RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 STAG3L2P0CL84 134 aa10.56□□□□□ -0.72
LINC02560-201ENST00000596379 STAG3L3P0CL85 134 aa10.56□□□□□ -0.72
LINC02560-201ENST00000596379 MGST1P10620 155 aaKnown RBP10.56□□□□□ -0.72
LINC02560-201ENST00000596379 CDC34P49427 236 aaPredicted RBP10.56□□□□□ -0.72
LINC02560-201ENST00000596379 LAGE3Q14657 143 aa10.56□□□□□ -0.72
LINC02560-201ENST00000596379 PRNTQ86SH4 94 aa10.56□□□□□ -0.72
LINC02560-201ENST00000596379 GCHFRP30047 84 aa10.55□□□□□ -0.72
LINC02560-201ENST00000596379 SUMO1P63165 101 aaKnown RBP10.55□□□□□ -0.72
LINC02560-201ENST00000596379 FLI1Q01543 452 aaPredicted RBP10.55□□□□□ -0.72
LINC02560-201ENST00000596379 SMUG1Q53HV7 270 aa10.55□□□□□ -0.72
LINC02560-201ENST00000596379 SUN5Q8TC36 379 aa10.55□□□□□ -0.72
LINC02560-201ENST00000596379 RAB24Q969Q5 203 aa10.55□□□□□ -0.72
LINC02560-201ENST00000596379 EPDR1Q9UM22 224 aa10.55□□□□□ -0.72
LINC02560-201ENST00000596379 GAGE12JA6NER3 117 aa10.54□□□□□ -0.72
LINC02560-201ENST00000596379 GAGE1Q13065 139 aa10.54□□□□□ -0.72
LINC02560-201ENST00000596379 GAGE4Q13068 117 aa10.54□□□□□ -0.72
LINC02560-201ENST00000596379 GAGE5Q13069 117 aa10.54□□□□□ -0.72
LINC02560-201ENST00000596379 ZFP69Q49AA0 526 aa10.54□□□□□ -0.72
LINC02560-201ENST00000596379 GAGE13Q4V321 117 aa10.54□□□□□ -0.72
LINC02560-201ENST00000596379 HSD17B11Q8NBQ5 300 aa10.54□□□□□ -0.72
LINC02560-201ENST00000596379 TRAV8-3A0A0A6YYJ7 113 aa10.53□□□□□ -0.72
LINC02560-201ENST00000596379 LECT2O14960 151 aa10.53□□□□□ -0.72
LINC02560-201ENST00000596379 LGALSLQ3ZCW2 172 aaPredicted RBP10.53□□□□□ -0.72
LINC02560-201ENST00000596379 ZFP2Q6ZN57 461 aa10.53□□□□□ -0.72
LINC02560-201ENST00000596379 DAZ4Q86SG3 579 aaKnown RBP10.53□□□□□ -0.72
LINC02560-201ENST00000596379 OR2G3Q8NGZ4 309 aa10.53□□□□□ -0.72
LINC02560-201ENST00000596379 PARLQ9H300 379 aa10.53□□□□□ -0.72
LINC02560-201ENST00000596379 DAZ3Q9NR90 486 aaKnown RBP10.53□□□□□ -0.72
LINC02560-201ENST00000596379 Q9UF83 564 aa10.53□□□□□ -0.72
LINC02560-201ENST00000596379 IGKV3D-20A0A0C4DH25 116 aa10.52□□□□□ -0.73
LINC02560-201ENST00000596379 A8MWV9 139 aa10.52□□□□□ -0.73
LINC02560-201ENST00000596379 PLA2G1BP04054 148 aaKnown RBP10.52□□□□□ -0.73
LINC02560-201ENST00000596379 LINC00694P0DN24 101 aa10.52□□□□□ -0.73
LINC02560-201ENST00000596379 SAPCD1Q5SSQ6 148 aa10.52□□□□□ -0.73
LINC02560-201ENST00000596379 Q6ZSA8 131 aa10.52□□□□□ -0.73
LINC02560-201ENST00000596379 CYB561D1Q8N8Q1 229 aa10.52□□□□□ -0.73
LINC02560-201ENST00000596379 OR2T35Q8NGX2 323 aa10.52□□□□□ -0.73
LINC02560-201ENST00000596379 SH3BGRL3Q9H299 93 aa10.52□□□□□ -0.73
LINC02560-201ENST00000596379 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.51□□□□□ -0.73
LINC02560-201ENST00000596379 GGTLC3B5MD39 225 aa10.51□□□□□ -0.73
LINC02560-201ENST00000596379 S100A4P26447 101 aaKnown RBP10.51□□□□□ -0.73
LINC02560-201ENST00000596379 ATP6V0CP27449 155 aa10.51□□□□□ -0.73
LINC02560-201ENST00000596379 DEFA1P59665 94 aa10.51□□□□□ -0.73
LINC02560-201ENST00000596379 DEFA3P59666 94 aa10.51□□□□□ -0.73
LINC02560-201ENST00000596379 LINC00528Q8N1L1 170 aa10.51□□□□□ -0.73
LINC02560-201ENST00000596379 BAALCQ8WXS3 180 aa10.51□□□□□ -0.73
LINC02560-201ENST00000596379 LINC00479Q96M42 142 aa10.51□□□□□ -0.73
LINC02560-201ENST00000596379 PSMG3Q9BT73 122 aaPredicted RBP10.51□□□□□ -0.73
LINC02560-201ENST00000596379 SAMD10Q9BYL1 202 aa10.51□□□□□ -0.73
LINC02560-201ENST00000596379 JPT2Q9H910 190 aa10.51□□□□□ -0.73
LINC02560-201ENST00000596379 TMEM167BQ9NRX6 74 aa10.51□□□□□ -0.73
LINC02560-201ENST00000596379 CXorf1O96002 111 aa10.5□□□□□ -0.73
LINC02560-201ENST00000596379 TOR2AQ5JU69 321 aa10.5□□□□□ -0.73
LINC02560-201ENST00000596379 TRAV34A0A0B4J273 112 aa10.49□□□□□ -0.73
LINC02560-201ENST00000596379 FABP5P3A8MUU1 101 aa10.49□□□□□ -0.73
LINC02560-201ENST00000596379 MBP02144 154 aa10.49□□□□□ -0.73
LINC02560-201ENST00000596379 ASIPP42127 132 aa10.49□□□□□ -0.73
LINC02560-201ENST00000596379 SERF2P84101 59 aa10.49□□□□□ -0.73
LINC02560-201ENST00000596379 LINC01620Q4KN68 170 aa10.49□□□□□ -0.73
LINC02560-201ENST00000596379 PIK3CD-AS1Q5SR53 167 aa10.49□□□□□ -0.73
LINC02560-201ENST00000596379 C14orf178Q8N769 122 aaPredicted RBP10.49□□□□□ -0.73
LINC02560-201ENST00000596379 ACTR3CQ9C0K3 210 aaPredicted RBP10.49□□□□□ -0.73
LINC02560-201ENST00000596379 A0A087WWC5 75 aa10.48□□□□□ -0.73
LINC02560-201ENST00000596379 FGF8P55075 233 aaPredicted RBP10.48□□□□□ -0.73
LINC02560-201ENST00000596379 DMRTA1Q5VZB9 504 aa10.48□□□□□ -0.73
LINC02560-201ENST00000596379 UFSP1Q6NVU6 142 aa10.48□□□□□ -0.73
LINC02560-201ENST00000596379 COX11Q9Y6N1 276 aa10.48□□□□□ -0.73
LINC02560-201ENST00000596379 ARL2-SNX15V9GYD0 113 aa10.48□□□□□ -0.73
LINC02560-201ENST00000596379 A0A1W2PRE2 83 aa10.47□□□□□ -0.73
LINC02560-201ENST00000596379 KRTAP29-1A8MX34 341 aaPredicted RBP10.47□□□□□ -0.73
LINC02560-201ENST00000596379 DEFB104AQ8WTQ1 72 aa10.47□□□□□ -0.73
LINC02560-201ENST00000596379 DNAJC30Q96LL9 226 aa10.47□□□□□ -0.73
LINC02560-201ENST00000596379 AQP10Q96PS8 301 aa10.47□□□□□ -0.73
LINC02560-201ENST00000596379 IL36BQ9NZH7 164 aa10.47□□□□□ -0.73
LINC02560-201ENST00000596379 TNFSF18Q9UNG2 199 aa10.47□□□□□ -0.73
LINC02560-201ENST00000596379 RBFOX3A6NFN3 312 aa10.46□□□□□ -0.73
LINC02560-201ENST00000596379 H3BVH4 76 aa10.46□□□□□ -0.73
LINC02560-201ENST00000596379 SCXQ7RTU7 201 aa10.46□□□□□ -0.73
LINC02560-201ENST00000596379 Q8N976 141 aa10.46□□□□□ -0.73
LINC02560-201ENST00000596379 RMI2Q96E14 147 aa10.46□□□□□ -0.73
LINC02560-201ENST00000596379 ALG5Q9Y673 324 aa10.46□□□□□ -0.73
LINC02560-201ENST00000596379 URGCP-MRPS24S4R325 110 aa10.46□□□□□ -0.73
LINC02560-201ENST00000596379 A6NHS1 94 aa10.45□□□□□ -0.74
LINC02560-201ENST00000596379 B4DEV8 164 aa10.45□□□□□ -0.74
LINC02560-201ENST00000596379 IFNA7P01567 189 aa10.45□□□□□ -0.74
LINC02560-201ENST00000596379 ARMS2P0C7Q2 107 aa10.45□□□□□ -0.74
LINC02560-201ENST00000596379 NIT1Q86X76 327 aa10.45□□□□□ -0.74
LINC02560-201ENST00000596379 KLK12Q9UKR0 248 aa10.45□□□□□ -0.74
LINC02560-201ENST00000596379 IGKV2D-24A0A075B6R9 120 aa10.44□□□□□ -0.74
LINC02560-201ENST00000596379 RNF222A6NCQ9 220 aa10.44□□□□□ -0.74
LINC02560-201ENST00000596379 CRIP1P50238 77 aa10.44□□□□□ -0.74
LINC02560-201ENST00000596379 UBE2G2P60604 165 aa10.44□□□□□ -0.74
LINC02560-201ENST00000596379 FAM74A4Q5TZK3 123 aa10.44□□□□□ -0.74
LINC02560-201ENST00000596379 SYT8Q8NBV8 401 aa10.44□□□□□ -0.74
LINC02560-201ENST00000596379 GRIFINA4D1Z8 144 aa10.43□□□□□ -0.74
LINC02560-201ENST00000596379 KRBOX1C9JBD0 128 aa10.43□□□□□ -0.74
LINC02560-201ENST00000596379 M0R036 132 aa10.43□□□□□ -0.74
LINC02560-201ENST00000596379 RHODO00212 210 aa10.43□□□□□ -0.74
LINC02560-201ENST00000596379 PEX7O00628 323 aa10.43□□□□□ -0.74
LINC02560-201ENST00000596379 ZNF726P1Q15940 193 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms