RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 GAGE13Q4V321 117 aa9.4□□□□□ -0.9
ERCC1-205ENST00000587888 SMUG1Q53HV7 270 aa9.4□□□□□ -0.9
ERCC1-205ENST00000587888 C5orf17Q8NAS9 161 aa9.4□□□□□ -0.9
ERCC1-205ENST00000587888 HSD17B11Q8NBQ5 300 aa9.4□□□□□ -0.9
ERCC1-205ENST00000587888 OR2T35Q8NGX2 323 aa9.4□□□□□ -0.9
ERCC1-205ENST00000587888 RAB24Q969Q5 203 aa9.4□□□□□ -0.9
ERCC1-205ENST00000587888 IGLV2-11P01706 119 aa9.39□□□□□ -0.91
ERCC1-205ENST00000587888 RNASE3P12724 160 aaKnown RBP9.39□□□□□ -0.91
ERCC1-205ENST00000587888 FLI1Q01543 452 aaPredicted RBP9.39□□□□□ -0.91
ERCC1-205ENST00000587888 LAGE3Q14657 143 aa9.39□□□□□ -0.91
ERCC1-205ENST00000587888 ZFP69Q49AA0 526 aa9.39□□□□□ -0.91
ERCC1-205ENST00000587888 PTH2Q96A98 100 aa9.39□□□□□ -0.91
ERCC1-205ENST00000587888 EPDR1Q9UM22 224 aa9.39□□□□□ -0.91
ERCC1-205ENST00000587888 HERC1Q15751 4861 aa9.39□□□□□ -0.91
ERCC1-205ENST00000587888 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.38□□□□□ -0.91
ERCC1-205ENST00000587888 S100A4P26447 101 aaKnown RBP9.38□□□□□ -0.91
ERCC1-205ENST00000587888 LGALSLQ3ZCW2 172 aaPredicted RBP9.38□□□□□ -0.91
ERCC1-205ENST00000587888 DAZ4Q86SG3 579 aaKnown RBP9.38□□□□□ -0.91
ERCC1-205ENST00000587888 DAZ3Q9NR90 486 aaKnown RBP9.38□□□□□ -0.91
ERCC1-205ENST00000587888 TRAV8-3A0A0A6YYJ7 113 aa9.37□□□□□ -0.91
ERCC1-205ENST00000587888 C1QBP02746 253 aa9.37□□□□□ -0.91
ERCC1-205ENST00000587888 PLA2G1BP04054 148 aaKnown RBP9.37□□□□□ -0.91
ERCC1-205ENST00000587888 DEFA1P59665 94 aa9.37□□□□□ -0.91
ERCC1-205ENST00000587888 DEFA3P59666 94 aa9.37□□□□□ -0.91
ERCC1-205ENST00000587888 SAPCD1Q5SSQ6 148 aa9.37□□□□□ -0.91
ERCC1-205ENST00000587888 SUN5Q8TC36 379 aa9.37□□□□□ -0.91
ERCC1-205ENST00000587888 BAALCQ8WXS3 180 aa9.37□□□□□ -0.91
ERCC1-205ENST00000587888 LINC00479Q96M42 142 aa9.37□□□□□ -0.91
ERCC1-205ENST00000587888 SAMD10Q9BYL1 202 aa9.37□□□□□ -0.91
ERCC1-205ENST00000587888 PARLQ9H300 379 aa9.37□□□□□ -0.91
ERCC1-205ENST00000587888 JPT2Q9H910 190 aa9.37□□□□□ -0.91
ERCC1-205ENST00000587888 Q9UF83 564 aa9.37□□□□□ -0.91
ERCC1-205ENST00000587888 DMBT1Q9UGM3 2413 aaPredicted RBP9.37□□□□□ -0.91
ERCC1-205ENST00000587888 FLG2Q5D862 2391 aaPredicted RBP9.37□□□□□ -0.91
ERCC1-205ENST00000587888 SRRM2Q9UQ35 2752 aaKnown RBP9.36□□□□□ -0.91
ERCC1-205ENST00000587888 TRAV34A0A0B4J273 112 aa9.36□□□□□ -0.91
ERCC1-205ENST00000587888 IGKV3D-20A0A0C4DH25 116 aa9.36□□□□□ -0.91
ERCC1-205ENST00000587888 GGTLC3B5MD39 225 aa9.36□□□□□ -0.91
ERCC1-205ENST00000587888 CXorf1O96002 111 aa9.36□□□□□ -0.91
ERCC1-205ENST00000587888 ATP6V0CP27449 155 aa9.36□□□□□ -0.91
ERCC1-205ENST00000587888 LINC01620Q4KN68 170 aa9.36□□□□□ -0.91
ERCC1-205ENST00000587888 CYB561D1Q8N8Q1 229 aa9.36□□□□□ -0.91
ERCC1-205ENST00000587888 OR2G3Q8NGZ4 309 aa9.36□□□□□ -0.91
ERCC1-205ENST00000587888 SH3BGRL3Q9H299 93 aa9.36□□□□□ -0.91
ERCC1-205ENST00000587888 A8MWV9 139 aa9.35□□□□□ -0.91
ERCC1-205ENST00000587888 ASIPP42127 132 aa9.35□□□□□ -0.91
ERCC1-205ENST00000587888 TOR2AQ5JU69 321 aa9.35□□□□□ -0.91
ERCC1-205ENST00000587888 ZFP2Q6ZN57 461 aa9.35□□□□□ -0.91
ERCC1-205ENST00000587888 LINC00528Q8N1L1 170 aa9.35□□□□□ -0.91
ERCC1-205ENST00000587888 C14orf178Q8N769 122 aaPredicted RBP9.35□□□□□ -0.91
ERCC1-205ENST00000587888 ACTR3CQ9C0K3 210 aaPredicted RBP9.35□□□□□ -0.91
ERCC1-205ENST00000587888 TMEM167BQ9NRX6 74 aa9.35□□□□□ -0.91
ERCC1-205ENST00000587888 VPS13BQ7Z7G8 4022 aa9.34□□□□□ -0.91
ERCC1-205ENST00000587888 FABP5P3A8MUU1 101 aa9.34□□□□□ -0.91
ERCC1-205ENST00000587888 IFNA7P01567 189 aa9.34□□□□□ -0.91
ERCC1-205ENST00000587888 MBP02144 154 aa9.34□□□□□ -0.91
ERCC1-205ENST00000587888 FGF8P55075 233 aaPredicted RBP9.34□□□□□ -0.91
ERCC1-205ENST00000587888 PSMG3Q9BT73 122 aaPredicted RBP9.34□□□□□ -0.91
ERCC1-205ENST00000587888 A0A087WWC5 75 aa9.33□□□□□ -0.92
ERCC1-205ENST00000587888 RBFOX3A6NFN3 312 aa9.33□□□□□ -0.92
ERCC1-205ENST00000587888 B4DEV8 164 aa9.33□□□□□ -0.92
ERCC1-205ENST00000587888 LINC00694P0DN24 101 aa9.33□□□□□ -0.92
ERCC1-205ENST00000587888 SERF2P84101 59 aa9.33□□□□□ -0.92
ERCC1-205ENST00000587888 DMRTA1Q5VZB9 504 aa9.33□□□□□ -0.92
ERCC1-205ENST00000587888 Q6ZSA8 131 aa9.33□□□□□ -0.92
ERCC1-205ENST00000587888 DNAJC30Q96LL9 226 aa9.33□□□□□ -0.92
ERCC1-205ENST00000587888 URGCP-MRPS24S4R325 110 aa9.33□□□□□ -0.92
ERCC1-205ENST00000587888 ARL2-SNX15V9GYD0 113 aa9.33□□□□□ -0.92
ERCC1-205ENST00000587888 UBE2G2P60604 165 aa9.32□□□□□ -0.92
ERCC1-205ENST00000587888 UFSP1Q6NVU6 142 aa9.32□□□□□ -0.92
ERCC1-205ENST00000587888 TNFSF18Q9UNG2 199 aa9.32□□□□□ -0.92
ERCC1-205ENST00000587888 ALG5Q9Y673 324 aa9.32□□□□□ -0.92
ERCC1-205ENST00000587888 COX11Q9Y6N1 276 aa9.32□□□□□ -0.92
ERCC1-205ENST00000587888 FAT1Q14517 4588 aa9.31□□□□□ -0.92
ERCC1-205ENST00000587888 IGKV2D-24A0A075B6R9 120 aa9.31□□□□□ -0.92
ERCC1-205ENST00000587888 A0A1W2PRE2 83 aa9.31□□□□□ -0.92
ERCC1-205ENST00000587888 GRIFINA4D1Z8 144 aa9.31□□□□□ -0.92
ERCC1-205ENST00000587888 A6NHS1 94 aa9.31□□□□□ -0.92
ERCC1-205ENST00000587888 H3BVH4 76 aa9.31□□□□□ -0.92
ERCC1-205ENST00000587888 M0R036 132 aa9.31□□□□□ -0.92
ERCC1-205ENST00000587888 ARMS2P0C7Q2 107 aa9.31□□□□□ -0.92
ERCC1-205ENST00000587888 PIK3CD-AS1Q5SR53 167 aa9.31□□□□□ -0.92
ERCC1-205ENST00000587888 FAM74A4Q5TZK3 123 aa9.31□□□□□ -0.92
ERCC1-205ENST00000587888 Q8N976 141 aa9.31□□□□□ -0.92
ERCC1-205ENST00000587888 SYT8Q8NBV8 401 aa9.31□□□□□ -0.92
ERCC1-205ENST00000587888 DEFB104AQ8WTQ1 72 aa9.31□□□□□ -0.92
ERCC1-205ENST00000587888 RMI2Q96E14 147 aa9.31□□□□□ -0.92
ERCC1-205ENST00000587888 AQP10Q96PS8 301 aa9.31□□□□□ -0.92
ERCC1-205ENST00000587888 IL36BQ9NZH7 164 aa9.31□□□□□ -0.92
ERCC1-205ENST00000587888 KLK12Q9UKR0 248 aa9.31□□□□□ -0.92
ERCC1-205ENST00000587888 A0A087WWL8 130 aa9.3□□□□□ -0.92
ERCC1-205ENST00000587888 KRTAP29-1A8MX34 341 aaPredicted RBP9.3□□□□□ -0.92
ERCC1-205ENST00000587888 CRIP1P50238 77 aa9.3□□□□□ -0.92
ERCC1-205ENST00000587888 Q5BKY6 102 aa9.3□□□□□ -0.92
ERCC1-205ENST00000587888 NIT1Q86X76 327 aa9.3□□□□□ -0.92
ERCC1-205ENST00000587888 RNF222A6NCQ9 220 aa9.29□□□□□ -0.92
ERCC1-205ENST00000587888 KRBOX1C9JBD0 128 aa9.29□□□□□ -0.92
ERCC1-205ENST00000587888 PEX7O00628 323 aa9.29□□□□□ -0.92
ERCC1-205ENST00000587888 ZNF726P1Q15940 193 aa9.29□□□□□ -0.92
ERCC1-205ENST00000587888 RPL7L1Q6DKI1 246 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms