RNA–Protein interactions for RNA: ENST00000595974.5

TRIM28-206, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-206ENST00000595974 NEGR1Q7Z3B1 354 aa11.17□□□□□ -0.62
TRIM28-206ENST00000595974 hCG_2014768A0A024R1R8 64 aa11.16□□□□□ -0.62
TRIM28-206ENST00000595974 SCO2A0A1W2PP80 73 aa11.16□□□□□ -0.62
TRIM28-206ENST00000595974 TEX46H3BTG2 121 aa11.16□□□□□ -0.62
TRIM28-206ENST00000595974 K7EQD1 137 aa11.16□□□□□ -0.62
TRIM28-206ENST00000595974 RS1O15537 224 aa11.16□□□□□ -0.62
TRIM28-206ENST00000595974 SH2D1AO60880 128 aa11.16□□□□□ -0.62
TRIM28-206ENST00000595974 GYPEP15421 78 aa11.16□□□□□ -0.62
TRIM28-206ENST00000595974 GATA1P15976 413 aaPredicted RBP11.16□□□□□ -0.62
TRIM28-206ENST00000595974 SRIP30626 198 aa11.16□□□□□ -0.62
TRIM28-206ENST00000595974 CRIP1P50238 77 aa11.16□□□□□ -0.62
TRIM28-206ENST00000595974 ZNF674Q2M3X9 581 aa11.16□□□□□ -0.62
TRIM28-206ENST00000595974 PIK3CD-AS1Q5SR53 167 aa11.16□□□□□ -0.62
TRIM28-206ENST00000595974 C6orf223Q8N319 242 aa11.16□□□□□ -0.62
TRIM28-206ENST00000595974 IL36BQ9NZH7 164 aa11.16□□□□□ -0.62
TRIM28-206ENST00000595974 A0A1B0GVY2 172 aa11.15□□□□□ -0.62
TRIM28-206ENST00000595974 A0A1W2PPQ1 181 aa11.15□□□□□ -0.62
TRIM28-206ENST00000595974 PGPEP1LA6NFU8 196 aa11.15□□□□□ -0.62
TRIM28-206ENST00000595974 DNLZQ5SXM8 178 aa11.15□□□□□ -0.62
TRIM28-206ENST00000595974 CFAP126Q5VTH2 177 aa11.15□□□□□ -0.62
TRIM28-206ENST00000595974 TXNDC17Q9BRA2 123 aa11.15□□□□□ -0.62
TRIM28-206ENST00000595974 PKHD1P08F94 4074 aa11.15□□□□□ -0.62
TRIM28-206ENST00000595974 KRBOX1C9JBD0 128 aa11.14□□□□□ -0.63
TRIM28-206ENST00000595974 M0R036 132 aa11.14□□□□□ -0.63
TRIM28-206ENST00000595974 LINC01559Q495D7 138 aa11.14□□□□□ -0.63
TRIM28-206ENST00000595974 GNG13Q9P2W3 67 aa11.14□□□□□ -0.63
TRIM28-206ENST00000595974 H3BVH4 76 aa11.13□□□□□ -0.63
TRIM28-206ENST00000595974 SIVA1O15304 175 aa11.13□□□□□ -0.63
TRIM28-206ENST00000595974 NXPH4O95158 308 aa11.13□□□□□ -0.63
TRIM28-206ENST00000595974 CCL20P78556 96 aa11.13□□□□□ -0.63
TRIM28-206ENST00000595974 LYPD5Q6UWN5 251 aa11.13□□□□□ -0.63
TRIM28-206ENST00000595974 SH2D6Q7Z4S9 175 aa11.13□□□□□ -0.63
TRIM28-206ENST00000595974 C9orf62Q8N4C0 152 aa11.13□□□□□ -0.63
TRIM28-206ENST00000595974 C11orf52Q96A22 123 aa11.13□□□□□ -0.63
TRIM28-206ENST00000595974 KRTAP1-5Q9BYS1 174 aa11.13□□□□□ -0.63
TRIM28-206ENST00000595974 TRBV6-4A0A1B0GX49 114 aa11.12□□□□□ -0.63
TRIM28-206ENST00000595974 A8MWV9 139 aa11.12□□□□□ -0.63
TRIM28-206ENST00000595974 BTF3P20290 206 aaKnown RBP11.12□□□□□ -0.63
TRIM28-206ENST00000595974 RHOHQ15669 191 aa11.12□□□□□ -0.63
TRIM28-206ENST00000595974 NHLRC2Q8NBF2 726 aa11.12□□□□□ -0.63
TRIM28-206ENST00000595974 IFNA1P01562 189 aa11.11□□□□□ -0.63
TRIM28-206ENST00000595974 MGST1P10620 155 aaKnown RBP11.11□□□□□ -0.63
TRIM28-206ENST00000595974 ZFP2Q6ZN57 461 aa11.11□□□□□ -0.63
TRIM28-206ENST00000595974 BAGE2Q86Y30 109 aa11.11□□□□□ -0.63
TRIM28-206ENST00000595974 SLC25A29Q8N8R3 303 aa11.11□□□□□ -0.63
TRIM28-206ENST00000595974 SYT8Q8NBV8 401 aa11.11□□□□□ -0.63
TRIM28-206ENST00000595974 PRADC1Q9BSG0 188 aa11.11□□□□□ -0.63
TRIM28-206ENST00000595974 MLST8Q9BVC4 326 aa11.11□□□□□ -0.63
TRIM28-206ENST00000595974 PARLQ9H300 379 aa11.11□□□□□ -0.63
TRIM28-206ENST00000595974 LOC100131303A0A0U1RQF7 123 aa11.1□□□□□ -0.63
TRIM28-206ENST00000595974 GRIFINA4D1Z8 144 aa11.1□□□□□ -0.63
TRIM28-206ENST00000595974 ARMS2P0C7Q2 107 aa11.1□□□□□ -0.63
TRIM28-206ENST00000595974 RPL35P42766 123 aaKnown RBP11.1□□□□□ -0.63
TRIM28-206ENST00000595974 TMSB15BA0A087X1C1 80 aa11.09□□□□□ -0.63
TRIM28-206ENST00000595974 IGHV3-73A0A0B4J1V6 119 aa11.09□□□□□ -0.63
TRIM28-206ENST00000595974 CXCL1P09341 107 aa11.09□□□□□ -0.63
TRIM28-206ENST00000595974 TIRAPP58753 221 aa11.09□□□□□ -0.63
TRIM28-206ENST00000595974 MEF2BQ02080 365 aaPredicted RBP11.09□□□□□ -0.63
TRIM28-206ENST00000595974 SCRT2Q9NQ03 307 aa11.09□□□□□ -0.63
TRIM28-206ENST00000595974 PHLDA3Q9Y5J5 127 aa11.09□□□□□ -0.63
TRIM28-206ENST00000595974 PKD1P98161 4303 aa11.08□□□□□ -0.64
TRIM28-206ENST00000595974 RHODO00212 210 aa11.08□□□□□ -0.64
TRIM28-206ENST00000595974 PDE6DO43924 150 aa11.08□□□□□ -0.64
TRIM28-206ENST00000595974 MED14OSP0DP75 135 aa11.08□□□□□ -0.64
TRIM28-206ENST00000595974 ZNF575Q86XF7 245 aa11.08□□□□□ -0.64
TRIM28-206ENST00000595974 DERL1Q9BUN8 251 aa11.08□□□□□ -0.64
TRIM28-206ENST00000595974 BCL2P10415 239 aa11.07□□□□□ -0.64
TRIM28-206ENST00000595974 TAGLN2P37802 199 aaKnown RBP11.07□□□□□ -0.64
TRIM28-206ENST00000595974 TNP2Q05952 138 aa11.07□□□□□ -0.64
TRIM28-206ENST00000595974 DMRTA1Q5VZB9 504 aa11.07□□□□□ -0.64
TRIM28-206ENST00000595974 ZFP82Q8N141 532 aa11.07□□□□□ -0.64
TRIM28-206ENST00000595974 DNAH11Q96DT5 4516 aa11.06□□□□□ -0.64
TRIM28-206ENST00000595974 K7EP13 123 aa11.06□□□□□ -0.64
TRIM28-206ENST00000595974 CENPWQ5EE01 88 aa11.06□□□□□ -0.64
TRIM28-206ENST00000595974 PRR27Q6MZM9 219 aa11.06□□□□□ -0.64
TRIM28-206ENST00000595974 UFSP1Q6NVU6 142 aa11.06□□□□□ -0.64
TRIM28-206ENST00000595974 WFDC10BQ8IUB3 73 aa11.06□□□□□ -0.64
TRIM28-206ENST00000595974 SMIM12Q96EX1 92 aa11.06□□□□□ -0.64
TRIM28-206ENST00000595974 JPT2Q9H910 190 aa11.06□□□□□ -0.64
TRIM28-206ENST00000595974 LY96Q9Y6Y9 160 aa11.06□□□□□ -0.64
TRIM28-206ENST00000595974 M0R381 172 aa11.05□□□□□ -0.64
TRIM28-206ENST00000595974 LINC00315P59091 139 aa11.05□□□□□ -0.64
TRIM28-206ENST00000595974 RPL19P84098 196 aaKnown RBP11.05□□□□□ -0.64
TRIM28-206ENST00000595974 SFRP2Q96HF1 295 aa11.05□□□□□ -0.64
TRIM28-206ENST00000595974 SAMD10Q9BYL1 202 aa11.05□□□□□ -0.64
TRIM28-206ENST00000595974 VAX2Q9UIW0 290 aa11.05□□□□□ -0.64
TRIM28-206ENST00000595974 DYNC1H1Q14204 4646 aaKnown RBP11.05□□□□□ -0.64
TRIM28-206ENST00000595974 TRAV9-2A0A087WT02 112 aa11.04□□□□□ -0.64
TRIM28-206ENST00000595974 DNAH10OSP0CZ25 163 aa11.04□□□□□ -0.64
TRIM28-206ENST00000595974 ALKAL2Q6UX46 152 aa11.04□□□□□ -0.64
TRIM28-206ENST00000595974 Q6ZSN1 163 aa11.04□□□□□ -0.64
TRIM28-206ENST00000595974 BOLA1Q9Y3E2 137 aa11.04□□□□□ -0.64
TRIM28-206ENST00000595974 A0A1B0GVG6 124 aa11.03□□□□□ -0.64
TRIM28-206ENST00000595974 SNAI2O43623 268 aa11.03□□□□□ -0.64
TRIM28-206ENST00000595974 LINC00694P0DN24 101 aa11.03□□□□□ -0.64
TRIM28-206ENST00000595974 EVI2AP22794 236 aa11.03□□□□□ -0.64
TRIM28-206ENST00000595974 GNG4P50150 75 aa11.03□□□□□ -0.64
TRIM28-206ENST00000595974 BLOC1S1P78537 153 aa11.03□□□□□ -0.64
TRIM28-206ENST00000595974 FAM74A4Q5TZK3 123 aa11.03□□□□□ -0.64
TRIM28-206ENST00000595974 ATP6V0E2Q8NHE4 81 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms