RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 FLI1Q01543 452 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-226ENST00000591534 MORN5Q5VZ52 161 aa6.67□□□□□ -1.34
BRCA1-226ENST00000591534 KCNIP4Q6PIL6 250 aa6.67□□□□□ -1.34
BRCA1-226ENST00000591534 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.67□□□□□ -1.34
BRCA1-226ENST00000591534 C1orf158Q8N1D5 194 aa6.67□□□□□ -1.34
BRCA1-226ENST00000591534 ZNF738Q8NE65 137 aa6.67□□□□□ -1.34
BRCA1-226ENST00000591534 ODF3Q96PU9 254 aa6.67□□□□□ -1.34
BRCA1-226ENST00000591534 IMMP2LQ96T52 175 aa6.67□□□□□ -1.34
BRCA1-226ENST00000591534 FAT2Q9NYQ8 4349 aa6.66□□□□□ -1.34
BRCA1-226ENST00000591534 TRAV9-1A0A075B6T8 112 aa6.66□□□□□ -1.34
BRCA1-226ENST00000591534 C16orf90A8MZG2 172 aa6.66□□□□□ -1.34
BRCA1-226ENST00000591534 LTAP01374 205 aa6.66□□□□□ -1.34
BRCA1-226ENST00000591534 PRB4P10163 310 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-226ENST00000591534 Q6AWC8 147 aa6.66□□□□□ -1.34
BRCA1-226ENST00000591534 C9orf47Q6ZRZ4 202 aa6.66□□□□□ -1.34
BRCA1-226ENST00000591534 TMEM183AQ8IXX5 376 aa6.66□□□□□ -1.34
BRCA1-226ENST00000591534 TMEM256Q8N2U0 113 aa6.66□□□□□ -1.34
BRCA1-226ENST00000591534 SDF2L1Q9HCN8 221 aa6.66□□□□□ -1.34
BRCA1-226ENST00000591534 SMCO4Q9NRQ5 59 aa6.66□□□□□ -1.34
BRCA1-226ENST00000591534 DNAH2Q9P225 4427 aa6.66□□□□□ -1.34
BRCA1-226ENST00000591534 FAM231BA6NCW3 169 aa6.65□□□□□ -1.34
BRCA1-226ENST00000591534 F5H768 121 aa6.65□□□□□ -1.34
BRCA1-226ENST00000591534 F6UB75 175 aa6.65□□□□□ -1.34
BRCA1-226ENST00000591534 CDK2AP2O75956 126 aa6.65□□□□□ -1.34
BRCA1-226ENST00000591534 NUDT3O95989 172 aa6.65□□□□□ -1.34
BRCA1-226ENST00000591534 ATP5G1P05496 136 aa6.65□□□□□ -1.34
BRCA1-226ENST00000591534 DEFB130BP0DP73 79 aa6.65□□□□□ -1.34
BRCA1-226ENST00000591534 DEFB130AP0DP74 79 aa6.65□□□□□ -1.34
BRCA1-226ENST00000591534 LEPP41159 167 aa6.65□□□□□ -1.34
BRCA1-226ENST00000591534 ZNF138P52744 262 aa6.65□□□□□ -1.34
BRCA1-226ENST00000591534 RPS20P60866 119 aaKnown RBP6.65□□□□□ -1.34
BRCA1-226ENST00000591534 ADIRFQ15847 76 aa6.65□□□□□ -1.34
BRCA1-226ENST00000591534 COX19Q49B96 90 aa6.65□□□□□ -1.34
BRCA1-226ENST00000591534 SMUG1Q53HV7 270 aa6.65□□□□□ -1.34
BRCA1-226ENST00000591534 CENPWQ5EE01 88 aa6.65□□□□□ -1.34
BRCA1-226ENST00000591534 GOLT1AQ6ZVE7 132 aa6.65□□□□□ -1.34
BRCA1-226ENST00000591534 FAM231DQ6ZW35 169 aa6.65□□□□□ -1.34
BRCA1-226ENST00000591534 COX8CQ7Z4L0 72 aa6.65□□□□□ -1.34
BRCA1-226ENST00000591534 ZNF575Q86XF7 245 aa6.65□□□□□ -1.34
BRCA1-226ENST00000591534 C6orf223Q8N319 242 aa6.65□□□□□ -1.34
BRCA1-226ENST00000591534 DNAH17Q9UFH2 4485 aa6.64□□□□□ -1.35
BRCA1-226ENST00000591534 NBDYA0A0U1RRE5 68 aa6.64□□□□□ -1.35
BRCA1-226ENST00000591534 CBY3A6NI87 242 aa6.64□□□□□ -1.35
BRCA1-226ENST00000591534 A8MTW9 85 aa6.64□□□□□ -1.35
BRCA1-226ENST00000591534 H7BYZ3 331 aa6.64□□□□□ -1.35
BRCA1-226ENST00000591534 ERVFC1-1P60608 527 aa6.64□□□□□ -1.35
BRCA1-226ENST00000591534 FAM162BQ5T6X4 162 aa6.64□□□□□ -1.35
BRCA1-226ENST00000591534 IGFL4Q6B9Z1 124 aa6.64□□□□□ -1.35
BRCA1-226ENST00000591534 LINC01551Q86U37 167 aa6.64□□□□□ -1.35
BRCA1-226ENST00000591534 EXOC3-AS1Q8N2X6 119 aa6.64□□□□□ -1.35
BRCA1-226ENST00000591534 SFRP2Q96HF1 295 aa6.64□□□□□ -1.35
BRCA1-226ENST00000591534 LINC01587Q99440 93 aa6.64□□□□□ -1.35
BRCA1-226ENST00000591534 RPS10P5Q9NQ39 176 aa6.64□□□□□ -1.35
BRCA1-226ENST00000591534 OSTCQ9NRP0 149 aa6.64□□□□□ -1.35
BRCA1-226ENST00000591534 ZNF492Q9P255 531 aa6.64□□□□□ -1.35
BRCA1-226ENST00000591534 RPH3ALQ9UNE2 315 aa6.64□□□□□ -1.35
BRCA1-226ENST00000591534 PSG8Q9UQ74 426 aa6.64□□□□□ -1.35
BRCA1-226ENST00000591534 ZNF705GA8MUZ8 300 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-226ENST00000591534 A8MWL6 223 aa6.63□□□□□ -1.35
BRCA1-226ENST00000591534 GCGP01275 180 aa6.63□□□□□ -1.35
BRCA1-226ENST00000591534 P01737 135 aa6.63□□□□□ -1.35
BRCA1-226ENST00000591534 S100A8P05109 93 aa6.63□□□□□ -1.35
BRCA1-226ENST00000591534 MGST1P10620 155 aaKnown RBP6.63□□□□□ -1.35
BRCA1-226ENST00000591534 HIST1H1AQ02539 215 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-226ENST00000591534 SPINK13Q1W4C9 94 aa6.63□□□□□ -1.35
BRCA1-226ENST00000591534 TTC32Q5I0X7 151 aa6.63□□□□□ -1.35
BRCA1-226ENST00000591534 IBA57Q5T440 356 aaKnown RBP6.63□□□□□ -1.35
BRCA1-226ENST00000591534 AMTNQ6UX39 209 aa6.63□□□□□ -1.35
BRCA1-226ENST00000591534 ZNF493Q6ZR52 646 aa6.63□□□□□ -1.35
BRCA1-226ENST00000591534 Q86TA4 180 aa6.63□□□□□ -1.35
BRCA1-226ENST00000591534 OR8A1Q8NGG7 326 aa6.63□□□□□ -1.35
BRCA1-226ENST00000591534 OR10G8Q8NGN5 311 aa6.63□□□□□ -1.35
BRCA1-226ENST00000591534 BORCS7Q96B45 105 aa6.63□□□□□ -1.35
BRCA1-226ENST00000591534 C16orf74Q96GX8 76 aa6.63□□□□□ -1.35
BRCA1-226ENST00000591534 C20orf144Q9BQM9 153 aa6.63□□□□□ -1.35
BRCA1-226ENST00000591534 GFRA4Q9GZZ7 299 aa6.63□□□□□ -1.35
BRCA1-226ENST00000591534 TIMM8BQ9Y5J9 83 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-226ENST00000591534 TRAV8-2A0A0B4J237 113 aa6.62□□□□□ -1.35
BRCA1-226ENST00000591534 C7orf77A4D0Y5 90 aa6.62□□□□□ -1.35
BRCA1-226ENST00000591534 FABP5P3A8MUU1 101 aa6.62□□□□□ -1.35
BRCA1-226ENST00000591534 M0R2Z0 102 aa6.62□□□□□ -1.35
BRCA1-226ENST00000591534 SLC17A3O00476 420 aa6.62□□□□□ -1.35
BRCA1-226ENST00000591534 SNRPCP09234 159 aaKnown RBP6.62□□□□□ -1.35
BRCA1-226ENST00000591534 RPL23P62829 140 aaKnown RBP6.62□□□□□ -1.35
BRCA1-226ENST00000591534 PRNTQ86SH4 94 aa6.62□□□□□ -1.35
BRCA1-226ENST00000591534 ZNRF2Q8NHG8 242 aa6.62□□□□□ -1.35
BRCA1-226ENST00000591534 ISOC2Q96AB3 205 aa6.62□□□□□ -1.35
BRCA1-226ENST00000591534 PKD1P98161 4303 aa6.61□□□□□ -1.35
BRCA1-226ENST00000591534 TRAV21A0A0B4J279 112 aa6.61□□□□□ -1.35
BRCA1-226ENST00000591534 A0A1B0GW15 77 aa6.61□□□□□ -1.35
BRCA1-226ENST00000591534 A0A1W2PPQ1 181 aa6.61□□□□□ -1.35
BRCA1-226ENST00000591534 C9JQL5 133 aa6.61□□□□□ -1.35
BRCA1-226ENST00000591534 HTN1P15515 57 aa6.61□□□□□ -1.35
BRCA1-226ENST00000591534 ADCYAP1P18509 176 aa6.61□□□□□ -1.35
BRCA1-226ENST00000591534 RASL11AQ6T310 242 aa6.61□□□□□ -1.35
BRCA1-226ENST00000591534 RNF182Q8N6D2 247 aa6.61□□□□□ -1.35
BRCA1-226ENST00000591534 MAPKAPK5-AS1Q8N8E1 139 aa6.61□□□□□ -1.35
BRCA1-226ENST00000591534 OCC1Q8TAD7 63 aa6.61□□□□□ -1.35
BRCA1-226ENST00000591534 KCNS1Q96KK3 526 aa6.61□□□□□ -1.35
BRCA1-226ENST00000591534 DNAH11Q96DT5 4516 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms