RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 PIGPP57054 158 aa1.54□□□□□ -2.16
VRK3-204ENST00000593912 PLP1P60201 277 aa1.54□□□□□ -2.16
VRK3-204ENST00000593912 RPL36AP83881 106 aaKnown RBP1.54□□□□□ -2.16
VRK3-204ENST00000593912 ARL6IP1Q15041 203 aa1.54□□□□□ -2.16
VRK3-204ENST00000593912 LGALSLQ3ZCW2 172 aaPredicted RBP1.54□□□□□ -2.16
VRK3-204ENST00000593912 FAM229BQ4G0N7 80 aa1.54□□□□□ -2.16
VRK3-204ENST00000593912 TMEM268Q5VZI3 342 aa1.54□□□□□ -2.16
VRK3-204ENST00000593912 IZUMO2Q6UXV1 221 aa1.54□□□□□ -2.16
VRK3-204ENST00000593912 ZFP2Q6ZN57 461 aa1.54□□□□□ -2.16
VRK3-204ENST00000593912 LHFPL1Q86WI0 220 aa1.54□□□□□ -2.16
VRK3-204ENST00000593912 AQP12AQ8IXF9 295 aa1.54□□□□□ -2.16
VRK3-204ENST00000593912 NUP35Q8NFH5 326 aa1.54□□□□□ -2.16
VRK3-204ENST00000593912 ASB13Q8WXK3 278 aa1.54□□□□□ -2.16
VRK3-204ENST00000593912 RPL36ALQ969Q0 106 aaKnown RBP1.54□□□□□ -2.16
VRK3-204ENST00000593912 SDHCQ99643 169 aaPredicted RBP1.54□□□□□ -2.16
VRK3-204ENST00000593912 ATP5SQ99766 215 aa1.54□□□□□ -2.16
VRK3-204ENST00000593912 CCDC90BQ9GZT6 254 aa1.54□□□□□ -2.16
VRK3-204ENST00000593912 AAMDCQ9H7C9 122 aa1.54□□□□□ -2.16
VRK3-204ENST00000593912 DIABLOQ9NR28 239 aa1.54□□□□□ -2.16
VRK3-204ENST00000593912 PLCXD1Q9NUJ7 323 aa1.54□□□□□ -2.16
VRK3-204ENST00000593912 C11orf21Q9P2W6 132 aa1.54□□□□□ -2.16
VRK3-204ENST00000593912 U3KQ87 197 aa1.54□□□□□ -2.16
VRK3-204ENST00000593912 TRBV19A0A075B6N1 114 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 TRAV18A0A075B6X5 111 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 A0A0A6YYH2 397 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 TCRBV3S1A0A5B6 114 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 SMCO3A2RU48 225 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 A6NJ64 397 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 IFITM5A6NNB3 132 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 A8MWV9 139 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 PRSS46E5RG02 174 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 AGPAT2O15120 278 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 GYG2O15488 501 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 RGS10O43665 173 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 APOMO95445 188 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 HIST1H1EP10412 219 aaKnown RBP1.53□□□□□ -2.16
VRK3-204ENST00000593912 RNASE3P12724 160 aaKnown RBP1.53□□□□□ -2.16
VRK3-204ENST00000593912 CAMPP49913 170 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 PKIAP61925 76 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 PIK3CD-AS1Q5SR53 167 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 SPAG11AQ6PDA7 123 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 Q8N9P0 234 aaPredicted RBP1.53□□□□□ -2.16
VRK3-204ENST00000593912 CHCHD10Q8WYQ3 142 aaPredicted RBP1.53□□□□□ -2.16
VRK3-204ENST00000593912 TMEM80Q96HE8 168 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 ATP6V1G3Q96LB4 118 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 BCL7BQ9BQE9 202 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 FKBP14Q9NWM8 211 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 NDUFA12Q9UI09 145 aa1.53□□□□□ -2.16
VRK3-204ENST00000593912 IGLV4-69A0A075B6H9 119 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 TRAV6A0A075B6T7 132 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 C3orf85A0A1B0GTC6 90 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 EFCAB10A6NFE3 127 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 ERICH4A6NGS2 130 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 ZNF561-AS1K7EIQ3 104 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 MYL12BO14950 172 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 PYYP10082 97 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 RPL28P46779 137 aaKnown RBP1.52□□□□□ -2.17
VRK3-204ENST00000593912 S100A10P60903 97 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 SLC38A11Q08AI6 406 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 TRAM1Q15629 374 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 C4orf48Q5BLP8 95 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 KRTAP5-2Q701N4 177 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 Q8N377 158 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 Q8NBF4 154 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 DIRAS2Q96HU8 199 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 DERL1Q9BUN8 251 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 IFT46Q9NQC8 304 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 UQCC1Q9NVA1 299 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 PRELID1Q9Y255 219 aa1.52□□□□□ -2.17
VRK3-204ENST00000593912 TRBV25-1A0A075B6N4 114 aa1.51□□□□□ -2.17
VRK3-204ENST00000593912 TRAV21A0A0B4J279 112 aa1.51□□□□□ -2.17
VRK3-204ENST00000593912 IGHV1-58A0A0C4DH39 117 aa1.51□□□□□ -2.17
VRK3-204ENST00000593912 TRBV7-9A0A0J9YWB2 115 aa1.51□□□□□ -2.17
VRK3-204ENST00000593912 RHODO00212 210 aa1.51□□□□□ -2.17
VRK3-204ENST00000593912 COX7A2P2O60397 106 aa1.51□□□□□ -2.17
VRK3-204ENST00000593912 XCL1P47992 114 aa1.51□□□□□ -2.17
VRK3-204ENST00000593912 RND3P61587 244 aa1.51□□□□□ -2.17
VRK3-204ENST00000593912 RAB11AP62491 216 aa1.51□□□□□ -2.17
VRK3-204ENST00000593912 FABP5Q01469 135 aa1.51□□□□□ -2.17
VRK3-204ENST00000593912 GAGE2EQ4V326 116 aa1.51□□□□□ -2.17
VRK3-204ENST00000593912 SELENOHQ8IZQ5 122 aaKnown RBP1.51□□□□□ -2.17
VRK3-204ENST00000593912 PTH2Q96A98 100 aa1.51□□□□□ -2.17
VRK3-204ENST00000593912 C20orf166-AS1Q96NR2 134 aa1.51□□□□□ -2.17
VRK3-204ENST00000593912 AQP10Q96PS8 301 aa1.51□□□□□ -2.17
VRK3-204ENST00000593912 CAMK2N2Q96S95 79 aa1.51□□□□□ -2.17
VRK3-204ENST00000593912 NAA60Q9H7X0 242 aa1.51□□□□□ -2.17
VRK3-204ENST00000593912 GAGE2DQ9UEU5 116 aa1.51□□□□□ -2.17
VRK3-204ENST00000593912 TIMM9Q9Y5J7 89 aa1.51□□□□□ -2.17
VRK3-204ENST00000593912 IGHV1-24A0A0C4DH33 117 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 TRBV10-1A0A0K0K1A3 114 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 TRBV6-1A0A0K0K1D8 114 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 A0A1B0GUV1 79 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 C19orf71A6NCJ1 209 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 H3BP45 60 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 NUPR1O60356 82 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 BCE1O60756 84 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 B3GALNT1O75752 331 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 ARL6IP5O75915 188 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 SULT1A3P0DMM9 295 aa1.5□□□□□ -2.17
VRK3-204ENST00000593912 SULT1A4P0DMN0 295 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms