RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 TOR2AQ5JU69 321 aa18.01■□□□□ 0.47
TRIM28-204ENST00000594806 PRR27Q6MZM9 219 aa18.01■□□□□ 0.47
TRIM28-204ENST00000594806 POM121L12Q8N7R1 296 aa18.01■□□□□ 0.47
TRIM28-204ENST00000594806 DNAH1Q9P2D7 4330 aa18.01■□□□□ 0.47
TRIM28-204ENST00000594806 TRGV4A0A0C4DH28 118 aa18■□□□□ 0.47
TRIM28-204ENST00000594806 MED14OSP0DP75 135 aa18■□□□□ 0.47
TRIM28-204ENST00000594806 MGST1P10620 155 aaKnown RBP18■□□□□ 0.47
TRIM28-204ENST00000594806 DAZAP1Q96EP5 407 aaKnown RBP18■□□□□ 0.47
TRIM28-204ENST00000594806 ZNF479Q96JC4 524 aa18■□□□□ 0.47
TRIM28-204ENST00000594806 HHLA3Q9XRX5 114 aa18■□□□□ 0.47
TRIM28-204ENST00000594806 TRBV20OR9-2A0A075B6H5 130 aa17.99■□□□□ 0.47
TRIM28-204ENST00000594806 A0A0J9YY99 117 aa17.99■□□□□ 0.47
TRIM28-204ENST00000594806 PGPEP1LA6NFU8 196 aa17.99■□□□□ 0.47
TRIM28-204ENST00000594806 H3BVH4 76 aa17.99■□□□□ 0.47
TRIM28-204ENST00000594806 ARMS2P0C7Q2 107 aa17.99■□□□□ 0.47
TRIM28-204ENST00000594806 ZNF575Q86XF7 245 aa17.99■□□□□ 0.47
TRIM28-204ENST00000594806 SYT8Q8NBV8 401 aa17.99■□□□□ 0.47
TRIM28-204ENST00000594806 GRIFINA4D1Z8 144 aa17.98■□□□□ 0.47
TRIM28-204ENST00000594806 RS1O15537 224 aa17.98■□□□□ 0.47
TRIM28-204ENST00000594806 PAX4O43316 350 aa17.98■□□□□ 0.47
TRIM28-204ENST00000594806 CRYBA4P53673 196 aa17.98■□□□□ 0.47
TRIM28-204ENST00000594806 VSIG2Q96IQ7 327 aa17.98■□□□□ 0.47
TRIM28-204ENST00000594806 PARLQ9H300 379 aa17.98■□□□□ 0.47
TRIM28-204ENST00000594806 SCRT2Q9NQ03 307 aa17.98■□□□□ 0.47
TRIM28-204ENST00000594806 NACAE9PAV3 2078 aa17.97■□□□□ 0.47
TRIM28-204ENST00000594806 TMSB15BA0A087X1C1 80 aa17.97■□□□□ 0.47
TRIM28-204ENST00000594806 A8MWV9 139 aa17.97■□□□□ 0.47
TRIM28-204ENST00000594806 SFTA3P0C7M3 94 aa17.97■□□□□ 0.47
TRIM28-204ENST00000594806 FAM3BP58499 235 aaPredicted RBP17.97■□□□□ 0.47
TRIM28-204ENST00000594806 UBE2DNLQ8IWF7 75 aa17.97■□□□□ 0.47
TRIM28-204ENST00000594806 PHLDA3Q9Y5J5 127 aa17.97■□□□□ 0.47
TRIM28-204ENST00000594806 C19orf71A6NCJ1 209 aa17.95■□□□□ 0.46
TRIM28-204ENST00000594806 CCL18P55774 89 aa17.95■□□□□ 0.46
TRIM28-204ENST00000594806 RPS20P60866 119 aaKnown RBP17.95■□□□□ 0.46
TRIM28-204ENST00000594806 CFAP126Q5VTH2 177 aa17.95■□□□□ 0.46
TRIM28-204ENST00000594806 SMDT1Q9H4I9 107 aa17.95■□□□□ 0.46
TRIM28-204ENST00000594806 XKRY2A2RUG3 117 aa17.93■□□□□ 0.46
TRIM28-204ENST00000594806 P01737 135 aa17.93■□□□□ 0.46
TRIM28-204ENST00000594806 RPL19P84098 196 aaKnown RBP17.93■□□□□ 0.46
TRIM28-204ENST00000594806 ZFP2Q6ZN57 461 aa17.93■□□□□ 0.46
TRIM28-204ENST00000594806 ZFP82Q8N141 532 aa17.93■□□□□ 0.46
TRIM28-204ENST00000594806 ICOSQ9Y6W8 199 aa17.93■□□□□ 0.46
TRIM28-204ENST00000594806 LY96Q9Y6Y9 160 aa17.93■□□□□ 0.46
TRIM28-204ENST00000594806 SRP19P09132 144 aaKnown RBP17.92■□□□□ 0.46
TRIM28-204ENST00000594806 OR5AL1P0C617 328 aa17.92■□□□□ 0.46
TRIM28-204ENST00000594806 MRPL23Q16540 153 aaKnown RBP17.92■□□□□ 0.46
TRIM28-204ENST00000594806 DMRTA1Q5VZB9 504 aa17.92■□□□□ 0.46
TRIM28-204ENST00000594806 OCC1Q8TAD7 63 aa17.92■□□□□ 0.46
TRIM28-204ENST00000594806 PCNPQ8WW12 178 aaKnown RBP17.92■□□□□ 0.46
TRIM28-204ENST00000594806 SSBP4Q9BWG4 385 aaPredicted RBP17.92■□□□□ 0.46
TRIM28-204ENST00000594806 A0A096LPF7 62 aa17.91■□□□□ 0.46
TRIM28-204ENST00000594806 SNAI2O43623 268 aa17.91■□□□□ 0.46
TRIM28-204ENST00000594806 GATA1P15976 413 aaPredicted RBP17.91■□□□□ 0.46
TRIM28-204ENST00000594806 PEA15Q15121 130 aa17.91■□□□□ 0.46
TRIM28-204ENST00000594806 OR2D3Q8NGH3 330 aa17.91■□□□□ 0.46
TRIM28-204ENST00000594806 CEBPGP53567 150 aa17.9■□□□□ 0.46
TRIM28-204ENST00000594806 RAB14P61106 215 aa17.9■□□□□ 0.46
TRIM28-204ENST00000594806 TRBV6-4A0A1B0GX49 114 aa17.89■□□□□ 0.45
TRIM28-204ENST00000594806 RHODO00212 210 aa17.89■□□□□ 0.45
TRIM28-204ENST00000594806 SMIM7Q9BQ49 75 aa17.89■□□□□ 0.45
TRIM28-204ENST00000594806 RYR2Q92736 4967 aa17.88■□□□□ 0.45
TRIM28-204ENST00000594806 FAM74A3Q4VXF1 159 aa17.88■□□□□ 0.45
TRIM28-204ENST00000594806 SFRP2Q96HF1 295 aa17.88■□□□□ 0.45
TRIM28-204ENST00000594806 VPS13DQ5THJ4 4388 aa17.88■□□□□ 0.45
TRIM28-204ENST00000594806 ZNF727A8MUV8 499 aa17.87■□□□□ 0.45
TRIM28-204ENST00000594806 M0R381 172 aa17.87■□□□□ 0.45
TRIM28-204ENST00000594806 NXPH4O95158 308 aa17.87■□□□□ 0.45
TRIM28-204ENST00000594806 SH2D6Q7Z4S9 175 aa17.87■□□□□ 0.45
TRIM28-204ENST00000594806 NUDT10Q8NFP7 164 aa17.87■□□□□ 0.45
TRIM28-204ENST00000594806 NUDT11Q96G61 164 aa17.87■□□□□ 0.45
TRIM28-204ENST00000594806 PRADC1Q9BSG0 188 aa17.87■□□□□ 0.45
TRIM28-204ENST00000594806 RYR3Q15413 4870 aa17.86■□□□□ 0.45
TRIM28-204ENST00000594806 K7EN84 100 aa17.86■□□□□ 0.45
TRIM28-204ENST00000594806 GYPEP15421 78 aa17.86■□□□□ 0.45
TRIM28-204ENST00000594806 RHOHQ15669 191 aa17.86■□□□□ 0.45
TRIM28-204ENST00000594806 NEGR1Q7Z3B1 354 aa17.86■□□□□ 0.45
TRIM28-204ENST00000594806 LINC00588Q9Y4M8 146 aa17.86■□□□□ 0.45
TRIM28-204ENST00000594806 K7EQD1 137 aa17.85■□□□□ 0.45
TRIM28-204ENST00000594806 SRIP30626 198 aa17.85■□□□□ 0.45
TRIM28-204ENST00000594806 FAM231DQ6ZW35 169 aa17.85■□□□□ 0.45
TRIM28-204ENST00000594806 A0A1W2PPQ1 181 aa17.84■□□□□ 0.45
TRIM28-204ENST00000594806 F2Z2F3 143 aa17.84■□□□□ 0.45
TRIM28-204ENST00000594806 IGLC6P0CF74 106 aa17.84■□□□□ 0.45
TRIM28-204ENST00000594806 ESRGQ1W209 222 aa17.84■□□□□ 0.45
TRIM28-204ENST00000594806 SPANXN1Q5VSR9 72 aa17.84■□□□□ 0.45
TRIM28-204ENST00000594806 UFSP1Q6NVU6 142 aa17.84■□□□□ 0.45
TRIM28-204ENST00000594806 SLC25A29Q8N8R3 303 aa17.84■□□□□ 0.45
TRIM28-204ENST00000594806 FER1L6-AS1Q8NA97 138 aa17.84■□□□□ 0.45
TRIM28-204ENST00000594806 OR10AG1Q8NH19 301 aa17.84■□□□□ 0.45
TRIM28-204ENST00000594806 UPK3BQ9BT76 320 aa17.83■□□□□ 0.44
TRIM28-204ENST00000594806 RPP21Q9H633 154 aaKnown RBP17.83■□□□□ 0.44
TRIM28-204ENST00000594806 JPT2Q9H910 190 aa17.83■□□□□ 0.44
TRIM28-204ENST00000594806 IGHV3-73A0A0B4J1V6 119 aa17.82■□□□□ 0.44
TRIM28-204ENST00000594806 CACNG7P62955 275 aa17.82■□□□□ 0.44
TRIM28-204ENST00000594806 RNASE7Q9H1E1 156 aaKnown RBP17.82■□□□□ 0.44
TRIM28-204ENST00000594806 MRPS16Q9Y3D3 137 aaKnown RBP17.82■□□□□ 0.44
TRIM28-204ENST00000594806 KMT2AQ03164 3969 aa17.82■□□□□ 0.44
TRIM28-204ENST00000594806 CRYGDP07320 174 aa17.81■□□□□ 0.44
TRIM28-204ENST00000594806 LINC01551Q86U37 167 aa17.81■□□□□ 0.44
TRIM28-204ENST00000594806 ZNRF2Q8NHG8 242 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms