RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 SMIM12Q96EX1 92 aa6.78□□□□□ -1.32
APOC1-204ENST00000589078 C9orf85Q96MD7 179 aa6.78□□□□□ -1.32
APOC1-204ENST00000589078 BIN3Q9NQY0 253 aa6.78□□□□□ -1.32
APOC1-204ENST00000589078 PRO0255Q9UI72 69 aa6.78□□□□□ -1.32
APOC1-204ENST00000589078 IGKV3D-20A0A0C4DH25 116 aa6.77□□□□□ -1.33
APOC1-204ENST00000589078 A0A0J9YY99 117 aa6.77□□□□□ -1.33
APOC1-204ENST00000589078 RBFOX3A6NFN3 312 aa6.77□□□□□ -1.33
APOC1-204ENST00000589078 KRBOX1C9JBD0 128 aa6.77□□□□□ -1.33
APOC1-204ENST00000589078 PAX4O43316 350 aa6.77□□□□□ -1.33
APOC1-204ENST00000589078 CIDEAO60543 219 aa6.77□□□□□ -1.33
APOC1-204ENST00000589078 MED14OSP0DP75 135 aa6.77□□□□□ -1.33
APOC1-204ENST00000589078 CRIP1P50238 77 aa6.77□□□□□ -1.33
APOC1-204ENST00000589078 CCL18P55774 89 aa6.77□□□□□ -1.33
APOC1-204ENST00000589078 FAM3BP58499 235 aaPredicted RBP6.77□□□□□ -1.33
APOC1-204ENST00000589078 RNF212Q495C1 297 aa6.77□□□□□ -1.33
APOC1-204ENST00000589078 LINC01559Q495D7 138 aa6.77□□□□□ -1.33
APOC1-204ENST00000589078 PIK3CD-AS1Q5SR53 167 aa6.77□□□□□ -1.33
APOC1-204ENST00000589078 PRR27Q6MZM9 219 aa6.77□□□□□ -1.33
APOC1-204ENST00000589078 LYPD6BQ8NI32 183 aa6.77□□□□□ -1.33
APOC1-204ENST00000589078 PCNPQ8WW12 178 aaKnown RBP6.77□□□□□ -1.33
APOC1-204ENST00000589078 PTH2Q96A98 100 aa6.77□□□□□ -1.33
APOC1-204ENST00000589078 DAZAP1Q96EP5 407 aaKnown RBP6.77□□□□□ -1.33
APOC1-204ENST00000589078 MLST8Q9BVC4 326 aa6.77□□□□□ -1.33
APOC1-204ENST00000589078 IL36BQ9NZH7 164 aa6.77□□□□□ -1.33
APOC1-204ENST00000589078 HHLA3Q9XRX5 114 aa6.77□□□□□ -1.33
APOC1-204ENST00000589078 HERC1Q15751 4861 aa6.76□□□□□ -1.33
APOC1-204ENST00000589078 TMSB15BA0A087X1C1 80 aa6.76□□□□□ -1.33
APOC1-204ENST00000589078 TMEM250H0YL14 139 aa6.76□□□□□ -1.33
APOC1-204ENST00000589078 H3BVH4 76 aa6.76□□□□□ -1.33
APOC1-204ENST00000589078 MGST1P10620 155 aaKnown RBP6.76□□□□□ -1.33
APOC1-204ENST00000589078 DERL1Q9BUN8 251 aa6.76□□□□□ -1.33
APOC1-204ENST00000589078 KRTAP4-5Q9BYR2 181 aa6.76□□□□□ -1.33
APOC1-204ENST00000589078 EIF5A2Q9GZV4 153 aaKnown RBP6.76□□□□□ -1.33
APOC1-204ENST00000589078 PHLDA3Q9Y5J5 127 aa6.76□□□□□ -1.33
APOC1-204ENST00000589078 ICOSQ9Y6W8 199 aa6.76□□□□□ -1.33
APOC1-204ENST00000589078 HSPG2P98160 4391 aa6.75□□□□□ -1.33
APOC1-204ENST00000589078 XKRY2A2RUG3 117 aa6.75□□□□□ -1.33
APOC1-204ENST00000589078 A8MWV9 139 aa6.75□□□□□ -1.33
APOC1-204ENST00000589078 CXCL1P09341 107 aa6.75□□□□□ -1.33
APOC1-204ENST00000589078 RNASE3P12724 160 aaKnown RBP6.75□□□□□ -1.33
APOC1-204ENST00000589078 FHL2Q14192 279 aa6.75□□□□□ -1.33
APOC1-204ENST00000589078 ZNF506Q5JVG8 444 aa6.75□□□□□ -1.33
APOC1-204ENST00000589078 DNLZQ5SXM8 178 aa6.75□□□□□ -1.33
APOC1-204ENST00000589078 TEX261Q6UWH6 196 aa6.75□□□□□ -1.33
APOC1-204ENST00000589078 ZNF479Q96JC4 524 aa6.75□□□□□ -1.33
APOC1-204ENST00000589078 A0A1B0GVY2 172 aa6.74□□□□□ -1.33
APOC1-204ENST00000589078 RAB19A4D1S5 217 aa6.74□□□□□ -1.33
APOC1-204ENST00000589078 GRIFINA4D1Z8 144 aa6.74□□□□□ -1.33
APOC1-204ENST00000589078 RS1O15537 224 aa6.74□□□□□ -1.33
APOC1-204ENST00000589078 NDUFS6O75380 124 aaKnown RBP6.74□□□□□ -1.33
APOC1-204ENST00000589078 SFTA3P0C7M3 94 aa6.74□□□□□ -1.33
APOC1-204ENST00000589078 ARMS2P0C7Q2 107 aa6.74□□□□□ -1.33
APOC1-204ENST00000589078 CRYBA4P53673 196 aa6.74□□□□□ -1.33
APOC1-204ENST00000589078 RPS20P60866 119 aaKnown RBP6.74□□□□□ -1.33
APOC1-204ENST00000589078 MRPL23Q16540 153 aaKnown RBP6.74□□□□□ -1.33
APOC1-204ENST00000589078 TOR2AQ5JU69 321 aa6.74□□□□□ -1.33
APOC1-204ENST00000589078 CFAP126Q5VTH2 177 aa6.74□□□□□ -1.33
APOC1-204ENST00000589078 ZFP82Q8N141 532 aa6.74□□□□□ -1.33
APOC1-204ENST00000589078 VSIG2Q96IQ7 327 aa6.74□□□□□ -1.33
APOC1-204ENST00000589078 PGPEP1LA6NFU8 196 aa6.73□□□□□ -1.33
APOC1-204ENST00000589078 RHODO00212 210 aa6.73□□□□□ -1.33
APOC1-204ENST00000589078 P01737 135 aa6.73□□□□□ -1.33
APOC1-204ENST00000589078 SRIP30626 198 aa6.73□□□□□ -1.33
APOC1-204ENST00000589078 CEBPGP53567 150 aa6.73□□□□□ -1.33
APOC1-204ENST00000589078 ZFP2Q6ZN57 461 aa6.73□□□□□ -1.33
APOC1-204ENST00000589078 SH2D6Q7Z4S9 175 aa6.73□□□□□ -1.33
APOC1-204ENST00000589078 FAM210AQ96ND0 272 aa6.73□□□□□ -1.33
APOC1-204ENST00000589078 PRADC1Q9BSG0 188 aa6.73□□□□□ -1.33
APOC1-204ENST00000589078 A0A096LPF7 62 aa6.72□□□□□ -1.33
APOC1-204ENST00000589078 M0R381 172 aa6.72□□□□□ -1.33
APOC1-204ENST00000589078 GYPEP15421 78 aa6.72□□□□□ -1.33
APOC1-204ENST00000589078 GATA1P15976 413 aaPredicted RBP6.72□□□□□ -1.33
APOC1-204ENST00000589078 RAB14P61106 215 aa6.72□□□□□ -1.33
APOC1-204ENST00000589078 RHOHQ15669 191 aa6.72□□□□□ -1.33
APOC1-204ENST00000589078 LINC00336Q6ZUF6 198 aa6.72□□□□□ -1.33
APOC1-204ENST00000589078 OR2D3Q8NGH3 330 aa6.72□□□□□ -1.33
APOC1-204ENST00000589078 PARLQ9H300 379 aa6.72□□□□□ -1.33
APOC1-204ENST00000589078 SCRT2Q9NQ03 307 aa6.72□□□□□ -1.33
APOC1-204ENST00000589078 TRBV20OR9-2A0A075B6H5 130 aa6.71□□□□□ -1.34
APOC1-204ENST00000589078 TRBV6-4A0A1B0GX49 114 aa6.71□□□□□ -1.34
APOC1-204ENST00000589078 IGLV2-8P01709 118 aa6.71□□□□□ -1.34
APOC1-204ENST00000589078 OR5AL1P0C617 328 aa6.71□□□□□ -1.34
APOC1-204ENST00000589078 RPL19P84098 196 aaKnown RBP6.71□□□□□ -1.34
APOC1-204ENST00000589078 PEA15Q15121 130 aa6.71□□□□□ -1.34
APOC1-204ENST00000589078 SPANXN1Q5VSR9 72 aa6.71□□□□□ -1.34
APOC1-204ENST00000589078 DMRTA1Q5VZB9 504 aa6.71□□□□□ -1.34
APOC1-204ENST00000589078 NEGR1Q7Z3B1 354 aa6.71□□□□□ -1.34
APOC1-204ENST00000589078 LINC00588Q9Y4M8 146 aa6.71□□□□□ -1.34
APOC1-204ENST00000589078 IGHV3-73A0A0B4J1V6 119 aa6.7□□□□□ -1.34
APOC1-204ENST00000589078 A0A1W2PPQ1 181 aa6.7□□□□□ -1.34
APOC1-204ENST00000589078 C19orf71A6NCJ1 209 aa6.7□□□□□ -1.34
APOC1-204ENST00000589078 K7EQD1 137 aa6.7□□□□□ -1.34
APOC1-204ENST00000589078 SNAI2O43623 268 aa6.7□□□□□ -1.34
APOC1-204ENST00000589078 FER1L6-AS1Q8NA97 138 aa6.7□□□□□ -1.34
APOC1-204ENST00000589078 SMIM7Q9BQ49 75 aa6.7□□□□□ -1.34
APOC1-204ENST00000589078 UPK3BQ9BT76 320 aa6.7□□□□□ -1.34
APOC1-204ENST00000589078 TPPP3Q9BW30 176 aa6.7□□□□□ -1.34
APOC1-204ENST00000589078 SMDT1Q9H4I9 107 aa6.7□□□□□ -1.34
APOC1-204ENST00000589078 MRPS16Q9Y3D3 137 aaKnown RBP6.7□□□□□ -1.34
APOC1-204ENST00000589078 LY96Q9Y6Y9 160 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms