RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 MED9Q9NWA0 146 aa12.7□□□□□ -0.38
ZNF558-204ENST00000596172 TRGV4A0A0C4DH28 118 aa12.69□□□□□ -0.38
ZNF558-204ENST00000596172 PGPEP1LA6NFU8 196 aa12.69□□□□□ -0.38
ZNF558-204ENST00000596172 C9JCJ5 164 aa12.69□□□□□ -0.38
ZNF558-204ENST00000596172 M0R036 132 aa12.69□□□□□ -0.38
ZNF558-204ENST00000596172 PAX4O43316 350 aa12.69□□□□□ -0.38
ZNF558-204ENST00000596172 CCL18P55774 89 aa12.69□□□□□ -0.38
ZNF558-204ENST00000596172 RBFOX3A6NFN3 312 aa12.68□□□□□ -0.38
ZNF558-204ENST00000596172 RS1O15537 224 aa12.68□□□□□ -0.38
ZNF558-204ENST00000596172 CXCL1P09341 107 aa12.68□□□□□ -0.38
ZNF558-204ENST00000596172 SFTA3P0C7M3 94 aa12.68□□□□□ -0.38
ZNF558-204ENST00000596172 CENPWQ5EE01 88 aa12.68□□□□□ -0.38
ZNF558-204ENST00000596172 ZNF506Q5JVG8 444 aa12.68□□□□□ -0.38
ZNF558-204ENST00000596172 SCRT2Q9NQ03 307 aa12.68□□□□□ -0.38
ZNF558-204ENST00000596172 A0A096LPF7 62 aa12.67□□□□□ -0.38
ZNF558-204ENST00000596172 RAB19A4D1S5 217 aa12.67□□□□□ -0.38
ZNF558-204ENST00000596172 NDUFS6O75380 124 aaKnown RBP12.67□□□□□ -0.38
ZNF558-204ENST00000596172 IGLV2-8P01709 118 aa12.67□□□□□ -0.38
ZNF558-204ENST00000596172 ARMS2P0C7Q2 107 aa12.67□□□□□ -0.38
ZNF558-204ENST00000596172 GNG4P50150 75 aa12.67□□□□□ -0.38
ZNF558-204ENST00000596172 CFAP126Q5VTH2 177 aa12.67□□□□□ -0.38
ZNF558-204ENST00000596172 GRIFINA4D1Z8 144 aa12.66□□□□□ -0.38
ZNF558-204ENST00000596172 TMEM250H0YL14 139 aa12.66□□□□□ -0.38
ZNF558-204ENST00000596172 TEX261Q6UWH6 196 aa12.66□□□□□ -0.38
ZNF558-204ENST00000596172 ICOSQ9Y6W8 199 aa12.66□□□□□ -0.38
ZNF558-204ENST00000596172 DNAH10Q8IVF4 4471 aa12.65□□□□□ -0.38
ZNF558-204ENST00000596172 TRBV20OR9-2A0A075B6H5 130 aa12.65□□□□□ -0.38
ZNF558-204ENST00000596172 A8MWV9 139 aa12.65□□□□□ -0.38
ZNF558-204ENST00000596172 H3BVH4 76 aa12.65□□□□□ -0.38
ZNF558-204ENST00000596172 MED14OSP0DP75 135 aa12.65□□□□□ -0.38
ZNF558-204ENST00000596172 GATA1P15976 413 aaPredicted RBP12.65□□□□□ -0.38
ZNF558-204ENST00000596172 BIN3Q9NQY0 253 aa12.65□□□□□ -0.38
ZNF558-204ENST00000596172 LINC00588Q9Y4M8 146 aa12.65□□□□□ -0.38
ZNF558-204ENST00000596172 TMSB15BA0A087X1C1 80 aa12.64□□□□□ -0.39
ZNF558-204ENST00000596172 MRPL23Q16540 153 aaKnown RBP12.64□□□□□ -0.39
ZNF558-204ENST00000596172 ESRGQ1W209 222 aa12.64□□□□□ -0.39
ZNF558-204ENST00000596172 PRR27Q6MZM9 219 aa12.64□□□□□ -0.39
ZNF558-204ENST00000596172 ZFP2Q6ZN57 461 aa12.64□□□□□ -0.39
ZNF558-204ENST00000596172 SYT8Q8NBV8 401 aa12.64□□□□□ -0.39
ZNF558-204ENST00000596172 DMRTA1Q5VZB9 504 aa12.63□□□□□ -0.39
ZNF558-204ENST00000596172 ZNRF2Q8NHG8 242 aa12.63□□□□□ -0.39
ZNF558-204ENST00000596172 FAM210AQ96ND0 272 aa12.63□□□□□ -0.39
ZNF558-204ENST00000596172 PHLDA3Q9Y5J5 127 aa12.63□□□□□ -0.39
ZNF558-204ENST00000596172 TRBV6-4A0A1B0GX49 114 aa12.62□□□□□ -0.39
ZNF558-204ENST00000596172 C19orf71A6NCJ1 209 aa12.62□□□□□ -0.39
ZNF558-204ENST00000596172 MGST1P10620 155 aaKnown RBP12.62□□□□□ -0.39
ZNF558-204ENST00000596172 RPL19P84098 196 aaKnown RBP12.62□□□□□ -0.39
ZNF558-204ENST00000596172 DAZAP1Q96EP5 407 aaKnown RBP12.62□□□□□ -0.39
ZNF558-204ENST00000596172 UPK3BQ9BT76 320 aa12.62□□□□□ -0.39
ZNF558-204ENST00000596172 SSBP4Q9BWG4 385 aaPredicted RBP12.62□□□□□ -0.39
ZNF558-204ENST00000596172 K7EQD1 137 aa12.61□□□□□ -0.39
ZNF558-204ENST00000596172 OR5AL1P0C617 328 aa12.61□□□□□ -0.39
ZNF558-204ENST00000596172 TOR2AQ5JU69 321 aa12.61□□□□□ -0.39
ZNF558-204ENST00000596172 ZFP82Q8N141 532 aa12.61□□□□□ -0.39
ZNF558-204ENST00000596172 EIF5A2Q9GZV4 153 aaKnown RBP12.61□□□□□ -0.39
ZNF558-204ENST00000596172 PARLQ9H300 379 aa12.61□□□□□ -0.39
ZNF558-204ENST00000596172 MRPS16Q9Y3D3 137 aaKnown RBP12.61□□□□□ -0.39
ZNF558-204ENST00000596172 DNAH2Q9P225 4427 aa12.6□□□□□ -0.39
ZNF558-204ENST00000596172 SNAI2O43623 268 aa12.6□□□□□ -0.39
ZNF558-204ENST00000596172 GYPEP15421 78 aa12.6□□□□□ -0.39
ZNF558-204ENST00000596172 RPS20P60866 119 aaKnown RBP12.6□□□□□ -0.39
ZNF558-204ENST00000596172 UFSP1Q6NVU6 142 aa12.6□□□□□ -0.39
ZNF558-204ENST00000596172 Q6ZR54 194 aa12.6□□□□□ -0.39
ZNF558-204ENST00000596172 NEGR1Q7Z3B1 354 aa12.6□□□□□ -0.39
ZNF558-204ENST00000596172 SH2D6Q7Z4S9 175 aa12.6□□□□□ -0.39
ZNF558-204ENST00000596172 SLC25A29Q8N8R3 303 aa12.6□□□□□ -0.39
ZNF558-204ENST00000596172 PCNPQ8WW12 178 aaKnown RBP12.6□□□□□ -0.39
ZNF558-204ENST00000596172 SFRP2Q96HF1 295 aa12.6□□□□□ -0.39
ZNF558-204ENST00000596172 RHODO00212 210 aa12.59□□□□□ -0.39
ZNF558-204ENST00000596172 NXPH4O95158 308 aa12.59□□□□□ -0.39
ZNF558-204ENST00000596172 IGLV2-18A0A075B6J9 118 aa12.58□□□□□ -0.4
ZNF558-204ENST00000596172 M0R381 172 aa12.58□□□□□ -0.4
ZNF558-204ENST00000596172 P01737 135 aa12.58□□□□□ -0.4
ZNF558-204ENST00000596172 SRIP30626 198 aa12.58□□□□□ -0.4
ZNF558-204ENST00000596172 RHOHQ15669 191 aa12.58□□□□□ -0.4
ZNF558-204ENST00000596172 LYPD5Q6UWN5 251 aa12.58□□□□□ -0.4
ZNF558-204ENST00000596172 OCC1Q8TAD7 63 aa12.58□□□□□ -0.4
ZNF558-204ENST00000596172 PRADC1Q9BSG0 188 aa12.58□□□□□ -0.4
ZNF558-204ENST00000596172 Q9H8V8 135 aa12.58□□□□□ -0.4
ZNF558-204ENST00000596172 JPT2Q9H910 190 aa12.58□□□□□ -0.4
ZNF558-204ENST00000596172 IGHV3-73A0A0B4J1V6 119 aa12.57□□□□□ -0.4
ZNF558-204ENST00000596172 XKRY2A2RUG3 117 aa12.57□□□□□ -0.4
ZNF558-204ENST00000596172 OR2D3Q8NGH3 330 aa12.57□□□□□ -0.4
ZNF558-204ENST00000596172 SAMD10Q9BYL1 202 aa12.57□□□□□ -0.4
ZNF558-204ENST00000596172 LY96Q9Y6Y9 160 aa12.57□□□□□ -0.4
ZNF558-204ENST00000596172 NACAE9PAV3 2078 aa12.57□□□□□ -0.4
ZNF558-204ENST00000596172 K7EN84 100 aa12.56□□□□□ -0.4
ZNF558-204ENST00000596172 M0R2N4 97 aa12.56□□□□□ -0.4
ZNF558-204ENST00000596172 CRYGDP07320 174 aa12.56□□□□□ -0.4
ZNF558-204ENST00000596172 SRP19P09132 144 aaKnown RBP12.56□□□□□ -0.4
ZNF558-204ENST00000596172 NUDT10Q8NFP7 164 aa12.56□□□□□ -0.4
ZNF558-204ENST00000596172 OR10AG1Q8NH19 301 aa12.56□□□□□ -0.4
ZNF558-204ENST00000596172 NUDT11Q96G61 164 aa12.56□□□□□ -0.4
ZNF558-204ENST00000596172 LOC100131303A0A0U1RQF7 123 aa12.55□□□□□ -0.4
ZNF558-204ENST00000596172 NBDYA0A0U1RRE5 68 aa12.55□□□□□ -0.4
ZNF558-204ENST00000596172 IGLC6P0CF74 106 aa12.55□□□□□ -0.4
ZNF558-204ENST00000596172 TIRAPP58753 221 aa12.55□□□□□ -0.4
ZNF558-204ENST00000596172 Q6ZSN1 163 aa12.55□□□□□ -0.4
ZNF558-204ENST00000596172 DNAH17Q9UFH2 4485 aa12.54□□□□□ -0.4
ZNF558-204ENST00000596172 SPANXN1Q5VSR9 72 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms