RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 MLST8Q9BVC4 326 aa12.52□□□□□ -0.41
DDX39A-212ENST00000590260 Q9H8V8 135 aa12.52□□□□□ -0.41
DDX39A-212ENST00000590260 ICOSQ9Y6W8 199 aa12.52□□□□□ -0.41
DDX39A-212ENST00000590260 K7EQD1 137 aa12.51□□□□□ -0.41
DDX39A-212ENST00000590260 GATA1P15976 413 aaPredicted RBP12.51□□□□□ -0.41
DDX39A-212ENST00000590260 SLAQ13239 276 aa12.51□□□□□ -0.41
DDX39A-212ENST00000590260 DNLZQ5SXM8 178 aa12.51□□□□□ -0.41
DDX39A-212ENST00000590260 PKHD1P08F94 4074 aa12.5□□□□□ -0.41
DDX39A-212ENST00000590260 M0R036 132 aa12.5□□□□□ -0.41
DDX39A-212ENST00000590260 RAB5CP51148 216 aa12.5□□□□□ -0.41
DDX39A-212ENST00000590260 LYPD5Q6UWN5 251 aa12.5□□□□□ -0.41
DDX39A-212ENST00000590260 LINC00336Q6ZUF6 198 aa12.5□□□□□ -0.41
DDX39A-212ENST00000590260 DERL1Q9BUN8 251 aa12.5□□□□□ -0.41
DDX39A-212ENST00000590260 GNG13Q9P2W3 67 aa12.5□□□□□ -0.41
DDX39A-212ENST00000590260 GRIFINA4D1Z8 144 aa12.49□□□□□ -0.41
DDX39A-212ENST00000590260 PRSS29PA6NIE9 313 aa12.49□□□□□ -0.41
DDX39A-212ENST00000590260 B4DEV8 164 aa12.49□□□□□ -0.41
DDX39A-212ENST00000590260 ORM1P02763 201 aa12.49□□□□□ -0.41
DDX39A-212ENST00000590260 GYPEP15421 78 aa12.49□□□□□ -0.41
DDX39A-212ENST00000590260 JPT2Q9H910 190 aa12.49□□□□□ -0.41
DDX39A-212ENST00000590260 LINC01559Q495D7 138 aa12.48□□□□□ -0.41
DDX39A-212ENST00000590260 FAM162BQ5T6X4 162 aa12.48□□□□□ -0.41
DDX39A-212ENST00000590260 Q6ZSN1 163 aa12.48□□□□□ -0.41
DDX39A-212ENST00000590260 C11orf52Q96A22 123 aa12.48□□□□□ -0.41
DDX39A-212ENST00000590260 MANBALQ9NQG1 85 aa12.48□□□□□ -0.41
DDX39A-212ENST00000590260 IL36BQ9NZH7 164 aa12.48□□□□□ -0.41
DDX39A-212ENST00000590260 IGHV3-73A0A0B4J1V6 119 aa12.47□□□□□ -0.41
DDX39A-212ENST00000590260 H3BVH4 76 aa12.47□□□□□ -0.41
DDX39A-212ENST00000590260 ASIPP42127 132 aa12.47□□□□□ -0.41
DDX39A-212ENST00000590260 MRPL23Q16540 153 aaKnown RBP12.47□□□□□ -0.41
DDX39A-212ENST00000590260 C1orf134Q5TEV5 83 aa12.47□□□□□ -0.41
DDX39A-212ENST00000590260 EIF5AL1Q6IS14 154 aaKnown RBP12.47□□□□□ -0.41
DDX39A-212ENST00000590260 UFSP1Q6NVU6 142 aa12.47□□□□□ -0.41
DDX39A-212ENST00000590260 SLC25A29Q8N8R3 303 aa12.47□□□□□ -0.41
DDX39A-212ENST00000590260 SCRT2Q9NQ03 307 aa12.47□□□□□ -0.41
DDX39A-212ENST00000590260 TMSB15BA0A087X1C1 80 aa12.46□□□□□ -0.41
DDX39A-212ENST00000590260 IGLV2-8P01709 118 aa12.46□□□□□ -0.41
DDX39A-212ENST00000590260 ARMS2P0C7Q2 107 aa12.46□□□□□ -0.41
DDX39A-212ENST00000590260 RPL35P42766 123 aaKnown RBP12.46□□□□□ -0.41
DDX39A-212ENST00000590260 NKX2-5P52952 324 aaPredicted RBP12.46□□□□□ -0.41
DDX39A-212ENST00000590260 RPL19P84098 196 aaKnown RBP12.46□□□□□ -0.41
DDX39A-212ENST00000590260 DMRTA1Q5VZB9 504 aa12.46□□□□□ -0.41
DDX39A-212ENST00000590260 SAMD10Q9BYL1 202 aa12.46□□□□□ -0.41
DDX39A-212ENST00000590260 NXPH4O95158 308 aa12.45□□□□□ -0.42
DDX39A-212ENST00000590260 S100A9P06702 114 aaKnown RBP12.45□□□□□ -0.42
DDX39A-212ENST00000590260 NEGR1Q7Z3B1 354 aa12.45□□□□□ -0.42
DDX39A-212ENST00000590260 BAGE2Q86Y30 109 aa12.45□□□□□ -0.42
DDX39A-212ENST00000590260 C6orf223Q8N319 242 aa12.45□□□□□ -0.42
DDX39A-212ENST00000590260 PARLQ9H300 379 aa12.45□□□□□ -0.42
DDX39A-212ENST00000590260 Q9UF83 564 aa12.45□□□□□ -0.42
DDX39A-212ENST00000590260 BOLA1Q9Y3E2 137 aa12.45□□□□□ -0.42
DDX39A-212ENST00000590260 S100A4P26447 101 aaKnown RBP12.44□□□□□ -0.42
DDX39A-212ENST00000590260 TNP2Q05952 138 aa12.44□□□□□ -0.42
DDX39A-212ENST00000590260 TRBV6-4A0A1B0GX49 114 aa12.43□□□□□ -0.42
DDX39A-212ENST00000590260 SRIP30626 198 aa12.43□□□□□ -0.42
DDX39A-212ENST00000590260 PIK3CD-AS1Q5SR53 167 aa12.43□□□□□ -0.42
DDX39A-212ENST00000590260 ALKAL2Q6UX46 152 aa12.43□□□□□ -0.42
DDX39A-212ENST00000590260 HERC2O95714 4834 aa12.42□□□□□ -0.42
DDX39A-212ENST00000590260 TRBV20OR9-2A0A075B6H5 130 aa12.42□□□□□ -0.42
DDX39A-212ENST00000590260 RAB19A4D1S5 217 aa12.42□□□□□ -0.42
DDX39A-212ENST00000590260 SIVA1O15304 175 aa12.42□□□□□ -0.42
DDX39A-212ENST00000590260 MEF2BQ02080 365 aaPredicted RBP12.42□□□□□ -0.42
DDX39A-212ENST00000590260 WFDC10BQ8IUB3 73 aa12.42□□□□□ -0.42
DDX39A-212ENST00000590260 A0A1W2PPQ1 181 aa12.41□□□□□ -0.42
DDX39A-212ENST00000590260 CIDEAO60543 219 aa12.41□□□□□ -0.42
DDX39A-212ENST00000590260 BCL2P10415 239 aa12.41□□□□□ -0.42
DDX39A-212ENST00000590260 CENPWQ5EE01 88 aa12.41□□□□□ -0.42
DDX39A-212ENST00000590260 A8MWV9 139 aa12.4□□□□□ -0.42
DDX39A-212ENST00000590260 LINC00694P0DN24 101 aa12.4□□□□□ -0.42
DDX39A-212ENST00000590260 PRR27Q6MZM9 219 aa12.4□□□□□ -0.42
DDX39A-212ENST00000590260 ZFP2Q6ZN57 461 aa12.4□□□□□ -0.42
DDX39A-212ENST00000590260 PCNPQ8WW12 178 aaKnown RBP12.4□□□□□ -0.42
DDX39A-212ENST00000590260 TXNDC17Q9BRA2 123 aa12.4□□□□□ -0.42
DDX39A-212ENST00000590260 KIAA1109Q2LD37 5005 aa12.4□□□□□ -0.42
DDX39A-212ENST00000590260 CRYGDP07320 174 aa12.39□□□□□ -0.43
DDX39A-212ENST00000590260 RHOHQ15669 191 aa12.39□□□□□ -0.43
DDX39A-212ENST00000590260 TTC32Q5I0X7 151 aa12.39□□□□□ -0.43
DDX39A-212ENST00000590260 Q6ZRN7 208 aaPredicted RBP12.39□□□□□ -0.43
DDX39A-212ENST00000590260 C14orf178Q8N769 122 aaPredicted RBP12.39□□□□□ -0.43
DDX39A-212ENST00000590260 LYPD6BQ8NI32 183 aa12.39□□□□□ -0.43
DDX39A-212ENST00000590260 SFRP2Q96HF1 295 aa12.39□□□□□ -0.43
DDX39A-212ENST00000590260 TNFRSF18Q9Y5U5 241 aa12.39□□□□□ -0.43
DDX39A-212ENST00000590260 TEX46H3BTG2 121 aa12.38□□□□□ -0.43
DDX39A-212ENST00000590260 CXCL1P09341 107 aa12.38□□□□□ -0.43
DDX39A-212ENST00000590260 MGST1P10620 155 aaKnown RBP12.38□□□□□ -0.43
DDX39A-212ENST00000590260 LINC00315P59091 139 aa12.38□□□□□ -0.43
DDX39A-212ENST00000590260 SOHLH1Q5JUK2 328 aa12.38□□□□□ -0.43
DDX39A-212ENST00000590260 OR10AG1Q8NH19 301 aa12.38□□□□□ -0.43
DDX39A-212ENST00000590260 SSBP4Q9BWG4 385 aaPredicted RBP12.38□□□□□ -0.43
DDX39A-212ENST00000590260 A0A087WWL8 130 aa12.37□□□□□ -0.43
DDX39A-212ENST00000590260 C19orf71A6NCJ1 209 aa12.37□□□□□ -0.43
DDX39A-212ENST00000590260 M0R381 172 aa12.37□□□□□ -0.43
DDX39A-212ENST00000590260 SNAI2O43623 268 aa12.37□□□□□ -0.43
DDX39A-212ENST00000590260 MED14OSP0DP75 135 aa12.37□□□□□ -0.43
DDX39A-212ENST00000590260 TIRAPP58753 221 aa12.37□□□□□ -0.43
DDX39A-212ENST00000590260 VAX2Q9UIW0 290 aa12.37□□□□□ -0.43
DDX39A-212ENST00000590260 PHLDA3Q9Y5J5 127 aa12.37□□□□□ -0.43
DDX39A-212ENST00000590260 PDE6DO43924 150 aa12.36□□□□□ -0.43
DDX39A-212ENST00000590260 IFNA1P01562 189 aa12.36□□□□□ -0.43
DDX39A-212ENST00000590260 SYT8Q8NBV8 401 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms