RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 KRBOX1C9JBD0 128 aa7.56□□□□□ -1.2
SHKBP1-206ENST00000595523 M0R036 132 aa7.56□□□□□ -1.2
SHKBP1-206ENST00000595523 RS1O15537 224 aa7.56□□□□□ -1.2
SHKBP1-206ENST00000595523 DNLZQ5SXM8 178 aa7.56□□□□□ -1.2
SHKBP1-206ENST00000595523 FAM162BQ5T6X4 162 aa7.56□□□□□ -1.2
SHKBP1-206ENST00000595523 CFAP126Q5VTH2 177 aa7.56□□□□□ -1.2
SHKBP1-206ENST00000595523 C11orf52Q96A22 123 aa7.56□□□□□ -1.2
SHKBP1-206ENST00000595523 PTH2Q96A98 100 aa7.56□□□□□ -1.2
SHKBP1-206ENST00000595523 DERL1Q9BUN8 251 aa7.56□□□□□ -1.2
SHKBP1-206ENST00000595523 MLST8Q9BVC4 326 aa7.56□□□□□ -1.2
SHKBP1-206ENST00000595523 MANBALQ9NQG1 85 aa7.56□□□□□ -1.2
SHKBP1-206ENST00000595523 DYNC1H1Q14204 4646 aaKnown RBP7.55□□□□□ -1.2
SHKBP1-206ENST00000595523 LOC100131303A0A0U1RQF7 123 aa7.55□□□□□ -1.2
SHKBP1-206ENST00000595523 A0A1B0GVY2 172 aa7.55□□□□□ -1.2
SHKBP1-206ENST00000595523 GRIFINA4D1Z8 144 aa7.55□□□□□ -1.2
SHKBP1-206ENST00000595523 K7EQD1 137 aa7.55□□□□□ -1.2
SHKBP1-206ENST00000595523 ORM1P02763 201 aa7.55□□□□□ -1.2
SHKBP1-206ENST00000595523 GATA1P15976 413 aaPredicted RBP7.55□□□□□ -1.2
SHKBP1-206ENST00000595523 ASIPP42127 132 aa7.55□□□□□ -1.2
SHKBP1-206ENST00000595523 NKX2-5P52952 324 aaPredicted RBP7.55□□□□□ -1.2
SHKBP1-206ENST00000595523 LINC01559Q495D7 138 aa7.55□□□□□ -1.2
SHKBP1-206ENST00000595523 Q9H8V8 135 aa7.55□□□□□ -1.2
SHKBP1-206ENST00000595523 IL36BQ9NZH7 164 aa7.55□□□□□ -1.2
SHKBP1-206ENST00000595523 KIAA1109Q2LD37 5005 aa7.55□□□□□ -1.2
SHKBP1-206ENST00000595523 H3BVH4 76 aa7.54□□□□□ -1.2
SHKBP1-206ENST00000595523 S100A9P06702 114 aaKnown RBP7.54□□□□□ -1.2
SHKBP1-206ENST00000595523 GYPEP15421 78 aa7.54□□□□□ -1.2
SHKBP1-206ENST00000595523 RPL35P42766 123 aaKnown RBP7.54□□□□□ -1.2
SHKBP1-206ENST00000595523 MRPL23Q16540 153 aaKnown RBP7.54□□□□□ -1.2
SHKBP1-206ENST00000595523 LYPD5Q6UWN5 251 aa7.54□□□□□ -1.2
SHKBP1-206ENST00000595523 LINC00336Q6ZUF6 198 aa7.54□□□□□ -1.2
SHKBP1-206ENST00000595523 TMSB15BA0A087X1C1 80 aa7.53□□□□□ -1.2
SHKBP1-206ENST00000595523 IGHV3-73A0A0B4J1V6 119 aa7.53□□□□□ -1.2
SHKBP1-206ENST00000595523 ARMS2P0C7Q2 107 aa7.53□□□□□ -1.2
SHKBP1-206ENST00000595523 S100A4P26447 101 aaKnown RBP7.53□□□□□ -1.2
SHKBP1-206ENST00000595523 RPL19P84098 196 aaKnown RBP7.53□□□□□ -1.2
SHKBP1-206ENST00000595523 C1orf134Q5TEV5 83 aa7.53□□□□□ -1.2
SHKBP1-206ENST00000595523 DMRTA1Q5VZB9 504 aa7.53□□□□□ -1.2
SHKBP1-206ENST00000595523 ALKAL2Q6UX46 152 aa7.53□□□□□ -1.2
SHKBP1-206ENST00000595523 BAGE2Q86Y30 109 aa7.53□□□□□ -1.2
SHKBP1-206ENST00000595523 JPT2Q9H910 190 aa7.53□□□□□ -1.2
SHKBP1-206ENST00000595523 SCRT2Q9NQ03 307 aa7.53□□□□□ -1.2
SHKBP1-206ENST00000595523 HERC2O95714 4834 aa7.52□□□□□ -1.21
SHKBP1-206ENST00000595523 PRSS29PA6NIE9 313 aa7.52□□□□□ -1.21
SHKBP1-206ENST00000595523 NXPH4O95158 308 aa7.52□□□□□ -1.21
SHKBP1-206ENST00000595523 IGLV2-8P01709 118 aa7.52□□□□□ -1.21
SHKBP1-206ENST00000595523 BCL2P10415 239 aa7.52□□□□□ -1.21
SHKBP1-206ENST00000595523 SRIP30626 198 aa7.52□□□□□ -1.21
SHKBP1-206ENST00000595523 MEF2BQ02080 365 aaPredicted RBP7.52□□□□□ -1.21
SHKBP1-206ENST00000595523 PIK3CD-AS1Q5SR53 167 aa7.52□□□□□ -1.21
SHKBP1-206ENST00000595523 UFSP1Q6NVU6 142 aa7.52□□□□□ -1.21
SHKBP1-206ENST00000595523 Q6ZSN1 163 aa7.52□□□□□ -1.21
SHKBP1-206ENST00000595523 NEGR1Q7Z3B1 354 aa7.52□□□□□ -1.21
SHKBP1-206ENST00000595523 SLC25A29Q8N8R3 303 aa7.52□□□□□ -1.21
SHKBP1-206ENST00000595523 TXNDC17Q9BRA2 123 aa7.52□□□□□ -1.21
SHKBP1-206ENST00000595523 SAMD10Q9BYL1 202 aa7.52□□□□□ -1.21
SHKBP1-206ENST00000595523 PARLQ9H300 379 aa7.52□□□□□ -1.21
SHKBP1-206ENST00000595523 BOLA1Q9Y3E2 137 aa7.52□□□□□ -1.21
SHKBP1-206ENST00000595523 TRBV20OR9-2A0A075B6H5 130 aa7.51□□□□□ -1.21
SHKBP1-206ENST00000595523 TRBV6-4A0A1B0GX49 114 aa7.51□□□□□ -1.21
SHKBP1-206ENST00000595523 TEX46H3BTG2 121 aa7.51□□□□□ -1.21
SHKBP1-206ENST00000595523 CENPWQ5EE01 88 aa7.51□□□□□ -1.21
SHKBP1-206ENST00000595523 C6orf223Q8N319 242 aa7.51□□□□□ -1.21
SHKBP1-206ENST00000595523 RAB19A4D1S5 217 aa7.5□□□□□ -1.21
SHKBP1-206ENST00000595523 A8MWV9 139 aa7.5□□□□□ -1.21
SHKBP1-206ENST00000595523 SIVA1O15304 175 aa7.5□□□□□ -1.21
SHKBP1-206ENST00000595523 CIDEAO60543 219 aa7.5□□□□□ -1.21
SHKBP1-206ENST00000595523 IFNA1P01562 189 aa7.5□□□□□ -1.21
SHKBP1-206ENST00000595523 PRR27Q6MZM9 219 aa7.5□□□□□ -1.21
SHKBP1-206ENST00000595523 ZFP2Q6ZN57 461 aa7.5□□□□□ -1.21
SHKBP1-206ENST00000595523 LYPD6BQ8NI32 183 aa7.5□□□□□ -1.21
SHKBP1-206ENST00000595523 PCNPQ8WW12 178 aaKnown RBP7.5□□□□□ -1.21
SHKBP1-206ENST00000595523 Q9UF83 564 aa7.5□□□□□ -1.21
SHKBP1-206ENST00000595523 VAX2Q9UIW0 290 aa7.5□□□□□ -1.21
SHKBP1-206ENST00000595523 DNAH5Q8TE73 4624 aa7.5□□□□□ -1.21
SHKBP1-206ENST00000595523 A0A1W2PPQ1 181 aa7.49□□□□□ -1.21
SHKBP1-206ENST00000595523 M0R381 172 aa7.49□□□□□ -1.21
SHKBP1-206ENST00000595523 PDE6DO43924 150 aa7.49□□□□□ -1.21
SHKBP1-206ENST00000595523 CXCL1P09341 107 aa7.49□□□□□ -1.21
SHKBP1-206ENST00000595523 LINC00694P0DN24 101 aa7.49□□□□□ -1.21
SHKBP1-206ENST00000595523 MGST1P10620 155 aaKnown RBP7.49□□□□□ -1.21
SHKBP1-206ENST00000595523 TNP2Q05952 138 aa7.49□□□□□ -1.21
SHKBP1-206ENST00000595523 RHOHQ15669 191 aa7.49□□□□□ -1.21
SHKBP1-206ENST00000595523 TTC32Q5I0X7 151 aa7.49□□□□□ -1.21
SHKBP1-206ENST00000595523 SOHLH1Q5JUK2 328 aa7.49□□□□□ -1.21
SHKBP1-206ENST00000595523 WFDC10BQ8IUB3 73 aa7.49□□□□□ -1.21
SHKBP1-206ENST00000595523 OR10AG1Q8NH19 301 aa7.49□□□□□ -1.21
SHKBP1-206ENST00000595523 PHLDA3Q9Y5J5 127 aa7.49□□□□□ -1.21
SHKBP1-206ENST00000595523 C19orf71A6NCJ1 209 aa7.48□□□□□ -1.21
SHKBP1-206ENST00000595523 SNAI2O43623 268 aa7.48□□□□□ -1.21
SHKBP1-206ENST00000595523 CRYGDP07320 174 aa7.48□□□□□ -1.21
SHKBP1-206ENST00000595523 MED14OSP0DP75 135 aa7.48□□□□□ -1.21
SHKBP1-206ENST00000595523 C14orf178Q8N769 122 aaPredicted RBP7.48□□□□□ -1.21
SHKBP1-206ENST00000595523 SYT8Q8NBV8 401 aa7.48□□□□□ -1.21
SHKBP1-206ENST00000595523 SFRP2Q96HF1 295 aa7.48□□□□□ -1.21
SHKBP1-206ENST00000595523 PRADC1Q9BSG0 188 aa7.48□□□□□ -1.21
SHKBP1-206ENST00000595523 SSBP4Q9BWG4 385 aaPredicted RBP7.48□□□□□ -1.21
SHKBP1-206ENST00000595523 MED9Q9NWA0 146 aa7.48□□□□□ -1.21
SHKBP1-206ENST00000595523 A0A087WWL8 130 aa7.47□□□□□ -1.21
SHKBP1-206ENST00000595523 GNG4P50150 75 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms