226 295 aa6.66□□□□□ -1.34
VRK3-215ENST00000599138 UBE2G1P62253 170 aa6.66□□□□□ -1.34
VRK3-215ENST00000599138 SOHLH1Q5JUK2 328 aa6.66□□□□□ -1.34
VRK3-215ENST00000599138 ZNF506Q5JVG8 444 aa6.66□□□□□ -1.34
VRK3-215ENST00000599138 FAM162BQ5T6X4 162 aa6.66□□□□□ -1.34
VRK3-215ENST00000599138 CFAP126Q5VTH2 177 aa6.66□□□□□ -1.34
VRK3-215ENST00000599138 LYPD5Q6UWN5 251 aa6.66□□□□□ -1.34
VRK3-215ENST00000599138 AKAP14Q86UN6 197 aa6.66□□□□□ -1.34
VRK3-215ENST00000599138 SLC51BQ86UW2 128 aa6.66□□□□□ -1.34
VRK3-215ENST00000599138 MLST8Q9BVC4 326 aa6.66□□□□□ -1.34
VRK3-215ENST00000599138 KIAA1109Q2LD37 5005 aa6.66□□□□□ -1.34
VRK3-215ENST00000599138 SCO2A0A1W2PP80 73 aa6.65□□□□□ -1.34
VRK3-215ENST00000599138 B4DEV8 164 aa6.65□□□□□ -1.34
VRK3-215ENST00000599138 C9JCJ5 164 aa6.65□□□□□ -1.34
VRK3-215ENST00000599138 GYPEP15421 78 aa6.65□□□□□ -1.34
VRK3-215ENST00000599138 ASIPP42127 132 aa6.65□□□□□ -1.34
VRK3-215ENST00000599138 LINC01559Q495D7 138 aa6.65□□□□□ -1.34
VRK3-215ENST00000599138 TTC32Q5I0X7 151 aa6.65□□□□□ -1.34
VRK3-215ENST00000599138 NEGR1Q7Z3B1 354 aa6.65□□□□□ -1.34
VRK3-215ENST00000599138 C6orf223Q8N319 242 aa6.65□□□□□ -1.34
VRK3-215ENST00000599138 C9orf62Q8N4C0 152 aa6.65□□□□□ -1.34
VRK3-215ENST00000599138 IL36BQ9NZH7 164 aa6.65□□□□□ -1.34
VRK3-215ENST00000599138 BTF3P20290 206 aaKnown RBP6.64□□□□□ -1.35
VRK3-215ENST00000599138 S100A4P26447 101 aaKnown RBP6.64□□□□□ -1.35
VRK3-215ENST00000599138 SRIP30626 198 aa6.64□□□□□ -1.35
VRK3-215ENST00000599138 C11orf52Q96A22 123 aa6.64□□□□□ -1.35
VRK3-215ENST00000599138 TXNDC17Q9BRA2 123 aa6.64□□□□□ -1.35
VRK3-215ENST00000599138 SCRT2Q9NQ03 307 aa6.64□□□□□ -1.35
VRK3-215ENST00000599138 MANBALQ9NQG1 85 aa6.64□□□□□ -1.35
VRK3-215ENST00000599138 HERC2O95714 4834 aa6.63□□□□□ -1.35
VRK3-215ENST00000599138 hCG_2014768A0A024R1R8 64 aa6.63□□□□□ -1.35
VRK3-215ENST00000599138 LOC100131303A0A0U1RQF7 123 aa6.63□□□□□ -1.35
VRK3-215ENST00000599138 TRBV6-4A0A1B0GX49 114 aa6.63□□□□□ -1.35
VRK3-215ENST00000599138 H3BVH4 76 aa6.63□□□□□ -1.35
VRK3-215ENST00000599138 M0R036 132 aa6.63□□□□□ -1.35
VRK3-215ENST00000599138 SIVA1O15304 175 aa6.63□□□□□ -1.35
VRK3-215ENST00000599138 NXPH4O95158 308 aa6.63□□□□□ -1.35
VRK3-215ENST00000599138 TIRAPP58753 221 aa6.63□□□□□ -1.35
VRK3-215ENST00000599138 UFSP1Q6NVU6 142 aa6.63□□□□□ -1.35
VRK3-215ENST00000599138 ZFP2Q6ZN57 461 aa6.63□□□□□ -1.35
VRK3-215ENST00000599138 SH2D6Q7Z4S9 175 aa6.63□□□□□ -1.35
VRK3-215ENST00000599138 BAGE2Q86Y30 109 aa6.63□□□□□ -1.35
VRK3-215ENST00000599138 SLC25A29Q8N8R3 303 aa6.63□□□□□ -1.35
VRK3-215ENST00000599138 NHLRC2Q8NBF2 726 aa6.63□□□□□ -1.35
VRK3-215ENST00000599138 PCNPQ8WW12 178 aaKnown RBP6.63□□□□□ -1.35
VRK3-215ENST00000599138 GNG13Q9P2W3 67 aa6.63□□□□□ -1.35
VRK3-215ENST00000599138 GRIFINA4D1Z8 144 aa6.62□□□□□ -1.35
VRK3-215ENST00000599138 A8MWV9 139 aa6.62□□□□□ -1.35
VRK3-215ENST00000599138 TEX46H3BTG2 121 aa6.62□□□□□ -1.35
VRK3-215ENST00000599138 ARMS2P0C7Q2 107 aa6.62□□□□□ -1.35
VRK3-215ENST00000599138 MGST1P10620 155 aaKnown RBP6.62□□□□□ -1.35
VRK3-215ENST00000599138 RPL35P42766 123 aaKnown RBP6.62□□□□□ -1.35
VRK3-215ENST00000599138 TNP2Q05952 138 aa6.62□□□□□ -1.35
VRK3-215ENST00000599138 DMRTA1Q5VZB9 504 aa6.62□□□□□ -1.35
VRK3-215ENST00000599138 Q6ZSN1 163 aa6.62□□□□□ -1.35
VRK3-215ENST00000599138 PARLQ9H300 379 aa6.62□□□□□ -1.35
VRK3-215ENST00000599138 IGHV3-73A0A0B4J1V6 119 aa6.61□□□□□ -1.35
VRK3-215ENST00000599138 CXCL1P09341 107 aa6.61□□□□□ -1.35
VRK3-215ENST00000599138 MED14OSP0DP75 135 aa6.61□□□□□ -1.35
VRK3-215ENST00000599138 RHOHQ15669 191 aa6.61□□□□□ -1.35
VRK3-215ENST00000599138 PRADC1Q9BSG0 188 aa6.61□□□□□ -1.35
VRK3-215ENST00000599138 DERL1Q9BUN8 251 aa6.61□□□□□ -1.35
VRK3-215ENST00000599138 SAMD10Q9BYL1 202 aa6.61□□□□□ -1.35
VRK3-215ENST00000599138 JPT2Q9H910 190 aa6.61□□□□□ -1.35
VRK3-215ENST00000599138 TMSB15BA0A087X1C1 80 aa6.6□□□□□ -1.35
VRK3-215ENST00000599138 A0A1B0GVG6 124 aa6.6□□□□□ -1.35
VRK3-215ENST00000599138 IGLV2-8P01709 118 aa6.6□□□□□ -1.35
VRK3-215ENST00000599138 DNAH10OSP0CZ25 163 aa6.6□□□□□ -1.35
VRK3-215ENST00000599138 LINC00694P0DN24 101 aa6.6□□□□□ -1.35
VRK3-215ENST00000599138 BCL2P10415 239 aa6.6□□□□□ -1.35
VRK3-215ENST00000599138 MEF2BQ02080 365 aaPredicted RBP6.6□□□□□ -1.35
VRK3-215ENST00000599138 Q6ZRN7 208 aaPredicted RBP6.6□□□□□ -1.35
VRK3-215ENST00000599138 WFDC10BQ8IUB3 73 aa6.6□□□□□ -1.35
VRK3-215ENST00000599138 SYT8Q8NBV8 401 aa6.6□□□□□ -1.35
VRK3-215ENST00000599138 SFRP2Q96HF1 295 aa6.6□□□□□ -1.35
VRK3-215ENST00000599138 SSBP4Q9BWG4 385 aaPredicted RBP6.6□□□□□ -1.35
VRK3-215ENST00000599138 LRP1BQ9NZR2 4599 aa6.6□□□□□ -1.35
VRK3-215ENST00000599138 K7EP13 123 aa6.59□□□□□ -1.35
VRK3-215ENST00000599138 RHODO00212 210 aa6.59□□□□□ -1.35
VRK3-215ENST00000599138 SNAI2O43623 268 aa6.59□□□□□ -1.35
VRK3-215ENST00000599138 PDE6DO43924 150 aa6.59□□□□□ -1.35
VRK3-215ENST00000599138 IFNA1P01562 189 aa6.59□□□□□ -1.35
VRK3-215ENST00000599138 CRYGDP07320 174 aa6.59□□□□□ -1.35
VRK3-215ENST00000599138 LINC00315P59091 139 aa6.59□□□□□ -1.35
VRK3-215ENST00000599138 RPL19P84098 196 aaKnown RBP6.59□□□□□ -1.35
VRK3-215ENST00000599138 CENPWQ5EE01 88 aa6.59□□□□□ -1.35
VRK3-215ENST00000599138 LYPD6BQ8NI32 183 aa6.59□□□□□ -1.35
VRK3-215ENST00000599138 SMIM12Q96EX1 92 aa6.59□□□□□ -1.35
VRK3-215ENST00000599138 VAX2Q9UIW0 290 aa6.59□□□□□ -1.35
VRK3-215ENST00000599138 PHLDA3Q9Y5J5 127 aa6.59□□□□□ -1.35
VRK3-215ENST00000599138 LY96Q9Y6Y9 160 aa6.59□□□□□ -1.35
VRK3-215ENST00000599138 TRBV20OR9-2A0A075B6H5 130 aa6.58□□□□□ -1.36
VRK3-215ENST00000599138 OR5AL1P0C617 328 aa6.58□□□□□ -1.36
VRK3-215ENST00000599138 TAGLN2P37802 199 aaKnown RBP6.58□□□□□ -1.36
VRK3-215ENST00000599138 ALKAL2Q6UX46 152 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms