RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 GAGE12JA6NER3 117 aa11.17□□□□□ -0.62
LINC01842-201ENST00000588275 GAGE1Q13065 139 aa11.17□□□□□ -0.62
LINC01842-201ENST00000588275 GAGE4Q13068 117 aa11.17□□□□□ -0.62
LINC01842-201ENST00000588275 GAGE5Q13069 117 aa11.17□□□□□ -0.62
LINC01842-201ENST00000588275 LAGE3Q14657 143 aa11.17□□□□□ -0.62
LINC01842-201ENST00000588275 GAGE13Q4V321 117 aa11.17□□□□□ -0.62
LINC01842-201ENST00000588275 SMUG1Q53HV7 270 aa11.17□□□□□ -0.62
LINC01842-201ENST00000588275 HSD17B11Q8NBQ5 300 aa11.17□□□□□ -0.62
LINC01842-201ENST00000588275 MARVELD1Q9BSK0 173 aa11.17□□□□□ -0.62
LINC01842-201ENST00000588275 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.16□□□□□ -0.62
LINC01842-201ENST00000588275 STAG3L2P0CL84 134 aa11.16□□□□□ -0.62
LINC01842-201ENST00000588275 STAG3L3P0CL85 134 aa11.16□□□□□ -0.62
LINC01842-201ENST00000588275 FLI1Q01543 452 aaPredicted RBP11.16□□□□□ -0.62
LINC01842-201ENST00000588275 RNASE3P12724 160 aaKnown RBP11.15□□□□□ -0.62
LINC01842-201ENST00000588275 S100A4P26447 101 aaKnown RBP11.15□□□□□ -0.62
LINC01842-201ENST00000588275 GCHFRP30047 84 aa11.15□□□□□ -0.62
LINC01842-201ENST00000588275 SUMO1P63165 101 aaKnown RBP11.15□□□□□ -0.62
LINC01842-201ENST00000588275 LGALSLQ3ZCW2 172 aaPredicted RBP11.15□□□□□ -0.62
LINC01842-201ENST00000588275 PLA2G1BP04054 148 aaKnown RBP11.14□□□□□ -0.63
LINC01842-201ENST00000588275 DAZ4Q86SG3 579 aaKnown RBP11.14□□□□□ -0.63
LINC01842-201ENST00000588275 LINC00528Q8N1L1 170 aa11.14□□□□□ -0.63
LINC01842-201ENST00000588275 CYB561D1Q8N8Q1 229 aa11.14□□□□□ -0.63
LINC01842-201ENST00000588275 OR2T35Q8NGX2 323 aa11.14□□□□□ -0.63
LINC01842-201ENST00000588275 RAB24Q969Q5 203 aa11.14□□□□□ -0.63
LINC01842-201ENST00000588275 PARLQ9H300 379 aa11.14□□□□□ -0.63
LINC01842-201ENST00000588275 DAZ3Q9NR90 486 aaKnown RBP11.14□□□□□ -0.63
LINC01842-201ENST00000588275 TRAV8-3A0A0A6YYJ7 113 aa11.13□□□□□ -0.63
LINC01842-201ENST00000588275 GGTLC3B5MD39 225 aa11.13□□□□□ -0.63
LINC01842-201ENST00000588275 IGLV2-11P01706 119 aa11.13□□□□□ -0.63
LINC01842-201ENST00000588275 C1QBP02746 253 aa11.13□□□□□ -0.63
LINC01842-201ENST00000588275 DEFA1P59665 94 aa11.13□□□□□ -0.63
LINC01842-201ENST00000588275 DEFA3P59666 94 aa11.13□□□□□ -0.63
LINC01842-201ENST00000588275 SH3BGRL3Q9H299 93 aa11.13□□□□□ -0.63
LINC01842-201ENST00000588275 EPDR1Q9UM22 224 aa11.13□□□□□ -0.63
LINC01842-201ENST00000588275 A8MWV9 139 aa11.12□□□□□ -0.63
LINC01842-201ENST00000588275 TOR2AQ5JU69 321 aa11.12□□□□□ -0.63
LINC01842-201ENST00000588275 OR2G3Q8NGZ4 309 aa11.12□□□□□ -0.63
LINC01842-201ENST00000588275 PTH2Q96A98 100 aa11.12□□□□□ -0.63
LINC01842-201ENST00000588275 TMEM167BQ9NRX6 74 aa11.12□□□□□ -0.63
LINC01842-201ENST00000588275 TRAV34A0A0B4J273 112 aa11.11□□□□□ -0.63
LINC01842-201ENST00000588275 ATP6V0CP27449 155 aa11.11□□□□□ -0.63
LINC01842-201ENST00000588275 ASIPP42127 132 aa11.11□□□□□ -0.63
LINC01842-201ENST00000588275 LINC01620Q4KN68 170 aa11.11□□□□□ -0.63
LINC01842-201ENST00000588275 SAPCD1Q5SSQ6 148 aa11.11□□□□□ -0.63
LINC01842-201ENST00000588275 ZFP2Q6ZN57 461 aa11.11□□□□□ -0.63
LINC01842-201ENST00000588275 BAALCQ8WXS3 180 aa11.11□□□□□ -0.63
LINC01842-201ENST00000588275 JPT2Q9H910 190 aa11.11□□□□□ -0.63
LINC01842-201ENST00000588275 IGKV3D-20A0A0C4DH25 116 aa11.1□□□□□ -0.63
LINC01842-201ENST00000588275 CXorf1O96002 111 aa11.1□□□□□ -0.63
LINC01842-201ENST00000588275 C14orf178Q8N769 122 aaPredicted RBP11.1□□□□□ -0.63
LINC01842-201ENST00000588275 SUN5Q8TC36 379 aa11.1□□□□□ -0.63
LINC01842-201ENST00000588275 LINC00479Q96M42 142 aa11.1□□□□□ -0.63
LINC01842-201ENST00000588275 PSMG3Q9BT73 122 aaPredicted RBP11.1□□□□□ -0.63
LINC01842-201ENST00000588275 SAMD10Q9BYL1 202 aa11.1□□□□□ -0.63
LINC01842-201ENST00000588275 Q9UF83 564 aa11.1□□□□□ -0.63
LINC01842-201ENST00000588275 URGCP-MRPS24S4R325 110 aa11.1□□□□□ -0.63
LINC01842-201ENST00000588275 H3BVH4 76 aa11.09□□□□□ -0.63
LINC01842-201ENST00000588275 MBP02144 154 aa11.09□□□□□ -0.63
LINC01842-201ENST00000588275 LINC00694P0DN24 101 aa11.09□□□□□ -0.63
LINC01842-201ENST00000588275 Q6ZSA8 131 aa11.09□□□□□ -0.63
LINC01842-201ENST00000588275 ACTR3CQ9C0K3 210 aaPredicted RBP11.09□□□□□ -0.63
LINC01842-201ENST00000588275 ARL2-SNX15V9GYD0 113 aa11.09□□□□□ -0.63
LINC01842-201ENST00000588275 IGKV2D-24A0A075B6R9 120 aa11.08□□□□□ -0.64
LINC01842-201ENST00000588275 A0A087WWC5 75 aa11.08□□□□□ -0.64
LINC01842-201ENST00000588275 RBFOX3A6NFN3 312 aa11.08□□□□□ -0.64
LINC01842-201ENST00000588275 IFNA7P01567 189 aa11.08□□□□□ -0.64
LINC01842-201ENST00000588275 FGF8P55075 233 aaPredicted RBP11.08□□□□□ -0.64
LINC01842-201ENST00000588275 FAM74A4Q5TZK3 123 aa11.08□□□□□ -0.64
LINC01842-201ENST00000588275 RMI2Q96E14 147 aa11.08□□□□□ -0.64
LINC01842-201ENST00000588275 FABP5P3A8MUU1 101 aa11.07□□□□□ -0.64
LINC01842-201ENST00000588275 B4DEV8 164 aa11.07□□□□□ -0.64
LINC01842-201ENST00000588275 UBE2G2P60604 165 aa11.07□□□□□ -0.64
LINC01842-201ENST00000588275 SCXQ7RTU7 201 aa11.07□□□□□ -0.64
LINC01842-201ENST00000588275 SYT8Q8NBV8 401 aa11.07□□□□□ -0.64
LINC01842-201ENST00000588275 DNAJC30Q96LL9 226 aa11.07□□□□□ -0.64
LINC01842-201ENST00000588275 ALG5Q9Y673 324 aa11.07□□□□□ -0.64
LINC01842-201ENST00000588275 COX11Q9Y6N1 276 aa11.07□□□□□ -0.64
LINC01842-201ENST00000588275 M0R036 132 aa11.06□□□□□ -0.64
LINC01842-201ENST00000588275 SERF2P84101 59 aa11.06□□□□□ -0.64
LINC01842-201ENST00000588275 DMRTA1Q5VZB9 504 aa11.06□□□□□ -0.64
LINC01842-201ENST00000588275 Q86TA4 180 aa11.06□□□□□ -0.64
LINC01842-201ENST00000588275 DEFB104AQ8WTQ1 72 aa11.06□□□□□ -0.64
LINC01842-201ENST00000588275 IL36BQ9NZH7 164 aa11.06□□□□□ -0.64
LINC01842-201ENST00000588275 KLK12Q9UKR0 248 aa11.06□□□□□ -0.64
LINC01842-201ENST00000588275 A0A1W2PRE2 83 aa11.05□□□□□ -0.64
LINC01842-201ENST00000588275 GRIFINA4D1Z8 144 aa11.05□□□□□ -0.64
LINC01842-201ENST00000588275 RHODO00212 210 aa11.05□□□□□ -0.64
LINC01842-201ENST00000588275 PIK3CD-AS1Q5SR53 167 aa11.05□□□□□ -0.64
LINC01842-201ENST00000588275 UFSP1Q6NVU6 142 aa11.05□□□□□ -0.64
LINC01842-201ENST00000588275 OR11H4Q8NGC9 324 aa11.05□□□□□ -0.64
LINC01842-201ENST00000588275 UBE2WQ96B02 151 aa11.05□□□□□ -0.64
LINC01842-201ENST00000588275 AQP10Q96PS8 301 aa11.05□□□□□ -0.64
LINC01842-201ENST00000588275 TNFSF18Q9UNG2 199 aa11.05□□□□□ -0.64
LINC01842-201ENST00000588275 A0A087WWL8 130 aa11.04□□□□□ -0.64
LINC01842-201ENST00000588275 KRTAP29-1A8MX34 341 aaPredicted RBP11.04□□□□□ -0.64
LINC01842-201ENST00000588275 PEX7O00628 323 aa11.04□□□□□ -0.64
LINC01842-201ENST00000588275 ARMS2P0C7Q2 107 aa11.04□□□□□ -0.64
LINC01842-201ENST00000588275 SEC11BP0C7V7 166 aa11.04□□□□□ -0.64
LINC01842-201ENST00000588275 KCNIP4Q6PIL6 250 aa11.04□□□□□ -0.64
LINC01842-201ENST00000588275 NIT1Q86X76 327 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms