RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 IL36BQ9NZH7 164 aa13.79□□□□□ -0.2
SHKBP1-214ENST00000597396 TRBV20OR9-2A0A075B6H5 130 aa13.78□□□□□ -0.2
SHKBP1-214ENST00000597396 TRAV4A0A0B4J268 109 aa13.78□□□□□ -0.2
SHKBP1-214ENST00000597396 TRGV4A0A0C4DH28 118 aa13.78□□□□□ -0.2
SHKBP1-214ENST00000597396 PGPEP1LA6NFU8 196 aa13.78□□□□□ -0.2
SHKBP1-214ENST00000597396 SFTA3P0C7M3 94 aa13.78□□□□□ -0.2
SHKBP1-214ENST00000597396 RPL19P84098 196 aaKnown RBP13.78□□□□□ -0.2
SHKBP1-214ENST00000597396 BIN3Q9NQY0 253 aa13.78□□□□□ -0.2
SHKBP1-214ENST00000597396 NDUFS6O75380 124 aaKnown RBP13.77□□□□□ -0.21
SHKBP1-214ENST00000597396 ARMS2P0C7Q2 107 aa13.77□□□□□ -0.21
SHKBP1-214ENST00000597396 P0DMU3 169 aa13.77□□□□□ -0.21
SHKBP1-214ENST00000597396 FAM231AP0DMU4 169 aa13.77□□□□□ -0.21
SHKBP1-214ENST00000597396 FAM231CP0DMU5 169 aa13.77□□□□□ -0.21
SHKBP1-214ENST00000597396 ZNF479Q96JC4 524 aa13.77□□□□□ -0.21
SHKBP1-214ENST00000597396 SLAQ13239 276 aa13.76□□□□□ -0.21
SHKBP1-214ENST00000597396 POM121L12Q8N7R1 296 aa13.76□□□□□ -0.21
SHKBP1-214ENST00000597396 PTH2Q96A98 100 aa13.76□□□□□ -0.21
SHKBP1-214ENST00000597396 CXCL1P09341 107 aa13.75□□□□□ -0.21
SHKBP1-214ENST00000597396 RAB14P61106 215 aa13.75□□□□□ -0.21
SHKBP1-214ENST00000597396 FHL2Q14192 279 aa13.75□□□□□ -0.21
SHKBP1-214ENST00000597396 UBE2DNLQ8IWF7 75 aa13.75□□□□□ -0.21
SHKBP1-214ENST00000597396 SYT8Q8NBV8 401 aa13.75□□□□□ -0.21
SHKBP1-214ENST00000597396 PRO0255Q9UI72 69 aa13.75□□□□□ -0.21
SHKBP1-214ENST00000597396 PHLDA3Q9Y5J5 127 aa13.75□□□□□ -0.21
SHKBP1-214ENST00000597396 H3BNG1 76 aa13.74□□□□□ -0.21
SHKBP1-214ENST00000597396 PAX4O43316 350 aa13.74□□□□□ -0.21
SHKBP1-214ENST00000597396 SRP19P09132 144 aaKnown RBP13.74□□□□□ -0.21
SHKBP1-214ENST00000597396 HHLA3Q9XRX5 114 aa13.74□□□□□ -0.21
SHKBP1-214ENST00000597396 BIRC6Q9NR09 4857 aa13.74□□□□□ -0.21
SHKBP1-214ENST00000597396 RS1O15537 224 aa13.73□□□□□ -0.21
SHKBP1-214ENST00000597396 P01737 135 aa13.73□□□□□ -0.21
SHKBP1-214ENST00000597396 OR2D3Q8NGH3 330 aa13.73□□□□□ -0.21
SHKBP1-214ENST00000597396 OCC1Q8TAD7 63 aa13.73□□□□□ -0.21
SHKBP1-214ENST00000597396 VSIG2Q96IQ7 327 aa13.73□□□□□ -0.21
SHKBP1-214ENST00000597396 SMIM7Q9BQ49 75 aa13.73□□□□□ -0.21
SHKBP1-214ENST00000597396 C19orf71A6NCJ1 209 aa13.72□□□□□ -0.21
SHKBP1-214ENST00000597396 MED14OSP0DP75 135 aa13.72□□□□□ -0.21
SHKBP1-214ENST00000597396 CRYBA4P53673 196 aa13.72□□□□□ -0.21
SHKBP1-214ENST00000597396 RPS20P60866 119 aaKnown RBP13.72□□□□□ -0.21
SHKBP1-214ENST00000597396 PEA15Q15121 130 aa13.72□□□□□ -0.21
SHKBP1-214ENST00000597396 PIK3CD-AS1Q5SR53 167 aa13.72□□□□□ -0.21
SHKBP1-214ENST00000597396 CFAP126Q5VTH2 177 aa13.72□□□□□ -0.21
SHKBP1-214ENST00000597396 ZNF575Q86XF7 245 aa13.72□□□□□ -0.21
SHKBP1-214ENST00000597396 ZNF727A8MUV8 499 aa13.71□□□□□ -0.21
SHKBP1-214ENST00000597396 A8MWV9 139 aa13.71□□□□□ -0.21
SHKBP1-214ENST00000597396 M0R381 172 aa13.71□□□□□ -0.21
SHKBP1-214ENST00000597396 CIDEAO60543 219 aa13.71□□□□□ -0.21
SHKBP1-214ENST00000597396 DMRTA1Q5VZB9 504 aa13.71□□□□□ -0.21
SHKBP1-214ENST00000597396 ZFP82Q8N141 532 aa13.71□□□□□ -0.21
SHKBP1-214ENST00000597396 SCRT2Q9NQ03 307 aa13.71□□□□□ -0.21
SHKBP1-214ENST00000597396 XKRY2A2RUG3 117 aa13.7□□□□□ -0.22
SHKBP1-214ENST00000597396 K7EN84 100 aa13.7□□□□□ -0.22
SHKBP1-214ENST00000597396 ICOSQ9Y6W8 199 aa13.7□□□□□ -0.22
SHKBP1-214ENST00000597396 IGHV3-73A0A0B4J1V6 119 aa13.69□□□□□ -0.22
SHKBP1-214ENST00000597396 NUDT10Q8NFP7 164 aa13.69□□□□□ -0.22
SHKBP1-214ENST00000597396 NUDT11Q96G61 164 aa13.69□□□□□ -0.22
SHKBP1-214ENST00000597396 LY96Q9Y6Y9 160 aa13.69□□□□□ -0.22
SHKBP1-214ENST00000597396 HYDINQ4G0P3 5121 aa13.69□□□□□ -0.22
SHKBP1-214ENST00000597396 SNAI2O43623 268 aa13.68□□□□□ -0.22
SHKBP1-214ENST00000597396 OR5AL1P0C617 328 aa13.68□□□□□ -0.22
SHKBP1-214ENST00000597396 GZMBP10144 247 aa13.68□□□□□ -0.22
SHKBP1-214ENST00000597396 GATA1P15976 413 aaPredicted RBP13.68□□□□□ -0.22
SHKBP1-214ENST00000597396 CCL18P55774 89 aa13.68□□□□□ -0.22
SHKBP1-214ENST00000597396 RNF212Q495C1 297 aa13.68□□□□□ -0.22
SHKBP1-214ENST00000597396 RNASE7Q9H1E1 156 aaKnown RBP13.68□□□□□ -0.22
SHKBP1-214ENST00000597396 SMDT1Q9H4I9 107 aa13.68□□□□□ -0.22
SHKBP1-214ENST00000597396 JPT2Q9H910 190 aa13.68□□□□□ -0.22
SHKBP1-214ENST00000597396 A0A096LPF7 62 aa13.67□□□□□ -0.22
SHKBP1-214ENST00000597396 SRSF3P84103 164 aaKnown RBP13.67□□□□□ -0.22
SHKBP1-214ENST00000597396 FER1L6-AS1Q8NA97 138 aa13.67□□□□□ -0.22
SHKBP1-214ENST00000597396 OR10AG1Q8NH19 301 aa13.67□□□□□ -0.22
SHKBP1-214ENST00000597396 TPPP3Q9BW30 176 aa13.67□□□□□ -0.22
SHKBP1-214ENST00000597396 SSBP4Q9BWG4 385 aaPredicted RBP13.67□□□□□ -0.22
SHKBP1-214ENST00000597396 GYPEP15421 78 aa13.66□□□□□ -0.22
SHKBP1-214ENST00000597396 MRPL23Q16540 153 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-214ENST00000597396 FAM74A3Q4VXF1 159 aa13.66□□□□□ -0.22
SHKBP1-214ENST00000597396 SPANXN1Q5VSR9 72 aa13.66□□□□□ -0.22
SHKBP1-214ENST00000597396 ZFP2Q6ZN57 461 aa13.66□□□□□ -0.22
SHKBP1-214ENST00000597396 RPP21Q9H633 154 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-214ENST00000597396 MUC21A0A0G2JKD1 596 aa13.65□□□□□ -0.22
SHKBP1-214ENST00000597396 MUC21A0A140T8X8 626 aa13.65□□□□□ -0.22
SHKBP1-214ENST00000597396 C9JQL5 133 aa13.65□□□□□ -0.22
SHKBP1-214ENST00000597396 RHODO00212 210 aa13.65□□□□□ -0.22
SHKBP1-214ENST00000597396 IFITM2Q01629 132 aa13.65□□□□□ -0.22
SHKBP1-214ENST00000597396 CLLU1Q5K131 121 aa13.65□□□□□ -0.22
SHKBP1-214ENST00000597396 FAM74A4Q5TZK3 123 aa13.65□□□□□ -0.22
SHKBP1-214ENST00000597396 SFRP2Q96HF1 295 aa13.65□□□□□ -0.22
SHKBP1-214ENST00000597396 PRADC1Q9BSG0 188 aa13.65□□□□□ -0.22
SHKBP1-214ENST00000597396 VPS13DQ5THJ4 4388 aa13.64□□□□□ -0.23
SHKBP1-214ENST00000597396 GATCO43716 136 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-214ENST00000597396 IGLC6P0CF74 106 aa13.64□□□□□ -0.23
SHKBP1-214ENST00000597396 SRIP30626 198 aa13.64□□□□□ -0.23
SHKBP1-214ENST00000597396 ERVFC1-1P60608 527 aa13.64□□□□□ -0.23
SHKBP1-214ENST00000597396 SSTP61278 116 aa13.64□□□□□ -0.23
SHKBP1-214ENST00000597396 RHOHQ15669 191 aa13.64□□□□□ -0.23
SHKBP1-214ENST00000597396 LINC01551Q86U37 167 aa13.64□□□□□ -0.23
SHKBP1-214ENST00000597396 SAMD10Q9BYL1 202 aa13.64□□□□□ -0.23
SHKBP1-214ENST00000597396 A0A087WWL8 130 aa13.63□□□□□ -0.23
SHKBP1-214ENST00000597396 TRBV6-4A0A1B0GX49 114 aa13.63□□□□□ -0.23
SHKBP1-214ENST00000597396 K7EQD1 137 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms